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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1156 fasta sequence
[AGCACAACAGCAAGCCAACCAGCTCTGTAAAGTAATGTCGAAAAACTGATCAACCGAACGACCATCTACGAACATCTGCTGGATGAGCCGGAGAGTGCGTGATTGTGCGATCGCTGTTCNCGTGGGATGTACGACGCTGCTGGAGCAAGCCTCAACCTTTCGCTGCTTTGCTGGAGCGTTTCAGCACAGATCGGGGTCAACTTGACGCCTCGGTTTGGCGGGAAACGTCCCGGTCACACTGATTCATCCGGTTGACCCGTCCAGC-GAAAGAAGAAGCGAGCTTCAGCTGTTGTGCCCTTTCACACAGCGCGCAAAATCACACAACTCTGGATCGTTCTACCCTATAACAATGGCGGGAAGGAAAGGAATTGGTGCTTTAGTCTGGTCCCAAGAGAGAGAGAGAGGAAAAAAACCACTGCCCATCACCGGAAAGCGACTGTTCAGCTCAAGTGTTTCACATTAACAGAAAAACACACAACGTTCCTACCTCTGCTACAGGGGCAGACACAGTCAACTTCCGGAGACGGGCA-ACGATTTTTTTTTTTTTTGGTTTCATTTTTGGACAGAGAAAGCCCATCCGTC-CCACTGGCATTAGCCCGCCAAATGCTCATAGACGAATGTGTTGTGCGGGAATGCGGAGCAAACCAAACCTAGCAATTCTCTGCAACTGCACC-ATCCATCCCACATTCAGCATTGTTTTCTTGTTATATAGATTTAAAAAAAAAAAACCCGCG-AACAACAGTAGCAAACTGAAATACCAAAATGCTTAGCTGCGCAACGAACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGAAAGTTGGGCGACCGGTGCGCTGATNAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTGCCGGGGCACTTCTCCCTTTTGGGGAAGCNGAACAAGAAGAAGAAGAAGACGAAGATTGGTGTAAATATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCAACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAGAAAAAAAGAGAAGGAACGCCGCTTTAGCTACAGCAGCTGCGACGAAGCAACGAAGCAGTAAAAGTTATAGAAAAACGCATCCCAAAATCAAAC]
[+] EMBL BX628321 [AGCACAACAGCAAGCCAACCAGCTCTGTAAAGTAATGTCGAAAAACTGATCAACCGAACGACCATCTACGAACATCTGCTGGATGAGCCGGAGAGTGCGTGATTGTGCGATCGCTGTTCNCGTGGGATGTACGACGCTGCTGGAGCAAGCCTCAACCTTTCGCTGCTTTGCTGGAGCGTTTCAGCACAGATCGGGGTCAACTTGACGCCTCGGTTTGGCGGGAAACGTCCCGGTCACACTGATTCATCCGGTTGACCCGTCCAGC GAAAGAAGAAGCGAGCTTCAGCTGTTGTGCCCTTTCACACAGCGCGCAAAATCACACAACTCTGGATCGTTCTACCCTATAACAATGGCGGGAAGGAAAGGAATTGGTGCTTTAGTCTGGTCCCAAGAGAGAGAGAGAGGAAAAAAACCACTGCCCATCACCGGAAAGCGACTGTTCAGCTCAAGTGTTTCACATTAACAGAAAAACACACAACGTTCCTACCTCTGCTACAGGGGCAGACACAGTCAACTTCCGGAGACGGGCA ACGATTTTTTTTTTTTTTGGGTTCATTTTTGGACAGAGAAAGNCCATCCGTC CCACTGG ]
[+] EMBL BX619395 [ CTGCTGGATGAGCCGGAGAGTGCGTGATTGTGCGATCGCTGTTCGCGTGGGATGTACGACGCTGCTGGAGCAAGCCTCAACCTTTCGCTGCTTTGCTGGAGCGTTTCAGCACAGATCGGGGTCAACTTGACGCCTCGGTTTGGCGGGAAACGTCCCGGTCACACTGATTCATCCGGTTGACCCGTCCAGCTGAAAGAAGAAGCGAGCTTCAGCTGTTGTGCCCTTTCACACAGCGCGCAAAATCACACAACTCTGGATCGTTCTACCCTATAACAATGGCGGGAAGGAAAGGAATTGGTGCTTTAGTCTGGTCCCAAGAGAGAGAGAGAGGAAAAAAACCACTGCCCATCACCGGAAAGCGACTGTTCAGCTCAAGTGTTTCACATTAACAGAAAAACACACAACGTTCCTACCTCTGCTACAGGGGCAGACACAGTCAACTTCCGGAGACGGGCACACGATTTTTTTTTTTTTTGGTTTCATTTTTGGACAGAGAAAGCCCATCCGTCNCCACTGGCATTAGCCCGCCAAATGCTCATAGACGAATGTGTTGTGCGGGAATGCGGAGCAAACCAAACCTAGCAATTCTCTGCAACTGCACCAATCCAT ]
