cluster # 599

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Anopheles gambiae
cluster # 599 cluster # 599 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_599#0 length = 651 sequences # 1

consensus_599#1 length = 589 sequences # 1

consensusID : consensus_599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGCCGCCCTGCAGACGAAAGTGGCTACTAAACGAGCGGCCACCAGTCCCCCGATAGCATTCCACCCGGAGAGCATTAAGCGCGAGCGGGCCAGCCCCGGTGCCTCGTCCACCTCCTCCACCGGCAGCAGCAGCAACCGATTAGGAGTTAACCTTGGCAACGATCAGCAACATCACGGACAGAACCTATCGCAGTCTGTCACCGGTATCAGTACGCCCGAACAGCTGGCGAAAAATGTCGAGAGCCTCATGAAACTGCACGAGAATCTTTCGTCGATGTCCGCGGCGCACCTACAGCGAACCGCGATGGAAGAACTCAACGGTACACAAGGCTCGACCGCATCACGCGCATCGTTGCTCGGCCACCAATCGGACTCAGTGGATCTGCACGGCTCGGACGGCGAAACGGACACGGACTCGGTACGATCGCACACCAATCATCACGGGCACAGCTTACGCCACAGTCTGCAGCAGCAGCAGCAGCATCACCATCACCAACGGGGACTGACGGACGACAGCTC]

[+] EMBL BM643321             [CCGCCCACGCGTCCGCCCACGCGTCCGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGCCGCCCTGCAGACGAAAGTGGCTACTAAACGAGCGGCCACCAGTCCCCCGATAGCATTCCACCCGGAGAGCATTAAGCGCGAGCGGGCCAGCCCCGGTGCCTCGTCCACCTCCTCCACCGGCAGCAGCAGCAACCGATTAGGAGTTAACCTTGGCAACGATCAGCAACATCACGGACAGAACCTATCGCAGTCTGTCACCGGTATCAGTACGCCCGAACAGCTGGCGAAAAATGTCGAGAGCCTCATGAAACTGCACGAGAATCTTTCGTCGATGTCCGCGGCGCACCTACAGCGAACCGCGATGGAAGAACTCAACGGTACACAAGGCTCGACCGCATCACGCGCATCGTTGCTCGGCCACCAATCGGACTCAGTGGATCTGCACGGCTCGGACGGCGAAACGGACACGGACTCGGTACGATCGCACACCAATCATCACGGGCACAGCTTACGCCACAGTCTGCAGCAGCAGCAGCAGCATCACCATCACCAACGGGGACTGACGGACGACAGCTC]




>consensus_599#0
CCGCCCACGCGTCCGCCCACGCGTCCGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCA
CTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGA
GGATGCCAACACAGCCGCCCTGCAGACGAAAGTGGCTACTAAACGAGCGGCCACCAGTCC
CCCGATAGCATTCCACCCGGAGAGCATTAAGCGCGAGCGGGCCAGCCCCGGTGCCTCGTC
CACCTCCTCCACCGGCAGCAGCAGCAACCGATTAGGAGTTAACCTTGGCAACGATCAGCA
ACATCACGGACAGAACCTATCGCAGTCTGTCACCGGTATCAGTACGCCCGAACAGCTGGC
GAAAAATGTCGAGAGCCTCATGAAACTGCACGAGAATCTTTCGTCGATGTCCGCGGCGCA
CCTACAGCGAACCGCGATGGAAGAACTCAACGGTACACAAGGCTCGACCGCATCACGCGC
ATCGTTGCTCGGCCACCAATCGGACTCAGTGGATCTGCACGGCTCGGACGGCGAAACGGA
CACGGACTCGGTACGATCGCACACCAATCATCACGGGCACAGCTTACGCCACAGTCTGCA
GCAGCAGCAGCAGCATCACCATCACCAACGGGGACTGACGGACGACAGCTC

consensusID : consensus_599#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence

                              [CCGCCGGGCTGGCTGGCCACTCTGGCAAGAACCATCATCATCTGCAGCAACAGGTGCAACAGGCACAGTTTCCGAACAACTCGCCCAACGGTGCGCTCGGTGCAAAGATGCCAATGTTCGATGCTTCGGCCATGGGCTACGGAGCGTCCTTCTTTTGGCCCCACTCAACCGGCTTCAGTGGGATGCCCGGCGTTGACTATGCCCGCAGCCAACCCGCACCAGACGTGTTTAGCTCCCCGACGCTTATGCAACGCTTCCAGCAGGAAGCCACGGCCAGTGCACTGTCGCCAGCCGACTCGCGACATTTTCCGGGTGGAAAGGCGAGTTCGGCCGGCGTTGGTAGCACCAATGCGAATCTGACCGCCCTGCCCAAGGGCAGCAGTGTGCGTGAGATGGCTGAACAGCTGTACGACGGCAGCGGTGCCAACGGAGGCTCCTTTCTGGATGACATTATTCGGCAAAGCCTCGACAAAAAGTCCGGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGC]

[+] EMBL BM620891             [CCGCCGGGCTGGCTGGCCACTCTGGCAAGAACCATCATCATCTGCAGCAACAGGTGCAACAGGCACAGTTTCCGAACAACTCGCCCAACGGTGCGCTCGGTGCAAAGATGCCAATGTTCGATGCTTCGGCCATGGGCTACGGAGCGTCCTTCTTTTGGCCCCACTCAACCGGCTTCAGTGGGATGCCCGGCGTTGACTATGCCCGCAGCCAACCCGCACCAGACGTGTTTAGCTCCCCGACGCTTATGCAACGCTTCCAGCAGGAAGCCACGGCCAGTGCACTGTCGCCAGCCGACTCGCGACATTTTCCGGGTGGAAAGGCGAGTTCGGCCGGCGTTGGTAGCACCAATGCGAATCTGACCGCCCTGCCCAAGGGCAGCAGTGTGCGTGAGATGGCTGAACAGCTGTACGACGGCAGCGGTGCCAACGGAGGCTCCTTTCTGGATGACATTATTCGGCAAAGCCTCGACAAAAAGTCCGGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGC]




