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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5750#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1130 fasta sequence
[CCGCGGACGCGTGGGCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTGCTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCTGTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTTCCTGCGCAACAAGGAGGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGAGCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGACAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAGCAGGGCTCGCCCGAGCAGAACGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCAGCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGTGTCGACCGTGCTGGGCGAAGACTTTATGCCGCAGGCCGAGAAGGAGCTCGACTTTGCGGCCTGCGTCGAGAAGGAGCTGACCAGCAACACGCCGGCCCTGCTCTGCTCGGTCACCGGGTACGATGCGTCGTCGCGCGTCGACGATCTCGCGGCGGAGCTGAACAAGCAGATCTCGAGCATTGCGATCGGTTCGGCGGAAGGCTTCAACCAGGCGGAACGGGCCATCAACATGGCGTGCAAGTCGGGCCGCTGGGTGCTGCTGAAGAACGTGCACCTGGCCCCCCAGTGGCTGGTGCAGCTGGAGAAGAAGCTTCACTCGCTGCAGCCCCACTCCGGCTTCCGGCTGTACCTCACGATGGAGATCAACCCGAAGGTGCCGGTGAATCTGCTGCGTGCCGGTCGCATCTTCGTGTACGAACCACCGCCAGGCATTCGGGCTAATCTGCTGCGCACGTTCTCGACCGTGCCGGCCGCCCGGATGATGAAGCAGCCGAGCGAGCGCGCCCGGCTGTACTTCCTGCTGTCCTGGTTCCACGCGATCGTGCAGGAGCGGCTCCGGTACGTGCCGCTCGGATGGGCGAAGAATACGAGTTCAACGAGTCGGATCTGCGCGTCGCCTGCGACACGCTCGACACGTGGATCG]
[+] EMBL BM602908 [CCGCGGACGCGTGGGCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTGCTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCTGTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTTCCTGCGCAACAAGGAGGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGAGCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGACAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAGCAGGGCTCGCCCGAGCAGAACGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCAGCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGTGTCGACCGTGCTGGGCGAAGACTTTATGCCGCAGGCCGAGAAGGAGCTCGACTTTGCGGCCTGCGTCGAGAAGGAGCTGACCAGCAACACGCCGGCCCTGCTCTGCTCGGTCACCGGGTACGATGCGTCGTCGCGCGTCGACGATCTCGCGGCGGAGCTGAACAAGCAGATCTCGAGCATTGCGATC ]
[+] EMBL BX606847 [ TCGACGATCTCGCGGCGGAGCTGAACAAGCAGATCTCGAGCATTGCGATCGGTTCGGCGGAAGGCTTCAACCAGGCGGAACGGGCCATCAACATGGCGTGCAAGTCGGGCCGCTGGGTGCTGCTGAAGAACGTGCACCTGGCCCCCCAGTGGCTGGTGCAGCTGGAGAAGAAGCTTCACTCGCTGCAGCCCCACTCCGGCTTCCGGCTGTACCTCACGATGGAGATCAACCCGAAGGTGCCGGTGAATCTGCTGCGTGCCGGTCGCATCTTCGTGTACGAACCACCGCCAGGCATTCGGGCTAATCTGCTGCGCACGTTCTCGACCGTGCCGGCCGCCCGGATGATGAAGCAGCCGAGCGAGCGCGCCCGGCTGTACTTCCTGCTGTCCTGGTTCCACGCGATCGTGCAGGAGCGGCTCCGGTACGTGCCGCTCGGATGGGCGAAGAATACGAGTTCAACGAGTCGGATCTGCGCGTCGCCTGCGACACGCTCGACACGTGGATCG]
consensusID : consensus_5750#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 746 fasta sequence
[CCGCACGCTGGAAACGCTCAAGAAGGAGGCGGCCGACATCGGGCAGAAGGTGGAGGAGACGGATAAGGTGATCGGCGAGATCGAGACGGTGTCGCAGCAGTACCTGTCCCTGTCGCAGGCCTGCTCGAACATCTACTTCACGATGGACAGCCTGAACCAGGTGCACTTCCTCTACCAGTACTCGCTGAAGATGTTCCTCGACATCTTCAGCACGGTGCTGCACAACAACCCGAAGCTCGAGGGCAAATCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTGCTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCTGTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTTCCTGCGCAACAAGGAAGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGAGCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGACAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAACAGGGCTCGCCCGAGCAGAACGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCAGCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGTGTCGACCGTGCTGGGCGAAGACTTTA]
[+] EMBL BM642949 [CCGCACGCTGGAAACGCTCAAGAAGGAGGCGGCCGACATCGGGCAGAAGGTGGAGGAGACGGATAAGGTGATCGGCGAGATCGAGACGGTGTCGCAGCAGTACCTGTCCCTGTCGCAGGCCTGCTCGAACATCTACTTCACGATGGACAGCCTGAACCAGGTGCACTTCCTCTACCAGTACTCGCTGAAGATGTTCCTCGACATCTTCAGCACGGTGCTGCACAACAACCCGAAGCTCGAGGGCAAATCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTGCTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCTGTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTTCCTGCGCAACAAGGAAGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGAGCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGACAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAACAGGGCTCGCCCGAGCAGAACGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCG ]
