cluster # 5453

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Anopheles gambiae
cluster # 5453 cluster # 5453 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5453#0 length = 1196 sequences # 3

consensus_5453#1 length = 638 sequences # 1

consensusID : consensus_5453#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1196
fasta sequence

                              [ATCGGGGGCTAACGACACACTTCAAGGGCGATCAGTTCCCGGCCGGCATAATTGAAGGTCCACCAGGACCGCCAGGACCTCCTGGTCCACCGGGAGAAAAGGGTGACCCAGGACCAGAAGGACCGCCAGGACCGCAAGGCGAGAAAGTACCGCGAGGCAAGCGTGGCAAACGGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACTGCCCGGAACGGATGGCATCCCGGGCCAGGAGGGACCACGAGGTGAGAAGGGCGGCAAGGGTGATCCGGGCCCGATCGGCAAGCGGGGACGGAAGGGCGATCGTGGTGACAAGGGTGACCAGGGCGTGCCCGGACTGGACGCACCGTGCCCGCTGGGGATGGATGGACTACCCCTGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCACCACCCCACAAGGACTATCTGCCCGATGTGACCGGAACCGAGAACGAAAGTGAATACGTCGAGGAGGAGGACGACGGGGCGCCCGAAACCGAGGACTACGAAGAGGAGTACGTGGAGAACGAAAATGGAAACTGATTCCAACCCCCGTTGACGGTTTAGGGCGGTACAGGGCAGACGTTTGGTCGTAGACTTGGGTGGAAACGGGAAATGTTAAATTTTACCAACAAACAATTAACATTCCACTGGCTGGTGTCCTTTTTTTGTTGCGCGATTGCGGTCATCTTGCTGTGTGTAGTTTTTACATGACCATCCCTTCTTTTCCATATTACCGCATTTGTGAATGGGAACGAGTTTGCCCTTTTGGTTTTTGTCCGCTCACGTTGTTGCTGATGTGTTTCCACTTTAATGCTATTATTTGCGTTGCGTTGATTAATTTATTTCGATTGCTGGCGTGAGCCCATTTTTTCATCTTGCTTTTACCATTTCCGATGGGCCAATGTATGTAAATGAAACTGCCAAAACGGAAAAGGGGAAATGGAAGCCTCCCGTACCTTCGTCAACGCGCGTGCCGCCATTCGTGGAAATGCGCACGGGCGAAATGATAGATGTAAATTAATTTAAGCTACACAATCCGTATCAGATTTTTATTTTCGCAGCATAATTTATGGGAACACACACGGGAACACACCACACACACATTCAGTTTTACATTTATGA]

[+] EMBL BX615217             [ATCGGGGGCTAACGACACACTTCAAGGGCGATCAGTTCCCGGCCGGCATAATTGAAGGTCCACCAGGACCGCCAGGACCTCCTGGTCCACCGGGAGAAAAGGGTGACCCAGGACCAGAAGGACCGCCAGGACCGCAAGGCGAGAAAGTACCGCGAGGCAAGCGTGGCAAACGGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACTGCCCGGAACGGATGGCATCCCGGGCCAGGAGGGACCACGAGGTGAGAAGGGCGGCAAGGGTGATCCGGGCCCGATCGGCAAGCGGGGACGGAAGGGCGATCGTGGTGACAAGGGTGACCAGGGCGTGCCCGGACTGGACGCACCGTGCCCGCTGGGGATGGATGGACTACCCCTGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM626329             [                                               ccgATTGAAGGTCCACCAGGACCGCCAGGACCTCCTGGTCCACCGGGAGAAAAGGGTGACCCAGGACCAGAAGGACCGCCAGGACCGCAAGGCGAGAAAGGACCGCGAGGCAAGCGTGGCAAACGGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACTGCCCGGAACGGATGGCATCCCGGGCCAGGAGGGACCACGAGGTGAGAAGGGCGGCAAGGGTGATCCGGGCCCGATCGGCAAGCGGGGACGGAAGGGCGATCGTGGTGACAAGGGTGACCAGGGCGTGCCCGGACTGGACGCACCGTGCCCGCTGGGGATGGATGGACTACCCCTGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCACCACCCCACAAGGACTATCTGCCCGATGTGACCGGAACCGAGAACGAAAGTGAATACGTCGAGGAGGAGGACGACGGGGCGCCCGAAACCGAGGACTACGAAGAGGAGTACGTGGAGAACGAAAATGGAAACTGATTCCAACCCCCGTTGACGGTTTAGGGCGGTACAGGGCAGACGTTTGGTCGTAGACTTGGGTGGAAACGGGAAATGTTAAATTTTACCAACAAACAATTAACATTCCACTGGCTGGTGTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX610251             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCACCACCCCACAAGGACTATCTGCCCGATGTGACCGGAACCGAGAACGAAAGTGAATACGTCGAGGAGGAGGACGACGGGGCGCCCGAAACCGAGGACTACGAAGAGGAGTACGTGGAGAACGAAAATGGAAACTGATTCCAACCCCCGTTGACGGTTTAGGGCGGTACAGGG AGACGTTTGGTCGTAGACTTGGGTGG AACGGGAAATGTTAAATTTTACCAACAAACAATTAACATTCCACTGGCTGGTGTCCTTTTTTTGTTGCGCGATTGCGGTCATCTTGCTGTGTGTAGTTTTTACATGACCATCCCTTCTTTTCCATATTACCGCATTTGTGAATGGGAACGAGTTTGCCCTTTTGGTTTTTGTCCGCTCACGTTGTTGCTGATGTGTTTCCACTTTAATGCTATTATTTGCGTTGCGTTGATTAATTTATTTCGATTGCTGGCGTGAGCCCATTTTTTCATCTTGCTTTTACCATTTCCGATGGGCCAATGTATGTAAATGAAACTGCCAAAACGGAAAAGGGGAAATGGAAGCCTCCCGTACCTTCGTCAACGCGCGTGCCGCCATTCGTGGAAATGCGCACGGGCGAAATGATAGATGTAAATTAATTTAAGCTACACAATCCGTATCAGATTTTTATTTTCGCAGCATAATTTATGGGAACACACACGGGAACACACCACACACACATTCAGTTTTACATTTATGA]




