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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5184#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1028 fasta sequence
[CCGGGTAAATAAACAACCGCCAGCCGGTTACATCAAAGCGGCATTTTCTCTCCACTAATTTTCCTGTGAGTTCGATAAAAAAAACCCTTTGATGTTGGCTAGCACACGAACATTTCAGCTCAAGGCAAGACTCAAAACATTGCTGCGACAG-CTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACACAGCGTGCTGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAGTACAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGATGGGAGCGATGCTTTCGCGCTCCTCCGTCCAGACCCGTCTGACGAGCGAGTCCGGCATGAGCTTTACCGAGTTTTCCTACCAGCTGTTCCAGGCGTACGATTGGTTGCATCTGTTGCGCCACAC-AATTGCCGGTTTCAGCTCGGCGGCTCGGACCAGATGGGCAACATCATGTCCGGCCAGGAGCTGATCAGCCGCACAGACGGGAAGGAAGTGTTCGGGCTGACACTGCCCCTCGTCACCAACGAGGAGGGCGACAAGTTCGGCAAGTCGGCGGGCAATGCGGTGTGGCTGTCGGACGACCGCACCTCGCCGTATGCGCTGTACCACTACTTCGTCCGTACGCCCGACTCGGAGGTGGAGAAGCTGTTGCGACTGCTCACCTTTCTGCCGGTG]
[+] EMBL BM636507 [CCGGGTAAATAAACAACCGCCAGCCGGTTACATCAAAGCGGCATTTTCTCTCCACTAATTTTCCTGTGAGTTCGATAAAAAAAACCCTTTGATGTTGGCTAGCACACGAACATTTCAGCTCAAGGCAAGACTCAAAACATTGCTGCGACAGCCTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGTTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACACAGCGTGCTGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAGTACAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGATGGGAGCGATGCTTTCGC ]
[+] EMBL CNS08KL3 [ CCGGTTACATCAAAGCGGCATTTTCTCTCCACTAATTTTCCTGTGAGTTCGAT AAAAAAACCCTTTGATGTTGGCTAGAACACGAACATTTCAGCTCAAGGCAAGACTCAAAACATTGCTGCGACAC CTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACGCAGCGTGCTGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAGTACAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGATGGGAGCGATGCTTTCGCGCTCCTCCGTCCAGACCCGTCTGACGAGCGAGTCCGGCATGAGCTTTACCGAGTTTTCCTACCAGCTGTTCCAGGCGTACGATTGGTTGCATCTGTTGCGCCACAC AATTGCCGGTTTCAGCTCGGCGGCTCGGACCAGATGGGCAACATCATGTCCGGCCAGGAGCTGATCAGCCGCACAGACGGGAAGGAAGTGTTCGGGCTGACACTGCCCCTCGTCACCAACGAGGAGGGCGACAAGTTCGGCAAGTCGGCGGGCAATGCGGTGTGGCTGTCGGACGACCGCACCTCGCCGTATGCGCTGTACCACTACT ]
[+] EMBL CNS08YSL [ TAAAAAAAACCCTTTGATGTTGGCTAGCACACGAACATTTCATCTCAAGGCAAGACTCAAAACATTGCTGCGACAG CTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACACAGCGTGCTGGCCACCAACCGATCGCGCTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCAAAAAAAGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAGTTCAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGATGGGAGCGATGCTTTCGCGCTCCTCCGTCCAGACCCGTCTGACGAGCGAGTCCGGCATGAGCTTTACCGAGTTTTCCTACCAGCTGTTCCAGGCGTACGATTGGTTGCATCTGTTGCGCCACACAAATTGCCGGTTTCAGCTCGGCGGCTCGGACCAGATGGGCAACATCATGTCCGGCCAGGAGCTGATCAGCCGCACAGACGGGAAGGAAGTGTTCGGGCTGACACTGCCCCTCGTCACCAACGAGGAGGGCGACAAGTTCGGCAAGTCGGCGGGCAATGCGGTGTGGCTGTCGGACGACCGCACCTCGCCGTATGCGATGTACCAGTTCTTCGTCCGTACGCCCGACTCGGAGGTGGAGAAGCTGTTGCGACTGCTCACCTTTCTGCCGGTG]
