cluster # 6230

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Anopheles gambiae
cluster # 6230 cluster # 6230 Sequences # 5 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6230#0 length = 1137 sequences # 2
consensus_6230#1 length = 722 sequences # 1

consensus_6230#2 length = 552 sequences # 1
consensus_6230#3 length = 433 sequences # 1

consensusID : consensus_6230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1137
fasta sequence

                              [CTAAAAAATGTCGGAAAGAAAAGTTTTAAATAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGCGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAACGCCCGCAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGGATCTATCGGTTCTACATCAAGTGTACGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCGACTACGAGATTGAGGCGGGAGCGACGCGCAACTTTATGGCGCTAAAGCTGGCTGAGGAGCAGGCCCGGCGGGAGGAGGAGGAAGCGCGCGAAGAGGAAGCGACCAATCCGATGAAGCTGCTCGAGAACCGAACGCAACAGTCGAGGAACGAGATTGAGCTGCTGGAATCGCTGGAGGAACTGCGGGACTTGAACCGCCGCCAACAGGACATCGACTACGACAGTATGCTGCAGCAGTTTGACCGGTCGGAGAGTATACGCGAGCGTGAGGAACGATTGGAGCGCCAGGATGAGGAGTACATCAAATCTATTAAATTTCAAAACAAACCGACCGTAAAGCGAGTAGCGTCGGAAATTATTGTCGAAGAGGTTAAGGAGGAAAAACAGGACGAAGGTACCACGGCTACTACATCGGAAGGCAGTAGGCCGAGCAGCACCTCCACAGTCACCTCAGCGGCAGCCAGCATGAGCGGGCCACCATCGTTTGCCACCAGCAAGGCCCGCAAGCTAGACAACTTCAGCATCGGCGTGAAAAAGACAACGCTCAGCAATTTGGTGGTCAAGCGGAAGGAAATGCCACCACCGAAAGCGCCCCCGCCGGTGGCCAGCGTGACAGGGCAGGGCACATCCGCTACACAGCCTACAGTGCCGGAGCCAAAAGTGAGCCAAACCGCAGCAACAGGAAGCAGTGGCATCGGAAGCTTGGGTCTGCTCGGAGCGTACTCGGACAGTGACGAGGGATCGGATGAGAATTGAACAAAAGGCAGTTTTATTGTGACACGATTTCGAAACAAAGCTTTTATCAGCCCCCCTTATGCGGCCTGTCCATTGAATACAACGTG]

[+] EMBL CNS08JJ7             [CTAAAAAATGTCGGAAAGAAAAGTTTTAAATAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGCGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAACGCCCGCAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGGATCTATCGGTTCTACATCAAGTGTACGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCGACTACGAGATTGAGGCGGGAGCGACGCGCAACTTTATGGCGCTAAAGCTGGCTGAGGAGCAGGCCCGGCGGGAGGAGGAGGAAGCGCGCGAAGAGGAAGCGACCAATCCGATGAAGCTGCTCGAGAACCGAACGCAACAGTCGAGGAACGAGATTGAGCTGCTGGAATCGCTGGAGGAACTGCGGGACTTGAACCGCCGCCAACAGGACATCGACTACGACAGTATGCTGCAGCAGTTTGACCGGTCGGAGAGTATACGCGAGCGTGAGGAACGATTGGAGCGCCAGGATGAGGAGTACATCAAATCTATTAAATTTCAAAACAAACCGACCGTAAAGCGAGTAGCGTCGGAAATTATTGTCGAAGAGGTTAAGGAGGAAAAACAGGACGAAGGTACCACGGCTACTACATCGGAAGGCAGTAGGCCGAGCAGCACCTCCACAGTCACCTCAGCGGCAGCCAGCATGAGCGGGCCACCATCGTTTGCCACCAGCAAGGCCCGCAAGCTAGACAACTTCAGCATCGGCGTGAAAAAGACAACGCTCAGCAATTTGGTGGTCAAGCGGAAGGAAATGCCACCACCGAAAGCGCCCCCGCCGGTGGCCAGCGTGACAGGGCAGGGCACATCCGCTACACAGCCTACAGT                                                                                                                                                                                                   ]
[-] EMBL CNS08JJ8             [                                                                                                                                                                                                                                                                                           CCGCGCAACACCGACTACGAGATTGAGGCGGGAGCGACGCGCAACTTTATGGCGCTAAAGCTGGCTGAGGAGCAGGCCCGGCGGGAGGAGGAGGAAGCGCGCGAAGAGGAAGCGACCAATCCGATGAAGCTGCTCGAGAACCGAACGCAACAGTCGAGGAACGAGATTGAGCTGCTGGAATCGCTGGAGGAACTGCGGGACTTGAACCGCCGCCAACAGGACATCGACTACGACAGTATGCTGCAGCAGTTTGACCGGTCGGAGAGTATACGCGAGCGTGAGGAACGATTGGAGCGCCAGGATGAGGAGTACATCAAATCTATTAAATTTCAAAACAAACCGACCGTAAAGCGAGTAGCGTCGGAAATTATTGTCGAAGAGGTTAAGGAGGAAAAACAGGACGAAGGTACCACGGCTACTACATCGGAAGGCAGTAGGCCGAGCAGCACCTCCACAGTCACCTCAGCGGCAGCCAGCATGAGCGGGCCACCATCGTTTGCCACCAGCAAGGCCCGCAAGCTAGACAACTTCAGCATCGGCGTGAAAAAGACAACGCTCAGCAATTTGGTGGTCAAGCGGAAGGAAATGCCACCACCGAAAGCGCCCCCGCCGGTGGCCAGCGTGACAGGGCAGGGCACATCCGCTAAACAGCCTACAGTGCCGGAGCCAAAAGTGAGCCAAACCGCAGCAACAGGAAGCAGTGGCATCGGAAGCTTGGGTCTGCTCGGAGCGTACTCGGACAGTGACGAGGGATCGGATGAGAATTGAACAAAAGGCAGTTTTATTGTGACACGATTTCGAAACAAAGCTTTTATCAGCCCCCCTTATGCGGCCTGTCCATTGAATACAACGTG]