[+] EMBL BM639484 [ ccgCGAACATCTACTTCACGATGGACAGCCTGAACCAGGTGCACTTCCTCTACCAGTACTCGCTGAAGATGTTCCTCGACATCTTCAGCACGGTGCTGCACAACAACCCGAAGCTCGAGGGCAAATCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTGCTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCTGTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCACGAGTTCAACTTCTTCCTGCGCAACAAGGAGGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGAGCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTCTGCCCATCTTCCGCAAGCTGCTCGACAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAGCAGGGCTCGCCCGAGCAGAACGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCAGCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGTGTCGACCGTGCTGGGCGAAGACTTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5750#0 ------------------------------------------------------------
consensus_5750#1 CCGCACGCTGGAAACGCTCAAGAAGGAGGCGGCCGACATCGGGCAGAAGGTGGAGGAGAC 60
consensus_5750#0 ------------------------------------------------------------
consensus_5750#1 GGATAAGGTGATCGGCGAGATCGAGACGGTGTCGCAGCAGTACCTGTCCCTGTCGCAGGC 120
consensus_5750#0 ------------------------------------------------------------
consensus_5750#1 CTGCTCGAACATCTACTTCACGATGGACAGCCTGAACCAGGTGCACTTCCTCTACCAGTA 180
consensus_5750#0 ------------------------------------------------CCGCGGACGCGT 12
consensus_5750#1 CTCGCTGAAGATGTTCCTCGACATCTTCAGCACGGTGCTGCACAACAACCCGAAGCTCGA 240
** * **
consensus_5750#0 GGGC-----GGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTG 67
consensus_5750#1 GGGCAAATCGGACCACACGGCCCGGCTGCTCATCATCACGTCGGACCTGTACCGCGTGTG 300
**** ***************************************************
consensus_5750#0 CTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCT 127
consensus_5750#1 CTACGATCGGGTGGCGCGCGGCATGCTGCACGCGGACCGGCTCACGTTCGCCATCCTGCT 360
************************************************************
consensus_5750#0 GTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTT 187
consensus_5750#1 GTGCCGCATCCATCTGAAGGGCACGGCGGAACCGAACCTCGACCAGGAGTTCAACTTCTT 420
************************************************************
consensus_5750#0 CCTGCGCAACAAGGAGGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGA 247
consensus_5750#1 CCTGCGCAACAAGGAAGGCTTGGTGGCGTCGGCCAGCCACGTCGATGGCGTCAGTGCCGA 480
*************** ********************************************
consensus_5750#0 GCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGA 307
consensus_5750#1 GCAGCTCGAGTCCGTCACCCGGCTGGCGACGCGTTTGCCCATCTTCCGCAAGCTGCTCGA 540
************************************************************
consensus_5750#0 CAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAGCAGGGCTCGCCCGAGCAGAA 367
consensus_5750#1 CAAGATCAAATCCATGCCGGAGCTGACCGCCTGGCTGCAACAGGGCTCGCCCGAGCAGAA 600
*************************************** ********************
consensus_5750#0 CGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCA 427
consensus_5750#1 CGTTCCCGTGCTGTGGGATGAATCGAAGGCGCTGTCGGCGATTTCGGCCGCCATGCATCA 660
************************************************************
consensus_5750#0 GCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGT 487
consensus_5750#1 GCTGCTGCTGATACAGGCGTTCCGGCCGGATCGTGTCATTGCCGCGGCGCACCTGTTCGT 720
************************************************************
consensus_5750#0 GTCGACCGTGCTGGGCGAAGACTTTATGCCGCAGGCCGAGAAGGAGCTCGACTTTGCGGC 547
consensus_5750#1 GTCGACCGTGCTGGGCGAAGACTTTA---------------------------------- 746
**************************
consensus_5750#0 CTGCGTCGAGAAGGAGCTGACCAGCAACACGCCGGCCCTGCTCTGCTCGGTCACCGGGTA 607
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 CGATGCGTCGTCGCGCGTCGACGATCTCGCGGCGGAGCTGAACAAGCAGATCTCGAGCAT 667
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 TGCGATCGGTTCGGCGGAAGGCTTCAACCAGGCGGAACGGGCCATCAACATGGCGTGCAA 727
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 GTCGGGCCGCTGGGTGCTGCTGAAGAACGTGCACCTGGCCCCCCAGTGGCTGGTGCAGCT 787
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 GGAGAAGAAGCTTCACTCGCTGCAGCCCCACTCCGGCTTCCGGCTGTACCTCACGATGGA 847
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 GATCAACCCGAAGGTGCCGGTGAATCTGCTGCGTGCCGGTCGCATCTTCGTGTACGAACC 907
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 ACCGCCAGGCATTCGGGCTAATCTGCTGCGCACGTTCTCGACCGTGCCGGCCGCCCGGAT 967
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 GATGAAGCAGCCGAGCGAGCGCGCCCGGCTGTACTTCCTGCTGTCCTGGTTCCACGCGAT 1027
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 CGTGCAGGAGCGGCTCCGGTACGTGCCGCTCGGATGGGCGAAGAATACGAGTTCAACGAG 1087
consensus_5750#1 ------------------------------------------------------------
consensus_5750#0 TCGGATCTGCGCGTCGCCTGCGACACGCTCGACACGTGGATCG 1130
consensus_5750#1 -------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||