consensusID : consensus_5184#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 898 fasta sequence
[CCAGAATCGNNCACGAGGAGCACACGAACATTTCAGCTCAAGGCAAGACTCAAAACATTGCTGCGACAGCCTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACGCAGCGTGCTGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAATACAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGGATGGGAGCGATGCTTTCGCGCTCCTCCGTCCAGACCCCGTCTGACGAGCGAGTCCGGGCATGAGCTTTACCGGAGTTTTCCTACCAGCTGGTTCCAGGCGTTCCGATTGGTGTGCATCCTGTTGCGCCCAGGCACAATTGCCGGNTTCANGCTCGGGCGGGTTCNGACCANATGGGGCNAACATTCCAATGGTTCCGGGCCAGGGAACTGATCNAGGCCGGACNCNACACGGGGAAACGGAAAGTGGTCCGGGGCTAACACTGGCCCTTCGTTACCAACNAGGAGGGCAACAANTTTCGGGCAAGTGNCGGCGNGCCAATCNGCGGTTGGCTCTTCGCNAGACCG]
[+] EMBL BX467331 [CCAGAATCGNNCACGAGGAGCACACGAACATTTCAGCTCAAGGCAAGACTCAAAACATTGCTGCGACAGCCTGCACGATGGTACACAGAGCGAAACATTTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAAAGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGCCAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACGCAGCGTGCTGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGGCCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCATCAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAGTTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAATACAGCTTCGTCGATTTCATGGCGAACGTCGGCCGCCACTTTCGGGATGGGAGCGATGCTTTCGCGCTCCTCCGTCCAGACCCCGTCTGACGAGCGAGTCCGGGCATGAGCTTTACCGGAGTTTTCCTACCAGCTGGTTCCAGGCGTTCCGATTGGTGTGCATCCTGTTGCGCCCAGGCACAATTGCCGGNTTCANGCTCGGGCGGGTTCNGACCANATGGGGCNAACATTCCAATGGTTCCGGGCCAGGGAACTGATCNAGGCCGGACNCNACACGGGGAAACGGAAAGTGGTCCGGGGCTAACACTGGCCCTTCGTTACCAACNAGGAGGGCAACAANTTTCGGGCAAGTGNCGGCGNGCCAATCNGCGGTTGGCTCTTCGCNAGACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5184#0 CCGGGTAAATAAACAACCGCCAGCCGGTTACATCAAAGCGGCATTTTCTCTCCACTAATT 60
consensus_5184#1 ------------------------------------------------------------
consensus_5184#0 TTCCTGTGAGTTCGATAAAAAAAACCCTTTGATGTTGGCTAGCACACGAACATTTCAGCT 120
consensus_5184#1 ------------------CCAGAA----TCGNNCACGAGGAGCACACGAACATTTCAGCT 38
* ** * * * ********************
consensus_5184#0 CAAGGCAAGACTCAAAACATTGCTGCGACAGC-TGCACGATGGTACACAGAGCGAAACAT 179
consensus_5184#1 CAAGGCAAGACTCAAAACATTGCTGCGACAGCCTGCACGATGGTACACAGAGCGAAACAT 98
******************************** ***************************
consensus_5184#0 TTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAA 239
consensus_5184#1 TTTAAAGCTGAGAGACCGCGGTTTCATACAGGACGTTTTCCCAGCGGAAACGATTGATAA 158
************************************************************
consensus_5184#0 AGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGC 299
consensus_5184#1 AGCCAGCTCGATGTTAGGCTCCACCTGCCAGACAGTGTATGCCGGGTTCGATCCAACCGC 218
************************************************************
consensus_5184#0 CAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACACAGCGTGC 359