>consensus_6230#0
CTAAAAAATGTCGGAAAGAAAAGTTTTAAATAAATATTACCCGCCGGACTTTGATCCGTC
GAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACC
GTTCAACATGCGCTGCGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAACGC
CCGCAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGGATCTATCGGTTCTACAT
CAAGTGTACGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCGACTA
CGAGATTGAGGCGGGAGCGACGCGCAACTTTATGGCGCTAAAGCTGGCTGAGGAGCAGGC
CCGGCGGGAGGAGGAGGAAGCGCGCGAAGAGGAAGCGACCAATCCGATGAAGCTGCTCGA
GAACCGAACGCAACAGTCGAGGAACGAGATTGAGCTGCTGGAATCGCTGGAGGAACTGCG
GGACTTGAACCGCCGCCAACAGGACATCGACTACGACAGTATGCTGCAGCAGTTTGACCG
GTCGGAGAGTATACGCGAGCGTGAGGAACGATTGGAGCGCCAGGATGAGGAGTACATCAA
ATCTATTAAATTTCAAAACAAACCGACCGTAAAGCGAGTAGCGTCGGAAATTATTGTCGA
AGAGGTTAAGGAGGAAAAACAGGACGAAGGTACCACGGCTACTACATCGGAAGGCAGTAG
GCCGAGCAGCACCTCCACAGTCACCTCAGCGGCAGCCAGCATGAGCGGGCCACCATCGTT
TGCCACCAGCAAGGCCCGCAAGCTAGACAACTTCAGCATCGGCGTGAAAAAGACAACGCT
CAGCAATTTGGTGGTCAAGCGGAAGGAAATGCCACCACCGAAAGCGCCCCCGCCGGTGGC
CAGCGTGACAGGGCAGGGCACATCCGCTACACAGCCTACAGTGCCGGAGCCAAAAGTGAG
CCAAACCGCAGCAACAGGAAGCAGTGGCATCGGAAGCTTGGGTCTGCTCGGAGCGTACTC
GGACAGTGACGAGGGATCGGATGAGAATTGAACAAAAGGCAGTTTTATTGTGACACGATT
TCGAAACAAAGCTTTTATCAGCCCCCCTTATGCGGCCTGTCCATTGAATACAACGTG

consensusID : consensus_6230#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence

                              [AAGAATTGCCCGAGGTTAAATGTAAACAAACATTCCTGCCTTGTAGTCTGGTGCTNAATTTGCTAAAAAAATGTCGGAAAGAANAGTTTTAAACAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAACGCGCGTAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGAATCTATCGATTCTACATCAAGTGTACTGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCGACTACGGAGATTGAGGCGGGAGCGACACGCGCAACTTTATGGCGCTCCAAGCTGGCCCGAGGAGCAGGCCCGGGGGAGCGAGGAGGAAGCGCGCGAAGAGGAAGGCGACCAATCCGATGAAGCTGCTCGAGAACCGANACGCAACCAGTCGAGGAACCGGAGATCGAGCTGCTGGCACATCGCCTGGGAGGGAGGCTGACGGTGACTTGAAACCTGCCGCAAACAGGACACTCGACTACGAACAGTCATGCCTCGCAGCAGTAATGAACCGGTCNGAGAGTATACGCGAGCGTGAAGGGAAACGATTGGAGGCNCCANGACGAAGGAATACATCAAACATCTATTTACATTTCAAAANNCCA]

[+] EMBL AL929962             [AAGAATTGCCCGAGGTTAAATGTAAACAAACATTCCTGCCTTGTAGTCTGGTGCTNAATTTGCTAAAAAAATGTCGGAAAGAANAGTTTTAAACAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAACGCGCGTAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGAATCTATCGATTCTACATCAAGTGTACTGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCGACTACGGAGATTGAGGCGGGAGCGACACGCGCAACTTTATGGCGCTCCAAGCTGGCCCGAGGAGCAGGCCCGGGGGAGCGAGGAGGAAGCGCGCGAAGAGGAAGGCGACCAATCCGATGAAGCTGCTCGAGAACCGANACGCAACCAGTCGAGGAACCGGAGATCGAGCTGCTGGCACATCGCCTGGGAGGGAGGCTGACGGTGACTTGAAACCTGCCGCAAACAGGACACTCGACTACGAACAGTCATGCCTCGCAGCAGTAATGAACCGGTCNGAGAGTATACGCGAGCGTGAAGGGAAACGATTGGAGGCNCCANGACGAAGGAATACATCAAACATCTATTTACATTTCAAAANNCCA]




>consensus_6230#1
AAGAATTGCCCGAGGTTAAATGTAAACAAACATTCCTGCCTTGTAGTCTGGTGCTNAATT
TGCTAAAAAAATGTCGGAAAGAANAGTTTTAAACAAATATTACCCGCCGGACTTTGATCC
GTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGC
ACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTAA
CGCGCGTAAGGAGGACGTAGAAAACGAAGACTACCTCGGCATCCGAATCTATCGATTCTA
CATCAAGTGTACTGCGCTGCCTGCAGGAGATCTCGTTCAAGACGGACCCGCGCAACACCG
ACTACGGAGATTGAGGCGGGAGCGACACGCGCAACTTTATGGCGCTCCAAGCTGGCCCGA
GGAGCAGGCCCGGGGGAGCGAGGAGGAAGCGCGCGAAGAGGAAGGCGACCAATCCGATGA
AGCTGCTCGAGAACCGANACGCAACCAGTCGAGGAACCGGAGATCGAGCTGCTGGCACAT
CGCCTGGGAGGGAGGCTGACGGTGACTTGAAACCTGCCGCAAACAGGACACTCGACTACG
AACAGTCATGCCTCGCAGCAGTAATGAACCGGTCNGAGAGTATACGCGAGCGTGAAGGGA
AACGATTGGAGGCNCCANGACGAAGGAATACATCAAACATCTATTTACATTTCAAAANNC
CA

consensusID : consensus_6230#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 552
fasta sequence

                              [AAATGCCTGAGAAAAATCTTATAGAACTAATGACGCTAACGCTCGAACTTGCAAGTTATGCGGTGCCGTTTGACATGCGATGCCTTAAATGCAACGCGCATATTGTGGAAGGTACAACGTTTCCAGCGCGCGAAGTCGATAGTTCTTGTGCTTTCATGGATGAGTTAACAACATACTTTAAGTGTGTGCATTGCAACAATGAAATTGTGGTCCGTTATACTTTGTACAACGGACGTAACAATTCCCAAACAAAGCTCATCAAAGGAGCCGTACAGGTTCTGCTGCCGGAACAGCAAACCAAACAGAAAGTGAACCTAGCTCAGAGAAAAGCTAATGTAAACTACCTTCAGGTGTCATCATGGCATTGTTTCTACAAGGCAAAGTTAAATAACAAATAAAGAGAAACAACGATTTTACCTTATGCCATGCGACAACGTTGTATTCAATGGACAGGCCGCATAAGGGGGGCTGATAAAAGCTTTGTTTCGAAATCGTGTCACAATAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGGGG]