>consensus_5453#0
ATCGGGGGCTAACGACACACTTCAAGGGCGATCAGTTCCCGGCCGGCATAATTGAAGGTC
CACCAGGACCGCCAGGACCTCCTGGTCCACCGGGAGAAAAGGGTGACCCAGGACCAGAAG
GACCGCCAGGACCGCAAGGCGAGAAAGTACCGCGAGGCAAGCGTGGCAAACGGGGACCGC
CGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCG
ATCCAGGACTGCCCGGAACGGATGGCATCCCGGGCCAGGAGGGACCACGAGGTGAGAAGG
GCGGCAAGGGTGATCCGGGCCCGATCGGCAAGCGGGGACGGAAGGGCGATCGTGGTGACA
AGGGTGACCAGGGCGTGCCCGGACTGGACGCACCGTGCCCGCTGGGGATGGATGGACTAC
CCCTGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCAC
CACCCCACAAGGACTATCTGCCCGATGTGACCGGAACCGAGAACGAAAGTGAATACGTCG
AGGAGGAGGACGACGGGGCGCCCGAAACCGAGGACTACGAAGAGGAGTACGTGGAGAACG
AAAATGGAAACTGATTCCAACCCCCGTTGACGGTTTAGGGCGGTACAGGGCAGACGTTTG
GTCGTAGACTTGGGTGGAAACGGGAAATGTTAAATTTTACCAACAAACAATTAACATTCC
ACTGGCTGGTGTCCTTTTTTTGTTGCGCGATTGCGGTCATCTTGCTGTGTGTAGTTTTTA
CATGACCATCCCTTCTTTTCCATATTACCGCATTTGTGAATGGGAACGAGTTTGCCCTTT
TGGTTTTTGTCCGCTCACGTTGTTGCTGATGTGTTTCCACTTTAATGCTATTATTTGCGT
TGCGTTGATTAATTTATTTCGATTGCTGGCGTGAGCCCATTTTTTCATCTTGCTTTTACC
ATTTCCGATGGGCCAATGTATGTAAATGAAACTGCCAAAACGGAAAAGGGGAAATGGAAG
CCTCCCGTACCTTCGTCAACGCGCGTGCCGCCATTCGTGGAAATGCGCACGGGCGAAATG
ATAGATGTAAATTAATTTAAGCTACACAATCCGTATCAGATTTTTATTTTCGCAGCATAA
TTTATGGGAACACACACGGGAACACACCACACACACATTCAGTTTTACATTTATGA

consensusID : consensus_5453#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [CCGGTAGGTCCACCGGGACCGCCCGGACCACCTGGACGCGATGGAACACCCGGCACCAAGGGTGAAGCAGGTGAAGTGGGAGCTCCGGGATCGCTTGGACCGCGCGGTCTGGACGGAATGCCGGGAGAGCCGGGTATTGAGGGTCCTCCCGGATTGCCGGGCTATCAGGGCCCGCCGGGCGAGAAGGGCGATCCAGGCGATATCGGACCTCCAGGACTTATGGGGCCGCCTGGTTTGCCGGGTCCACCGGGCTACCCAGGAGTAAAAGGCGACAAAGGAGATCGAGGAGATTCCTTCCGGAAAATGCGACGGCGACAAGATCACGAAGGCATGGCCGACGAACCGTATCGGGATGTTGTGTATGGACCGCCGGGACCACCGGGACCACCGGGTCCGCTCGGACATCCGGGACCACCGGGACCGCGAGGCTACGATGGCAAGAAGGGCGACCGAGGCGAAAAAGGACAGAAGGGCGAATATGGACCAATGGGATTACCGGGTCCAATGGGAATGCGTGGAGATTCCGGTCCAGTGGGCCCTGTGGGCAAACCAGGACATCCGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACT]