consensus_5184#1 CAACAGTCTGCACGTGGGCAATCTTCTGGTGCTGATCGGGCTGTTGCACACGCAGCGTGC 278
*************************************************** ********
consensus_5184#0 TGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGG 419
consensus_5184#1 TGGCCACCAACCGATCGCACTGGTTGGCGGTGCTACCGGGCTGATCGGAGACCCTTCCGG 338
************************************************************
consensus_5184#0 CCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCAT 479
consensus_5184#1 CCGCAAAACCGAGCGACAACAGCTCGAAACGGAAGCGGTAGAGCACAACGTGACCTGCAT 398
************************************************************
consensus_5184#0 CAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAG 539
consensus_5184#1 CAGGCGGCAAATAGAGACGATTTTCGCGAACCACGAGCGCTTCTTCTGGGACCGACCTAG 458
************************************************************
consensus_5184#0 TTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAGTACAGCTTCGT 599
consensus_5184#1 TTCGCTGAAACCGGTGCTGGTGGTGAACAATGCGGACTGGTACCGGCAATACAGCTTCGT 518
************************************************ ***********
consensus_5184#0 CGATTTCATGGCGAACGTCGGCCGCCACTTTCGG-ATGGGAGCGATGCTTTCGCGCTCCT 658
consensus_5184#1 CGATTTCATGGCGAACGTCGGCCGCCACTTTCGGGATGGGAGCGATGCTTTCGCGCTCCT 578
********************************** *************************
consensus_5184#0 CCGTCCAGACCC-GTCTGACGAGCGAGTCCGG-CATGAGCTTTACCG-AGTTTTCCTACC 715
consensus_5184#1 CCGTCCAGACCCCGTCTGACGAGCGAGTCCGGGCATGAGCTTTACCGGAGTTTTCCTACC 638
************ ******************* ************** ************
consensus_5184#0 AGCTG-TTCCAGGCGTAC-GATTGGT-TGCATC-TGTTGCGCC---ACACAATTGCCGGT 768
consensus_5184#1 AGCTGGTTCCAGGCGTTCCGATTGGTGTGCATCCTGTTGCGCCCAGGCACAATTGCCGGN 698
***** ********** * ******* ****** ********* ************
consensus_5184#0 TTCAG-CTCGGC--GGCTCGGACCAGATGGG--CAACATC------ATGTCCGGCCAGG- 816
consensus_5184#1 TTCANGCTCGGGCGGGTTCNGACCANATGGGGCNAACATTCCAATGGTTCCGGGCCAGGG 758
**** ***** ** ** ***** ***** ***** * * *******
consensus_5184#0 AGCTGATCA---------GCCGCACAGACGGGAAGGAAGTGTTC--GGGCTGACACTG-C 864
consensus_5184#1 AACTGATCNAGGCCGGACNCNACACGGGGAAACGGAAAGTGGTCCGGGGCTAACACTGGC 818
* ****** * *** * * ***** ** ***** ****** *
consensus_5184#0 CCCTCGTCACCAACGAGGAGGGCGACAAGTTCGGCAAGTCGGCGGGCAATGCGGTGTGGC 924
consensus_5184#1 CCTTCGTTACCAACNAGGAGGGCAACAANTTTCG------GGCAAGTG--NCGGCGNGCC 870
** **** ****** ******** **** ** * *** * *** * * *
consensus_5184#0 TGTCGGACGACCGCACCTCGCCGTATGCGCTGTACCACTACTTCGTCCGTACGCCCGACT 984
consensus_5184#1 AATCNGCGGTTGGCTCTTCGCNAGAC-CG------------------------------- 898
** * * ** * **** * **
consensus_5184#0 CGGAGGTGGAGAAGCTGTTGCGACTGCTCACCTTTCTGCCGGTG 1028
consensus_5184#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||