[+] EMBL CNS08JLW             [AAATGCCTGAGAAAAATCTTATAGAACTAATGACGCTAACGCTCGAACTTGCAAGTTATGCGGTGCCGTTTGACATGCGATGCCTTAAATGCAACGCGCATATTGTGGAAGGTACAACGTTTCCAGCGCGCGAAGTCGATAGTTCTTGTGCTTTCATGGATGAGTTAACAACATACTTTAAGTGTGTGCATTGCAACAATGAAATTGTGGTCCGTTATACTTTGTACAACGGACGTAACAATTCCCAAACAAAGCTCATCAAAGGAGCCGTACAGGTTCTGCTGCCGGAACAGCAAACCAAACAGAAAGTGAACCTAGCTCAGAGAAAAGCTAATGTAAACTACCTTCAGGTGTCATCATGGCATTGTTTCTACAAGGCAAAGTTAAATAACAAATAAAGAGAAACAACGATTTTACCTTATGCCATGCGACAACGTTGTATTCAATGGACAGGCCGCATAAGGGGGGCTGATAAAAGCTTTGTTTCGAAATCGTGTCACAATAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGGGG]




>consensus_6230#2
AAATGCCTGAGAAAAATCTTATAGAACTAATGACGCTAACGCTCGAACTTGCAAGTTATG
CGGTGCCGTTTGACATGCGATGCCTTAAATGCAACGCGCATATTGTGGAAGGTACAACGT
TTCCAGCGCGCGAAGTCGATAGTTCTTGTGCTTTCATGGATGAGTTAACAACATACTTTA
AGTGTGTGCATTGCAACAATGAAATTGTGGTCCGTTATACTTTGTACAACGGACGTAACA
ATTCCCAAACAAAGCTCATCAAAGGAGCCGTACAGGTTCTGCTGCCGGAACAGCAAACCA
AACAGAAAGTGAACCTAGCTCAGAGAAAAGCTAATGTAAACTACCTTCAGGTGTCATCAT
GGCATTGTTTCTACAAGGCAAAGTTAAATAACAAATAAAGAGAAACAACGATTTTACCTT
ATGCCATGCGACAACGTTGTATTCAATGGACAGGCCGCATAAGGGGGGCTGATAAAAGCT
TTGTTTCGAAATCGTGTCACAATAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTG
CCCGGGCTGGGG

consensusID : consensus_6230#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence

                              [TAGTTCGGTGCTGAATTTGCTAAAAAAATGTCGTAAAGAAAAGTTNNTAAACAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTANNGCGCGTAAGGAGGACGTANGAAAANGAAGACTACCTCGGCATCCGANNCTATCGATTCNNCATCAAGTGTACGCGCTGCCTGCAAGGAGATCTCGTTCAAAGACGGAACCCGCGCAACAACCGACTACGAGATTGAAGGCGGGAAGCGAACGCGCANACTTTAATGGCGCTCANAGCTGGGCCGAGGAGCAAGGCCCGGCGGGAGGAAGGAAANGAAAACGCGCGNAAAAAAGG]

[+] EMBL BX619546             [TAGTTCGGTGCTGAATTTGCTAAAAAAATGTCGTAAAGAAAAGTTNNTAAACAAATATTACCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGGGAAAAAGTTTANNGCGCGTAAGGAGGACGTANGAAAANGAAGACTACCTCGGCATCCGANNCTATCGATTCNNCATCAAGTGTACGCGCTGCCTGCAAGGAGATCTCGTTCAAAGACGGAACCCGCGCAACAACCGACTACGAGATTGAAGGCGGGAAGCGAACGCGCANACTTTAATGGCGCTCANAGCTGGGCCGAGGAGCAAGGCCCGGCGGGAGGAAGGAAANGAAAACGCGCGNAAAAAAGG]




