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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6218#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 849 fasta sequence
[ATATATGATGTAGTTAAATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTGAGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCTATATCCTTTGTCCACACACACACCGTTCTAAAGTTTGCGCTGCTTCGGATGCTGTTACCTAGCCTTTCATGCAGGTAGTGGATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGGAAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCAGGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACCAAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAGCATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGAGATACATGCGCTTGTGAC-AAATAAAATCTGCACAGCGTGTTACTCCGTAGCGGGAATTGGAACAGGTAATCGCTTTCAT]
[+] EMBL BX612096 [ATATATGATGTAGTTAAATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTGAGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCTATATCCTTTGTCCACACACACACCGTTCTAAAGTTTGCGCTGCTTCGGATGCTGTTACCTAGCCTTTCATGCAGGTAGTGGATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAG ]
[+] EMBL BX610359 [ ATTTGAGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCTATATCCTTTGTCCACACACACACCGTTCTAAAGTTTGCGCTGCTTCGGATGCTGTTACCTAGCCTTTCATGCAGGTAGTGGATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGGAAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCAGGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACCAAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAGCATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGAGATACATGCGCTTGTGAC AAATAA ]
[+] EMBL BX609200 [ AAGAAGATAAAACACTCTTAAACGTTGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCTATATCCTTTGTCCACACACACACCGTTCTAAAGTTTGCGCTGCTTCGGATGCTGTTACCTAGCCTTTCATGCAGGTAGTGGATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGGAAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCAGGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACCAAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAGCATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGAGATACATGCGCTTGTGACAAAATAAAATCTGCACAGCGTGTTACTCCGTAGCGGGAATTGGAACAGGTAATCGCTTTCAT]
consensusID : consensus_6218#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 668 fasta sequence
[ATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTGAGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGGAAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCAGGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACCAAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAGCATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGA]
[+] EMBL BX609032 [ATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTGAGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGGGCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCCACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGTTGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGTTTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGGAAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCAGGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACCAAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAGCATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGA]
[+] EMBL BX616516 [ atgGAGTTAAGAAGAAAAAACACTCTGAAACGAAGCAGCGAACACCGGTGACAATGCTCACAATCAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCAGGACGGGCTCATCAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6218#0 ATATATGATGTAGTTAAATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTG 60
consensus_6218#1 -----------------ATGACGTAACGGACCAAACTATTGTTTTTCTGTTAAAAATTTG 43
*******************************************
consensus_6218#0 AGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAAT 120
consensus_6218#1 AGTTAAGAAGATAAAACACTCTTAAACGATGCAGCGAACACCGGTGACAATGCTCACAAT 103
************************************************************
consensus_6218#0 CAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGG 180
consensus_6218#1 CAGCATCTCGCAGCATTGAAGAATCTACTGAAACGAACAGTCCACCTACCAGCATGACGG 163
************************************************************
consensus_6218#0 GCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCC 240
consensus_6218#1 GCTCATCAACCCACGCTCGTCGTGTTTTGTTCAAGCGTGTGGAAAGCGCTGGTGGAAGCC 223
************************************************************
consensus_6218#0 ACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGT 300
consensus_6218#1 ACGGCGTATGACATTCCACTCCATGGTAACACTGGTGACTTGCAACGGTCGGCATGCAGT 283
************************************************************
consensus_6218#0 TGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATATATCTATATCCTTTGTCCACAC 360
consensus_6218#1 TGGTACCAAGTGGTAGAACAAGAACAAAAAAACCGATAT--------------------- 322
***************************************
consensus_6218#0 ACACACCGTTCTAAAGTTTGCGCTGCTTCGGATGCTGTTACCTAGCCTTTCATGCAGGTA 420
consensus_6218#1 ------------------------------------------------------------
consensus_6218#0 GTGGATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGT 480
consensus_6218#1 ----ATCAATTACAAGCAGAAAAAAAAGATAGAAGCAGATGTCACGCGGCACAAAATTGT 378
********************************************************
consensus_6218#0 TTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGG 540
consensus_6218#1 TTTTCATTTAAAAAGTTTTTTGGTCGCGTACATTGCGTTAGAAAATCGGTTAAAAAAAGG 438
************************************************************
consensus_6218#0 AAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCA 600
consensus_6218#1 AAAAAGGACTGTAAAAACACACACACGCTGAGAGAGCTTCATCATATAACAACGACAGCA 498
************************************************************
consensus_6218#0 GGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACC 660
consensus_6218#1 GGGCAATTGAAACAGGTTAGTCAGGTGTGCTCTGTCTGACAAGAAATAGCAACAAAAACC 558
************************************************************
consensus_6218#0 AAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAG 720
consensus_6218#1 AAACGAACACTCTGCAAGGTATCAGTGTCAGTTGCAGTGCGGAAGAGTGTAAGTAAATAG 618
************************************************************
consensus_6218#0 CATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGAGATACATGCG 780
consensus_6218#1 CATCCACTTAACGTCCACTCGATTGGTCGTGTAGTGATATAGTGAAGTGA---------- 668
**************************************************
consensus_6218#0 CTTGTGACAAATAAAATCTGCACAGCGTGTTACTCCGTAGCGGGAATTGGAACAGGTAAT 840
consensus_6218#1 ------------------------------------------------------------
consensus_6218#0 CGCTTTCAT 849
consensus_6218#1 ---------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||