>consensus_599#1
CCGCCGGGCTGGCTGGCCACTCTGGCAAGAACCATCATCATCTGCAGCAACAGGTGCAAC
AGGCACAGTTTCCGAACAACTCGCCCAACGGTGCGCTCGGTGCAAAGATGCCAATGTTCG
ATGCTTCGGCCATGGGCTACGGAGCGTCCTTCTTTTGGCCCCACTCAACCGGCTTCAGTG
GGATGCCCGGCGTTGACTATGCCCGCAGCCAACCCGCACCAGACGTGTTTAGCTCCCCGA
CGCTTATGCAACGCTTCCAGCAGGAAGCCACGGCCAGTGCACTGTCGCCAGCCGACTCGC
GACATTTTCCGGGTGGAAAGGCGAGTTCGGCCGGCGTTGGTAGCACCAATGCGAATCTGA
CCGCCCTGCCCAAGGGCAGCAGTGTGCGTGAGATGGCTGAACAGCTGTACGACGGCAGCG
GTGCCAACGGAGGCTCCTTTCTGGATGACATTATTCGGCAAAGCCTCGACAAAAAGTCCG
GCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGA
CGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_599#0      CCGCCCACGCGTCCGCCCACGCGTCCGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCA 60
consensus_599#1      --------CCGCCGGGCTGGCTGGCCAC--TCTGGCAAGAACCATCATCATCTGCAGCAA 50
                              ** * * *     * ** *    * ** **   **      *** *    *

consensus_599#0      CTTGTTGAAAGG---CAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAG-TG 116
consensus_599#1      CAGGTGCAACAGGCACAGTTTCCGAACAACTCGCCCAACGGTGCGCTCGGTGCAAAGATG 110
                     *  **  **  *   **   * *** * **   * *  * * * **** ***   ** **

consensus_599#0      CCGAGGATGCCAACACAGCCGCCCTGCAGACGAAAGTGGCTACTAAACGAGCGGCCACCA 176
consensus_599#1      CCAATGTT--CGATGCTTCGGCCATG--GGCTACGGAGCGTCCTTCTTTTGGCCCCACTC 166
                     ** * * *  * *  *  * *** **  * * *  * *  * **      *   ****  

consensus_599#0      GTCCCCCGATAGCATTCCACCCGGAGAGCATTAAGCGCG-AGCGGGCCAGCCCCGGTGCC 235
consensus_599#1      AACCGGCTTCAGTGGGATGCCCGGCGTTGACTATGCCCGCAGCCAACCCGCACCAGA--C 224
                       **  *   **       ***** *   * ** ** ** ***   ** ** ** *   *

consensus_599#0      TCGTCCACCTCCTCCACCGGCAGCAGCAGCAACCGATTAGGAGTTAACCTTGGCAACGAT 295
consensus_599#1      GTGTTTAGCTCCCCGAC--GCTTATGCAACG--CTTCCAGCAGGAAGCCACGGC--CAGT 278
                       **  * **** * **  **    *** *   *    ** **  * **  ***  *  *

consensus_599#0      CAGCAACATCACGGACAGAACCTATCGCAGTCTGTCACCGGTATCAGTACGCCCGAACAG 355
consensus_599#1      --GCACTGTCGCCAGCCGA--CTCGCGACATTTTCCGGGTGGAAAGGCGAGTTCGGCCGG 334
                       ***   ** *   * **  **  **   * *  *    * *   *   *  **  * *

consensus_599#0      C-TGGCGAAAAATGTCGAGAGCCTCATGAAACTGCACGAGAATCTTTCGTCGATGTCCGC 414
consensus_599#1      CGTTGGTAGCACCAATGCGAATCTGACCGCCCTGCCCAAGGG-----CAGCAGTGTGCGT 389
                     * * *  *  *     * **  ** *     **** * **       *  *  *** ** 

consensus_599#0      GGCGCACCTACAGCGAACCGCGATGGAAGAACTCAACGGTACACAAGGCTCGACCGCATC 474
consensus_599#1      GAGATGGCT-----GAACAGC--TGTACGACGGCAGCGGTGCCAACGG--AGGCTCCTTT 440
                     *      **     **** **  ** * **   ** **** *  * **   * *  * * 

consensus_599#0      ACGCGCATCGTTGCTCGGCCACCAATCGGACTCAGTGGATCTGCACGGCTCGGACGGCGA 534
consensus_599#1      CTGGATGACATTATTCGGCAAAGCCTCGA---CAAAAAGTCCG-GCGACTTTGCTAGCCA 496
                       *     * **  ***** *    ***    **     ** *  ** **  *   ** *

consensus_599#0      AACGGACACGGACTCGGTACGATCGCACACCAATCATC-ACGGGC-ACAGCTTACGCCAC 592
consensus_599#1      CA---GTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGC 553
                      *      **  **  *  *  * *   *      * * ***  * ** *    ***  *

consensus_599#0      AGTCTGCAGCAGCAGCAGCAGCATCACCATCACCAACGGGGACTGACGGACGACAGCTC 651
consensus_599#1      GGGCTCCGTGGGCAGTGCCGAGGATGCCAACAC-AGC---------------------- 589
                      * ** *    ****   *       *** *** * *