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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5269#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 891 fasta sequence
[ACTTTCAGGCTAAAGAAAAACAGAAGCCAATCAACGATTTAGAATAAAGTTTTCTCCAAACGTGCTCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGTGAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGTCGTTCTCAAGCGTTGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCCGCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGCGCCGCTAGTGCCGACAACAACCGACAAGCGCAAGAAGAANGTTACCGTGCAGCTCGATTCGGCCTCGGCTGAAGACGATCAGGAGGATGAAGAGCAGGTGAGCTTCGGTACGCGTCGTGGCGGNTCGGNCGGTCGTCCCGCCGGAAGATCCGCTGGACCCATGTTCCCCGTTACGTTTGGCAGCACCAATGGCGGTGCGATCGCTATTGCTAACAGCTACAGTACNGGAAAGGGTGGATCGGCTACCAGCCATGCCACCGCTTA]
[+] EMBL BX624525 [ACTTTCAGGCTAAAGAAAAACAGAAGCCAATCAACGATTTAGAATAAAGTTTTCTCCAAACGTGCTCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGTGAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGTCGTTCTCAAGCGTTGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCCGCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGCGCCGCTAGTGCCGACAACAACCGACAAGCGCAAGAAGAANGTTACCGTGCAGCTCGATTCGGCCTCGGCTGAAGACGATCAGGAGGATGAAGAGCAGGTGAGCTTCGGTACGCGTCGTGGCGGNTCGGNCGGTCGTCCCGCCGGAAGAT ]
[+] EMBL BX620300 [ ATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGNAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGCGCCGCTAGTGCCGACGACAACCGACAAGCGCAAGAAGAAGGTTACCGTGCAGCTCGATTCGGCCTCGGCTGAAGACGATCAGGAGGATGAAGAACAGGTGAGCTTCGGTACGCGTCGTGGCGGTTCGGCCGGTCGTCCCGCCGGAGGGTCCGCTGGACCCATGTTCCCCGTTACGTTTGGCAGCACCAATGGCGGTGCGATCGCTATTGCTAACAGCTACAGTACNGGAAAGGGTGGATCGGCTACCAGCCATGCCACCGCTTA]
consensusID : consensus_5269#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 814 fasta sequence
[CAGAATCGCGCACGAGGAACGATTTAGAATAAAGTTTTCTCCAAACGTTCCCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGTGAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGCCGTTCTCAAGCGTTGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCCGCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGCTGACTGCCGACCCGCAGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGGGCCGCTAGTGCCGACGACAACCGACAAGCGCAAGAAGGAAGGTTACCGTGCAGCTCGATTCGGGCCTCGGCTGAAGACGNATCAGGAGGATGCAAGAAACAGGTGAGGCTTTCGGTACGGCGTCAGTGGGCGGTTCCGGCCGGTCGTCCGCCGGAAGGGTCCGNTGGACCCNATGTTCCCCGGT]
[+] EMBL BX467630 [CAGAATCGCGCACGAGGAACGATTTAGAATAAAGTTTTCTCCAAACGTTCCCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGTGAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGCCGTTCTCAAGCGTTGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCCGCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGCTGACTGCCGACCCGCAGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGGGCCGCTAGTGCCGACGACAACCGACAAGCGCAAGAAGGAAGGTTACCGTGCAGCTCGATTCGGGCCTCGGCTGAAGACGNATCAGGAGGATGCAAGAAACAGGTGAGGCTTTCGGTACGGCGTCAGTGGGCGGTTCCGGCCGGTCGTCCGCCGGAAGGGTCCGNTGGACCCNATGTTCCCCGGT]
[+] EMBL BX627912 [ GTGTAGTGCGTGTGGCATACATTTAGGCGTCATGCCGTTCTCAAGCGTTGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCCGCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCAGCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCAACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGGTACGATTCTCAAGGCTGACTGCCGACCCGCAGATCCTGCTGTGGAGGGTTACCCTTCGGTGCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAGCGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCTAGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGCGCCGCTAGTGNCGACGACNACCGACAAGCGCAAGAA GAAGGTTACCGTGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5269#0 ACTTTCAGGCTAAAGAAAAACAGAAGCCAATCAACGATTTAGAATAAAGTTTTCTCCAAA 60