[+] EMBL BM575361             [CCGGTAGGTCCACCGGGACCGCCCGGACCACCTGGACGCGATGGAACACCCGGCACCAAGGGTGAAGCAGGTGAAGTGGGAGCTCCGGGATCGCTTGGACCGCGCGGTCTGGACGGAATGCCGGGAGAGCCGGGTATTGAGGGTCCTCCCGGATTGCCGGGCTATCAGGGCCCGCCGGGCGAGAAGGGCGATCCAGGCGATATCGGACCTCCAGGACTTATGGGGCCGCCTGGTTTGCCGGGTCCACCGGGCTACCCAGGAGTAAAAGGCGACAAAGGAGATCGAGGAGATTCCTTCCGGAAAATGCGACGGCGACAAGATCACGAAGGCATGGCCGACGAACCGTATCGGGATGTTGTGTATGGACCGCCGGGACCACCGGGACCACCGGGTCCGCTCGGACATCCGGGACCACCGGGACCGCGAGGCTACGATGGCAAGAAGGGCGACCGAGGCGAAAAAGGACAGAAGGGCGAATATGGACCAATGGGATTACCGGGTCCAATGGGAATGCGTGGAGATTCCGGTCCAGTGGGCCCTGTGGGCAAACCAGGACATCCGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACT]




>consensus_5453#1
CCGGTAGGTCCACCGGGACCGCCCGGACCACCTGGACGCGATGGAACACCCGGCACCAAG
GGTGAAGCAGGTGAAGTGGGAGCTCCGGGATCGCTTGGACCGCGCGGTCTGGACGGAATG
CCGGGAGAGCCGGGTATTGAGGGTCCTCCCGGATTGCCGGGCTATCAGGGCCCGCCGGGC
GAGAAGGGCGATCCAGGCGATATCGGACCTCCAGGACTTATGGGGCCGCCTGGTTTGCCG
GGTCCACCGGGCTACCCAGGAGTAAAAGGCGACAAAGGAGATCGAGGAGATTCCTTCCGG
AAAATGCGACGGCGACAAGATCACGAAGGCATGGCCGACGAACCGTATCGGGATGTTGTG
TATGGACCGCCGGGACCACCGGGACCACCGGGTCCGCTCGGACATCCGGGACCACCGGGA
CCGCGAGGCTACGATGGCAAGAAGGGCGACCGAGGCGAAAAAGGACAGAAGGGCGAATAT
GGACCAATGGGATTACCGGGTCCAATGGGAATGCGTGGAGATTCCGGTCCAGTGGGCCCT
GTGGGCAAACCAGGACATCCGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGC
GAAACCGGCAACAAGGGCGAACGGGGCGATCCAGGACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5453#0      ATCGGGGGCTAACGACACACTTCAAGGGCGATCAGTTCCCGGCCGGCATAATTGAAGGTC 60
consensus_5453#1      ---------------------------CCGGTAGGTCC---ACCGGGACCGCC--CGGAC 28
                                                  ** *  ** *    **** *        ** *

consensus_5453#0      CACCAGGACCGCCAGGACCTCCTGGTCCACCGGGAGAAAAGGGTGACCCAGGACCAGAAG 120
consensus_5453#1      CACCTGGACGCGATGGAACACCCGGCACCAAGGGTGAAGCAGGTGAAGTGGGAGCTCCGG 88
                      **** ****     *** * ** **  *   *** ***   *****    *** *    *

consensus_5453#0      GACCGCCAGGACCGCAAGGCGAGAAAGTACCGCGAGGCAAGCGTGGCAAACGGGGACCGC 180
consensus_5453#1      GATCGCTTGGACCGCGCGGTCTGGACGGAATGCCGGGAGAGCCGGGTATTGAGGGTCCTC 148
                      ** ***  *******  **   * * * *  **  **  ***  ** *    *** ** *