[+] EMBL BX619801 [ GAGAGGAAAAAAACCACTGCCCATCACCGGAAAGCGACTGTTCAGCTCAAGTGTTTCACATTAACAGAAAAACACACAACGTTCCTACCTCTGCTACAGGGGCAGACACAGTCAACTTCCGGAGACGGGCA ACGA TTTTTTTTTTTTGGTTTCATTTTTGGACAGAGAAAGCCCATCCGTC CCACTGGCATTAGCCCGCCAAATGCTCATAGACGAATGTGTTGTGCGGGAATGCGGAGCAAACCAAACCTAGCAATTCTCTGCAACTGCACC ATCCATCCCACATTCAGCATTGTTTTCTTGTTATATAGATTTAAAAAAAAAAAACCCGCGNAACAACAGTAGCAAACTGAAATACCAAAATGCTTAGCTGCGCAACGAACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGAAAGTTGGGCGACCGGTGCGCTGATNAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTGCCGGGGCACTTCTC ]
[+] EMBL BX620991 [ TTTGGACAGAGAAAGCCCATCCGTC CCACTGGCATTAGCCCGCCAAATGCTCATAGACGAATGTGTTGTGCGGGAATGCGGAGCAAACCAAACCTAGCAATTCTCTGCAACTGCACC ATCCATCCCACATTCAGCATTGTTTTCTTGTTATATAGATTTAAAAAAAAAAAACCCGCG AACAACAGTAGCAAACTGAAATACCAAAATGCTTAGCTGCGCAACGAACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGAAAGTTGGGCGACCGGTGCGCTGATTAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTGCCGGGGCACTTCTCCCTTTTGGGGAAGCNGAACAAGAAGAAGAAGAAGACGAAGATTGGTGTAAATATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCAACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAGAAAAAAAGAGAAGGAACGCCGCTTTAGCTACAGCAGCTGCGACGAAGCAACGAAGCAGTAAAAGTTATAGAAAAACGCATCCCAAAATCAAAC]
consensusID : consensus_6025#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[GCCAGAATCGGCACGAGGGAAATACCAAAATGCTTAGCTGCGCAACGAACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGAAAGTTGGGCGACCGGTGCGCTGATTAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTGCCGGGGCACTTCTCCCTTTTGGGGAAGCAGAACAAGAAGAAGAAGAAGACGAAGATTGGTGTAAAATATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCAACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAAAAAAATAAAAAAAAAAA]
[+] EMBL BX467544 [GCCAGAATCGGCACGAGGGAAATACCAAAATGCTTAGCTGCGCAACGAACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGAAAGTTGGGCGACCGGTGCGCTGATTAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTGCCGGGGCACTTCTCCCTTTTGGGGAAGCAGAACAAGAAGAAGAAGAAGACGAAGATTGGTGTAAAATATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCAACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAAAAAAATAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6025#0 AGCACAACAGCAAGCCAACCAGCTCTGTAAAGTAATGTCGAAAAACTGATCAACCGAACG 60
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 ACCATCTACGAACATCTGCTGGATGAGCCGGAGAGTGCGTGATTGTGCGATCGCTGTTCN 120
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 CGTGGGATGTACGACGCTGCTGGAGCAAGCCTCAACCTTTCGCTGCTTTGCTGGAGCGTT 180
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 TCAGCACAGATCGGGGTCAACTTGACGCCTCGGTTTGGCGGGAAACGTCCCGGTCACACT 240
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 GATTCATCCGGTTGACCCGTCCAGCGAAAGAAGAAGCGAGCTTCAGCTGTTGTGCCCTTT 300