consensus_5269#1 ---------------CAGAATCGCGCACGAGGAACGATTTAGAATAAAGTTTTCTCCAAA 45
* ** * * * ****************************
consensus_5269#0 CGTGCTCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGT 120
consensus_5269#1 CGTTCCCGCGTAGCTTCGCATTCAAACGTGTTTCAAACGGCAGTGAGTGGTTCCCGGTGT 105
*** * ******************************************************
consensus_5269#0 GAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGTCGTTCTCAAGCGT 180
consensus_5269#1 GAATTAAGGCGTGTGTAGTGCGTGTGGCATACATTTAGGCGTCATGCCGTTCTCAAGCGT 165
********************************************** *************
consensus_5269#0 TGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCC 240
consensus_5269#1 TGCCGTGTTGGCGTTGCTGTGTGGCGTTGGGCTTTGCGCGGCCTATCCCTATCCCTATCC 225
************************************************************
consensus_5269#0 GCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCA 300
consensus_5269#1 GCAGAATGCGTTCATGTACTACCGCAATGCACTTCCGGTGATGGCGTACCCTCAGCTGCA 285
************************************************************
consensus_5269#0 GCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCA 360
consensus_5269#1 GCAAACCGCCATGTATCAGCACGCAATGTACCAGAACCAGCGGCTACGGCAGAACTATCA 345
************************************************************
consensus_5269#0 ACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGG 420
consensus_5269#1 ACGTCGTTCGGCAACGAGCGGCGTGGCCGCATTTGCCGCCGGAGACAACATCGCCACCGG 405
************************************************************
consensus_5269#0 TACGATTCTCAAGG------------------ATCCTGCTGTGGAGGGTTACCCTTCGGT 462
consensus_5269#1 TACGATTCTCAAGGCTGACTGCCGACCCGCAGATCCTGCTGTGGAGGGTTACCCTTCGGT 465
************** ****************************
consensus_5269#0 GCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAG 522
consensus_5269#1 GCAGTCGTTTGCCGATGCGTACCCAGCGGACGCGCTGCCCGAGAATGAGATCCCGCTCAG 525
************************************************************
consensus_5269#0 CGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCT 582
consensus_5269#1 CGACGATGGTGGACAGTTGGAGCAGGATGGAAATGCTGGGGGCGAGCTAGACTTTGCGCT 585
************************************************************
consensus_5269#0 AGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGCGCCGCTAGTGCCGAC 642
consensus_5269#1 AGACAACGAGGAGCCGCTGGAGGATGTGCCGGCTGTTGCTGCTGGGCCGCTAGTGCCGAC 645
******************************************** ***************
consensus_5269#0 AACAACCGACAAGCGCAAGAAG-AANGTTACCGTGCAGCTCGATTCGG-CCTCGGCTGAA 700
consensus_5269#1 GACAACCGACAAGCGCAAGAAGGAAGGTTACCGTGCAGCTCGATTCGGGCCTCGGCTGAA 705
********************* ** ********************** ***********
consensus_5269#0 GACGA-TCAGGAGGATG--AAGAGCAGGTGAG--CTTCGGTACG-CGTCGT--GGCGGNT 752
consensus_5269#1 GACGNATCAGGAGGATGCAAGAAACAGGTGAGGCTTTCGGTACGGCGTCAGTGGGCGGTT 765
**** *********** * * ******** ********* **** ***** *
consensus_5269#0 C-GGNCGGTCGTCCCGCCGGAAGATCCGCTGGACCCA-TGTTCCCCGTTACGTTTGGCAG 810
consensus_5269#1 CCGGCCGGTCGTCCGCCGGAAGGGTCCGNTGGACCCNATGTTCCCCGGT----------- 814
* ** ********* * * * * **** ******* ********* *
consensus_5269#0 CACCAATGGCGGTGCGATCGCTATTGCTAACAGCTACAGTACNGGAAAGGGTGGATCGGC 870
consensus_5269#1 ------------------------------------------------------------
consensus_5269#0 TACCAGCCATGCCACCGCTTA 891
consensus_5269#1 ---------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||