consensus_5453#0      CGGGACTGGACGGGATGAAGGGCGCACAGGGCGAAACCGGCAACAAGGGCGAACGGGGCG 240
consensus_5453#1      CCGGATTGCCGGGCTATCAGGGCCCGCCGGGCGAGAAGGGCGATCCAGGCGATATCGGAC 208
                      * *** **   **     ***** * * ****** *  *** *    *****    **  

consensus_5453#0      ATCCAGGACTGCCCGGAACGGATGGCATCCCGGGCCAGGAGGGACCACGAGGTGAGAAGG 300
consensus_5453#1      CTCCAGGACTTATGGGGCCGCCTGGTTTGCCGGGTCCACCGGGCTACCCAGGAGTAAAAG 268
                       *********    **  **  ***  * ***** *    ***    * *** *  ** *

consensus_5453#0      GCGGCAAGGGTGATCCGGGCCCGATCGGCAAGCGGGGACGGAAGGGCGATCGTGGTGACA 360
consensus_5453#1      GCGACAAAGGAGATCGAGG--AGATTC-CTTCCGGA-----AAATGCGAC---GGCGACA 317
                      *** *** ** ****  **   ***   *   ***      **  ****    ** ****

consensus_5453#0      AGGGTGACCAGGGCGTGCCCGGACTGGACGCACCGTGCCCGCTGGGGATGGATGGACTAC 420
consensus_5453#1      AGA-TCACGAAGGCATGGCCG------ACGAACCGTATCGGGATGTTGTGTATGGACCGC 370
                      **  * ** * *** ** ***      *** *****  * *   *   ** ******  *

consensus_5453#0      CCCTGCCCGGATGTGGTTGGCGTGCGCCGAAAGTGTATCAGGAACCGATCGTGCCGTCAC 480
consensus_5453#1      CGGGACC--ACCGGGACCACCGGGT-CCGCTCGGACATCCGGGACCACCGGGACCG---C 424
                      *    **     * *     ** *  ***   *   *** ** ***    *  ***   *

consensus_5453#0      CACCCCACAAGGACTATCTGCCCGATGTGACCGGAACCGAGAACGAAAGTGAATACGTCG 540
consensus_5453#1      GAGGCTACGATGGCAAGAAGGGCGACCGAGGCGAAA--AAGGACAGAAGGGCGAATATGG 482
                       *  * ** * * * *   *  ***      ** **   ** **  *** *   *  * *

consensus_5453#0      AGGAGGAGGACGACGGGGCGC--CCGAAAC---CGAGGACTACGAAGAGGAGTACGTGGA 595
consensus_5453#1      ACCAATGGGATTACCGGGTCCAATGGGAATGCGTGGAGATTCCGGTCCAGTGGGCCCTGT 542
                      *  *   ***  ** ***  *    * **     *  ** * **     * *  *   * 

consensus_5453#0      GAACGAAAATGGAAA-CTGATTCCAACCCCCGTTGACGGTTTAGGGCG-GTACAGGGCAG 653
consensus_5453#1      GGGCAAACCAGGACATCCGGGACCGCCGGGACTGGACGGGATGAAGGGCGCACAGGGCGA 602
                      *  * **   *** * * *   **  *     * *****  *   * * * *******  

consensus_5453#0      ACGTTTGGTCGTAGACTTGGGTGGAAACGGGAAATGTTAAATTTTACCAACAAACAATTA 713
consensus_5453#1      A------ACCGGCAACAAGGGCG-AACGGGGCGATCCAGGACT----------------- 638
                      *        **   **  *** * **  ***  **     * *                 

consensus_5453#0      ACATTCCACTGGCTGGTGTCCTTTTTTTGTTGCGCGATTGCGGTCATCTTGCTGTGTGTA 773
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      GTTTTTACATGACCATCCCTTCTTTTCCATATTACCGCATTTGTGAATGGGAACGAGTTT 833
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      GCCCTTTTGGTTTTTGTCCGCTCACGTTGTTGCTGATGTGTTTCCACTTTAATGCTATTA 893
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      TTTGCGTTGCGTTGATTAATTTATTTCGATTGCTGGCGTGAGCCCATTTTTTCATCTTGC 953
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      TTTTACCATTTCCGATGGGCCAATGTATGTAAATGAAACTGCCAAAACGGAAAAGGGGAA 1013
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      ATGGAAGCCTCCCGTACCTTCGTCAACGCGCGTGCCGCCATTCGTGGAAATGCGCACGGG 1073
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      CGAAATGATAGATGTAAATTAATTTAAGCTACACAATCCGTATCAGATTTTTATTTTCGC 1133
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      AGCATAATTTATGGGAACACACACGGGAACACACCACACACACATTCAGTTTTACATTTA 1193
consensus_5453#1      ------------------------------------------------------------
                                                                                  

consensus_5453#0      TGA 1196
consensus_5453#1      ---