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 CACACAGCGCGCAAAATCACACAACTCTGGATCGTTCTACCCTATAACAATGGCGGGAAG 360
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 GAAAGGAATTGGTGCTTTAGTCTGGTCCCAAGAGAGAGAGAGAGGAAAAAAACCACTGCC 420
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 CATCACCGGAAAGCGACTGTTCAGCTCAAGTGTTTCACATTAACAGAAAAACACACAACG 480
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 TTCCTACCTCTGCTACAGGGGCAGACACAGTCAACTTCCGGAGACGGGCAACGATTTTTT 540
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 TTTTTTTTGGTTTCATTTTTGGACAGAGAAAGCCCATCCGTCCCACTGGCATTAGCCCGC 600
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 CAAATGCTCATAGACGAATGTGTTGTGCGGGAATGCGGAGCAAACCAAACCTAGCAATTC 660
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 TCTGCAACTGCACCATCCATCCCACATTCAGCATTGTTTTCTTGTTATATAGATTTAAAA 720
consensus_6025#1 ------------------------------------------------------------
consensus_6025#0 AAAAAAAACCCGCGAACAACAGTAGCAAACTGAAATACCAAAATGCTTAGCTGCGCAACG 780
consensus_6025#1 -----------GCCAGAATCGGCACGAGG--GAAATACCAAAATGCTTAGCTGCGCAACG 47
** * * * * * * *****************************
consensus_6025#0 AACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGA 840
consensus_6025#1 AACAAACTAAAAAAAATGGAAAGGAAGGCAAGGGAAGTGCCCGAAAGGAAAAGGCTAGGA 107
************************************************************
consensus_6025#0 AAGTTGGGCGACCGGTGCGCTGATNAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTG 900
consensus_6025#1 AAGTTGGGCGACCGGTGCGCTGATTAGTTCCTGGTTCCGATTCACCACTCCACCCCTTTG 167
************************ ***********************************
consensus_6025#0 CCGGGGCACTTCTCCCTTTTGGGGAAGCNGAACAAGAAGAAGAAGAAGACGAAGATTGGT 960
consensus_6025#1 CCGGGGCACTTCTCCCTTTTGGGGAAGCAGAACAAGAAGAAGAAGAAGACGAAGATTGGT 227
**************************** *******************************
consensus_6025#0 GTAAA-TATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCA 1019
consensus_6025#1 GTAAAATATCGAAGTGCCGAACATTTCAAGATTTTTTGTTTTATTCTAGCCACCGCCCCA 287
***** ******************************************************
consensus_6025#0 ACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAGAAAAAAAGAGAAGGAA 1079
consensus_6025#1 ACTCCAACGCAAACTCGTTCGAAGTGAAAAAGAAGAAGAAGTAAAAAAATAAAAAAAAAA 347
******************************************* ***** * * ** **
consensus_6025#0 CGCCGCTTTAGCTACAGCAGCTGCGACGAAGCAACGAAGCAGTAAAAGTTATAGAAAAAC 1139
consensus_6025#1 A----------------------------------------------------------- 348
consensus_6025#0 GCATCCCAAAATCAAAC 1156
consensus_6025#1 -----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||