Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5787 cluster # 5787       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5787#0 length = 1091 sequences # 4  
consensusID : consensus_5787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1091
fasta sequence 
                              [CCGGTTGGATGATATCGTTCTGCCGCCCCCAATCAGCTTCGACGTGCCGGAAGACGATACGAAGCTGCCGGAGGCGAAGGCCTCGTTCCTATGCGACACGTCCGGTGCCGATCTGGTGCGGCAATTTTTGGAACAATACTTTACCATCTACGATTCCGATAATAGGCAACCGCTGCTGGAAGCCTATCACGAGCACGCCATGTTTTCGCTGACGGTTAACACAACCTACCAAAGCAATCAGCAAAAG-TTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGACTCCCGCTGTCGGTTTCTGAAGCAGGGACGTCTGCAGGTCGTATCGCATCTGTCCTCACTGCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCACATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGAGCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCATACGCAACGAAATGATGCACGTGAACACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAAGGGGGCAGAAAACGGCATGCCGCAGCAGCAAG-CGGCACCATCGGCCGCCCCCACCGTACCGGCCGTGGTCGGTGTGGCCGCGACTGTTCCGCTGGTGCCGGACGAAAACACCAAGCTGCAGATGATACAGGCGCTGTCGGTGCAGACCAACATGAACGCCGAATGGAGCAAACGCTGCCTGGAGGAAACGAACTGGGACTATCCGCGTGCCGAGTTTGCGTTCGCCGAGCTACACAAACAGAACCGGATACCGCCGGAAGCGTTCAGAACGAATTAAACCA-TTTTTGTAGGCGGAATGTAGCGGAAAGTAATTCATCAATCATAAGTTAGTTTGTTTTAAGGGTTAGCAGACGTTAGCGGACAAATTTGGTCGGTTATTACAATAGGTTTTAGGCTTTCTCGTACAGATCATGCGTTGTACTTTTCCCGTTGATTTTTTTTTCTTCCTCACACACACACACACACACACGAACCCAAAGTAGTGCGCCCGG]

[+] EMBL BM606581             [CCGGTTGGATGATATCGTTCTGCCGCCCCCAATCAGCTTCGACGTGCCGGAAGACGATACGAAGCTGCCGGAGGCGAAGGCCTCGTTCCTATGCGACACGTCCGGTGCCGATCTGGTGCGGCAATTTTTGGAACAATACTTTACCATCTACGATTCCGATAATAGGCAACCGCTGCTGGAAGCCTATCACGAGCACGCCATGTTTTCGCTGACGGTTAACACAACCTACCAAAGCAATCAGCAAAAG TTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGACTCCCGCTGTCGGTTTCTGAAGCAGGGACGTCTGCAGGTCGTATCGCATCTGTCCTCACTGCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCACATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGAGCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCATACGCAACGAAATGATGCACGTGAACACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAAGGGGGCAGAAAACGGCATGCCGCAGCAGCAAG CGGCACCATCGGCCGCCCCCACCGTACCGGCCGTGGTCGGTGTGGCCGCGACTGTTCCGC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX620162             [                                         ACGTGCCGGAAGACGATACGAAGCTGCCGGAGGCGAAGGCCTCGTTCCTATGCGACACGTCCGGTGCCGATCTGGTGCGGCAATTTTTGGAACAATACTTTACCATCTACGATTCCGATAATAGGCAACCGCTGCTGGAAGCCTATCACGAGCACGCCATGTTTTCGCTGACGGTTAACACAACCTACCAAAGCAATCAGCAAAAG TTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGACTCCCGCTGTCGGTTTCTGAAGCAGGGACGTCTGCAGGTCGTATCGCATCTGTCCTCACTGCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCACATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGAGCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCATACGCAACGAAATGATGCACGTGAATACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAAGGGGGCAGAAAACGGCATGCCGCAGCAGCAAGCCGGCACCATCGGCCGCCCCCACCGTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS08VM5             [                                                                                                                                                                                                               GCTGACGGTTAACACAACCTACCAAAGCAATCAGCAAAAGATTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGACTCTCGCTGTCGGTTTCTGAAGCAGGGACGACTGCAGGTCGTATCGCATCTGTCCTCACTGCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCACATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGAGCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCATACGCAACGAAATGATGCACGTGAACACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAAGGGGGCAGAAAACGGCATGCCGCAGCAGCAAG CGGCACCATCGGCCGCCCCCACCGTACCGGCCGTGGTCGGCGTGGCCGCGACTGTTCCGCTGGTGCCGGACGAAAACACCAAGCTGCAGATGATACAGGCGCTGTCGGTGCAGACCAACATGAACGCCGAATGGAGCAAACGCTGCCTGGAGGAAACGAACTGGGACTATCCGCGTGCCGAGTTTGCGTTCGCCGAGCTACACAAACAGAACCGGATACCGCCGGAAGCGTTCAGAACGAATTAAACCA TTTTTGTAGGCGGAATGTAGCGGAAAGTAATTCATCAATCATAAGTTAGTTTGTTTTAAGGGTTAGCAGACGTTAGCGGACAAATTTGGTCGGTTATTACAATAGGTTTTAGGCTTTCTCGTACAGATCATGCGTTGTACTTTTCCCGTTGATTTTTTTTTCTTCCTCACACACACACACACACACACGAACCCAAAGTAGTGCGCCCGG]
[+] EMBL BM624641             [                                                                                                                                                                                                                                             ccgGCAAAAG TTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGACTCCCGCTGTCGGTTTCTGAAGCAGGGACGTCTGCAGGTCGTATCGCATCTGTCCTCACTGCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCACATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGAGCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCATACGCAACGAAATGATGCACGTGAACACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAAGGGGGCAGAAAACGGCATGCCGCAGCAGCAAG CGGCACCATCGGCCGCCCCCACCGTACCGGCCGTGGTCGGTGTGGCCGCGACTGTTCCGCTGGTGCCGGACGACAACACCAAGCTGCAGATGATACAGGCGCTGTCGGCGCAGACCAACATGAACGCCGAATGGAGCAAACGCTGCCTGGAGGAAACGAACTGGGACTATCCGCGTGCCGAGTTTGCGTTCGCCGAGCTACACAAACAGAACCGGATACCGCCGGAAGCGTTCAGAACGAATTAAACCATTTTTTGTACGCGGAATGTAGtg                                                                                                                                                                                            ]