>consensus_6230#3
TAGTTCGGTGCTGAATTTGCTAAAAAAATGTCGTAAAGAAAAGTTNNTAAACAAATATTA
CCCGCCGGACTTTGATCCGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTA
CACGGTCCGGCTGATGGCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTA
CAAAGGGAAAAAGTTTANNGCGCGTAAGGAGGACGTANGAAAANGAAGACTACCTCGGCA
TCCGANNCTATCGATTCNNCATCAAGTGTACGCGCTGCCTGCAAGGAGATCTCGTTCAAA
GACGGAACCCGCGCAACAACCGACTACGAGATTGAAGGCGGGAAGCGAACGCGCANACTT
TAATGGCGCTCANAGCTGGGCCGAGGAGCAAGGCCCGGCGGGAGGAAGGAAANGAAAACG
CGCGNAAAAAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6230#1      AAGAATTGCCCGAGGTTAAATGTAAACAAACATTCCTGCCTTGTAGTCTGGTGCTNAATT 60
consensus_6230#3      -------------------------------------------TAGTTCGGTGCTGAATT 17
consensus_6230#0      ------------------------------------------------------------
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      TGCTAAAAAAATGTCGGAAAGAANAGTTTT-AAACAAATATTACCCGCCGGACTTTGATC 119
consensus_6230#3      TGCTAAAAAAATGTCGTAAAGAAAAGTTNNTAAACAAATATTACCCGCCGGACTTTGATC 77
consensus_6230#0      ---CTAAAAAATGTCGGAAAGAAAAGTTTT-AAATAAATATTACCCGCCGGACTTTGATC 56
consensus_6230#2      --------AAATGCCTGAGAAAAATCTTATAGAACTAATGA----CGCTAACGCTCGAAC 48
                              ***** *  * * **   **    **  ***      ***      * ** *

consensus_6230#1      CGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATG- 178
consensus_6230#3      CGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATG- 136
consensus_6230#0      CGTCGAAAATCCCGCGGGTGAAGCTGCCAAAGAATCGACAGTACACGGTCCGGCTGATG- 115
consensus_6230#2      --TTGCAAGTTATGCGGTGCCGTTTGACATGCGATGCCTTAAATGCAACGCGCATATTGT 106
                        * * ** *   ****       ** **    **       *  *    **  *  ** 

consensus_6230#1      GCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGG-GAAAAAGTT 237
consensus_6230#3      GCACCGTTCAACATGCGCTGTGTGACCTGCGGAGAGTACATCTACAAAGG-GAAAAAGTT 195
consensus_6230#0      GCACCGTTCAACATGCGCTGCGTGACCTGCGGAGAGTACATCTACAAAGG-GAAAAAGTT 174
consensus_6230#2      GGAAGGTACAACGTTTCCAGCGCGCGAAGTCGATAGTTCTTGTGCTTTCATGGATGAGTT 166
                      * *  ** **** *   * * * *    *  ** *** * * * *      * *  ****

consensus_6230#1      TAACGCGCGTAAGGAGGACGTAG-AAAACGAAGACTACCTCGGCATCCGAATCTATCGAT 296
consensus_6230#3      TANNGCGCGTAAGGAGGACGTANGAAAANGAAGACTACCTCGGCATCCGANNCTATCGAT 255
consensus_6230#0      TAACGCCCGCAAGGAGGACGTAG-AAAACGAAGACTACCTCGGCATCCGGATCTATCGGT 233
consensus_6230#2      AACAACATACTTTAAGTGTGTGC-ATTGCAACAATGAAATTGTGGTCCG---TTATACTT 222
                       *   *        **   **   *     *  *  *  * *   ****    ***   *

consensus_6230#1      TCTACATCAAGTGTACTGCGCTGCCTGCA-GGAGATCTCGTTCAA-GA-CGGA-CCCGCG 352
consensus_6230#3      TCNNCATCAAGTGTAC-GCGCTGCCTGCAAGGAGATCTCGTTCAAAGA-CGGAACCCGCG 313
consensus_6230#0      TCTACATCAAGTGTAC-GCGCTGCCTGCA-GGAGATCTCGTTCAA-GA-CGGA-CCCGCG 288
consensus_6230#2      TGTACAACGGACGTAA--CAATTCCCAAA--CAAAGCTCATCAAAGGAGCCGTACAGGTT 278
                      *   ** *    ***   *  * **   *   * * *** *  ** ** * *  *  *  

consensus_6230#1      CAACA-CCGACTACGGAGATTGAGGCGGGA-GCGA-CACGCGCAACTTTATGGCGCTCCA 409
consensus_6230#3      CAACAACCGACTACGAGATTGAAGGCGGGAAGCGAACGCGCANACTTTAATGGCGCTCAN 373
consensus_6230#0      CAACA-CCGACTACGAGA-TTGAGGCGGGA-GCGA---CGCGCAACTTTATGGCGCT-AA 341
consensus_6230#2      CTGCTGCCGGA-ACAGCAAACCAAACAGAAAGTGA----ACCTAGCTCAGAGA-----AA 328
                      *  *  ***   **        *  * * * * **     *  *  *    *        