>consensus_5787#0
CCGGTTGGATGATATCGTTCTGCCGCCCCCAATCAGCTTCGACGTGCCGGAAGACGATAC
GAAGCTGCCGGAGGCGAAGGCCTCGTTCCTATGCGACACGTCCGGTGCCGATCTGGTGCG
GCAATTTTTGGAACAATACTTTACCATCTACGATTCCGATAATAGGCAACCGCTGCTGGA
AGCCTATCACGAGCACGCCATGTTTTCGCTGACGGTTAACACAACCTACCAAAGCAATCA
GCAAAAGTTGGGTGCGTACATATCCGGAAGTCGCAACATTAAGCACAAGACAGACCTGGA
CTCCCGCTGTCGGTTTCTGAAGCAGGGACGTCTGCAGGTCGTATCGCATCTGTCCTCACT
GCCACCAACCAAGCACGATCTGACATCGTTTGCCGTAGATCTAACCCTGTTCACGCCGCA
CATGCTGCAACTAACCGTCACGGGCGTGTTTAAGGAGCGCAAGGGCAGCGGCAATATGGA
GCAGATACGATCGTTTCAGCGTACGCTCGTGATCGTACCGTCGAACGGTGGTTTCTGCAT
ACGCAACGAAATGATGCACGTGAACACGGTGACGCGGGCACAGGAAAACAAAGCGTTCAA
GGGGGCAGAAAACGGCATGCCGCAGCAGCAAGCGGCACCATCGGCCGCCCCCACCGTACC
GGCCGTGGTCGGTGTGGCCGCGACTGTTCCGCTGGTGCCGGACGAAAACACCAAGCTGCA
GATGATACAGGCGCTGTCGGTGCAGACCAACATGAACGCCGAATGGAGCAAACGCTGCCT
GGAGGAAACGAACTGGGACTATCCGCGTGCCGAGTTTGCGTTCGCCGAGCTACACAAACA
GAACCGGATACCGCCGGAAGCGTTCAGAACGAATTAAACCATTTTTGTAGGCGGAATGTA
GCGGAAAGTAATTCATCAATCATAAGTTAGTTTGTTTTAAGGGTTAGCAGACGTTAGCGG
ACAAATTTGGTCGGTTATTACAATAGGTTTTAGGCTTTCTCGTACAGATCATGCGTTGTA
CTTTTCCCGTTGATTTTTTTTTCTTCCTCACACACACACACACACACACGAACCCAAAGT
AGTGCGCCCGG

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)