consensus_6230#1      AGCTGGCCCGAGGAGCAGGCCC-----GGGGGAGCGAGGAGGAAGCGCGCGAAGAGGAAG 464
consensus_6230#3      AGCTGGGCCGAGGAGCAAGGCCCGGCGGGAGGAAGGAAANGAAAACGCGCGNAAAAAAGG 433
consensus_6230#0      AGCTGG-CTGAGGAGCAGGCCC-----GGCGGGAGGAGGAGGAAGCGCGCGAAGAGGAAG 395
consensus_6230#2      AGCTAA--TGTAAACTACCTTC----AGGTGTCATCATGGCATTGTTTCTACAAGGCAAA 382
                      ****     *   *  *    *     ** *     *               *    *  

consensus_6230#1      GCGACCAATCCGATGAAGCTGCTCGAGAACCGANACGCA-ACCAGTCGAGGAACCGGAGA 523
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      -CGACCAATCCGATGAAGCTGCTCGAGAACCGAA-CGCA-AC-AGTCGAGGAAC--GAGA 449
consensus_6230#2      GTTAAATAACAAATAAAGAGAAACAACGATTTTACCTTATGCCATGCGACAACGTTGTAT 442
                                                                                  

consensus_6230#1      TCGAGCTGCTGGCACATCGCCTGGGAGGGAGGCTGACGGTGACTTGAAACCTGCCGCAAA 583
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      TTGAGCTGCTGGAATCGCTGGAGGAACTGCGG--------GACTTGAA--CCGCCGCCAA 499
consensus_6230#2      TCAATGGACAGGCCGCATAAGGGGGGCTGATAAAAGCTTTGTTTCGAAATCGTGTCACAA 502
                                                                                  

consensus_6230#1      CAGGACACTCGACTACGAACAGTCATGCCTCGCAGCAGTAATGAACCGGTCNGAGAGTAT 643
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      CAGGACA-TCGACTACGA----CAGTATGCTGCAGCAGT--TTGACCGGTCGGAGAGTAT 552
consensus_6230#2      TAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGC------CCGGGCTGGGG---- 552
                                                                                  

consensus_6230#1      ACGCGAGCGTGAAGGGAAACGATTGGAGGCNCCANGACGAAGGAATACATCAAACATCTA 703
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      ACGCGAGCGTGA---GGAACGATTGGAG-CGCCAGGATGA-GGAGTACATCAAA--TCTA 605
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      TTTACATTTCAAAANNCCA----------------------------------------- 722
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      TTAAATTTCAAAACAAACCGACCGTAAAGCGAGTAGCGTCGGAAATTATTGTCGAAGAGG 665
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      TTAAGGAGGAAAAACAGGACGAAGGTACCACGGCTACTACATCGGAAGGCAGTAGGCCGA 725
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      GCAGCACCTCCACAGTCACCTCAGCGGCAGCCAGCATGAGCGGGCCACCATCGTTTGCCA 785
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      CCAGCAAGGCCCGCAAGCTAGACAACTTCAGCATCGGCGTGAAAAAGACAACGCTCAGCA 845
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      ATTTGGTGGTCAAGCGGAAGGAAATGCCACCACCGAAAGCGCCCCCGCCGGTGGCCAGCG 905
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      TGACAGGGCAGGGCACATCCGCTACACAGCCTACAGTGCCGGAGCCAAAAGTGAGCCAAA 965
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      CCGCAGCAACAGGAAGCAGTGGCATCGGAAGCTTGGGTCTGCTCGGAGCGTACTCGGACA 1025
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ------------------------------------------------------------
consensus_6230#3      ------------------------------------------------------------
consensus_6230#0      GTGACGAGGGATCGGATGAGAATTGAACAAAAGGCAGTTTTATTGTGACACGATTTCGAA 1085
consensus_6230#2      ------------------------------------------------------------
                                                                                  

consensus_6230#1      ----------------------------------------------------
consensus_6230#3      ----------------------------------------------------
consensus_6230#0      ACAAAGCTTTTATCAGCCCCCCTTATGCGGCCTGTCCATTGAATACAACGTG 1137
consensus_6230#2      ----------------------------------------------------