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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6261#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 694 fasta sequence
[CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTTTTACAAAATCTCAATTTATTTAATTATAGGCCCTTACTTTCCCCCGGTTGGGGGGGACTCATATAGTATATCACCCTTCTTTGTAAAAGGTTTCTAGTATAAAACTAAGTTAATGTACATATACAATACAAATAACACATTGTAAATAAAATGCAACAATGCAGGGCACTGCGGTTTAATCAATTTCCAGTTTCCGTAGCGTGCCAAAGAGATCATTGCCATTACTTCGTCGCGACTCATCGATCTTCCAGCGCGTACCATCGGTAATGGAATCGCGTTGCAATTTAATTCTGTTGAACCAATCCTCTTTATGCTTAATGATTGACTGCTCACCACCGTACTCGTCGGGTAGGGCGG-CCTTGGGCAGGTGCGCATAAATCGTTTCCGAGTTGGGGAGATGGAAGTGTAACATTTCGGCCACACGTTTCTTCATGAACGGTTTCACCAGGCACATGACGCGATCCAGAAAAGGCGTACAGTTGATCACATGGATGGCCTTCAGACGCACCGGGTGTGCTTCCTGAGTGTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACGTCTCCACCGTCGTTATCGGGACATCCAGCCTCGGGNCAATTCTTG]
[+] EMBL BM624207 [CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTTTTACAAAATCTCAATTTATTTAATTATAGGCCCTTACTTTCCCCCGGTTGGGGGGGACTCATATAGTATATCACCCTTCTTTGTAAAAGGTTTCTAGTATAAAACTAAGTTAATGTACATATACAATACAAATAACACATTGTAAATAAAATGCAACAATGCAGGGCACTGCGGTTTAATCAATTTCCAGTTTCCGTAGCGTGCCAAAGAGATCATTGCCATTACTTCGTCGCGACTCATCGATCTTCCAGCGCGTACCATCGGTAATGGAATCGCGTTGCAATTTAATTCTGTTGAACCAATCCTCTTTATGCTTAATGATTGACTGCTCACCACCGTACTCGTCGGGTAGGGCGG CCTTGGGCAGGTGCGCATAAATCGTTTCCGAGTTGGGGAGATGGAAGTGTAACATTTCGGCCACACGTTTCTTCATGAACGGTTTCACCAGGCACA ]
[-] EMBL AL932452 [ GTCGGGTAGGGCGGCCCTTGGGCAGGTGCGCATAAATCGTTTCCGAGTTGGGGAGATGGAAGTGTAGCATTTCGGCCACACGTTTCTTCATGAACGGTTTCACCAGGCACATGACGCGATCCAGAAAAGGCGTACAGTTGATCACATGGATGGCCTTCAGACGCACCGGGTGTGCTTCCTGAGTGTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACGTCTCCACCGTCGTTATCGGGACATCCAGCCTCGGGNCAATTCTTG]
consensusID : consensus_6261#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 690 fasta sequence
[GTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACGTCTCCACCGTCGTTCATCGGGACATCCGGTTGGATCATGCGTAGATCGGCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTTATCGGGATCACAATCTACCAAACGATAGTAAATAAACTTGTCCTCACAGCCTTCCACCGACGGTAGGGGCACCATGTCAATTGCTTTTAAAATATTCATCACATTGCTGTTGAGCGGATCGCGGTTATCGAAGATCGTCGGGTTGTTCTGCCGGAGGGTGTAGCCGAGAATGAAAATTTTCTTCGCATACTCGAGATCACCACGGGTCGAGTGAATGTACCGCTGCAGTAATGTTGGATGTATATTCTGGGGCAGATGGGGCTGTGTTGTAATCCAGTCCTTCAACCGTTCCGCTCCCTCTTCTAGATTAAACTCCTTTTCGATGCCCATCGTATAAATGGCGTCGGTACTGTACAACGATTGCAAGCAATCGAACTAAACGAAAAGCAAAGCCACACTGGTAAAGTTAAAAAGCTTTTAAAATAAAACACACAACACCCGGGGGAGGACAAATGTAAGAGTAACACGCGGCCAAACGCTCTGCCAAACCGTGTCCGACCGGGATCANGTCCC]
[-] EMBL BM657487 [GTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACGTCTCCACCGTCGTTCATCGGGACATCCGGTTGGATCATGCGTAGATCGGCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTTATCGGGATCACAATCTACCAAACGATAGTAAATAAACTTGTCCTCACAGCCTTCCACCGACGGTAGGGGCACCATGTCAATTGCTTTTAAAATATTCATCACATTGCTGTTGAGCGGATCGCGGTTATCGAAGATCGTCGGGTTGTTCTGCCGGAGGGTGTAGCCGAGAATGAAAATTTTCTTCGCATACTCGAGATCACCACGGGTCGAGTGAATGTACCGCTGCAGTAATGTTGGATGTATATTCTGGGGCAGATGGGGCTGTGTTGTAATCCAGTCCTTCAACCGTTCCGCTCCCTCTTCTAGATTAAACTCCTTTTCGATGCCCATCGTATAAATGGCGTCGGTACTGTACAACGATTGCAAGCAATCGAACTAAACGAAAAGCAAAGCCACACTGGTAAAGTTAAAAAGCTTTTAAAATAAAACACACAACACCCGGGGGAGGACAAATGTAAGAGTAACACGCGGCCAAACGCTCTGCCAAACCGTGTCCGACCGG ]
[-] EMBL BX626699 [ CTCCACCGTCGTTCATCGGGACATCCGGTTGGATCATGCGTAGATCGNCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTTATCGGGATCGCAATCTACCAAACGATAGTAAATAAACTTGTCCTCACAGCCTTCCACCGACGGTAGGGGCACCATGTCAATTGCTTTTAAAATATTCATCACATTGCTGTTGAGCGGATCGCGGTTGTCGAAGATCGTCGGATTGTTCTGCCGGAGGGTGTAGCCGAGAATGAAAATTTTCTTTGCATACTCGAGATCACCATGGGTTGAGTGAATGTACCGCTGCAGTAATGTTGGATGTATATTCTGGGGCAGATGGGGCTGTGTTGTAATCCAGTCCTTCAACCGTTCCGCTCCCTCTTCTAGATTAAACTCCTTTTCGATGCCCATCGTATAAATGGCGTCGGTACTGTACAACGGTTGCAAACAATCGAACTAAACGAAAAGCAATGCCACACTGGTAAAGATAAAAAGCTTTTAAAGGAAAACACACAACACCCGGGGGAGGACAAATGTAAGAGTAACACGCGGCCAAACGCTCTGCCAAACCGTGTCCGACTGTGATCANGTCCC]
consensusID : consensus_6261#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 542 fasta sequence
[TTGCTGTTGAACCAATCCTCTTTATGCTTAATGATTGACTGCTCACCACCGTACTCGTCGGTAGGCGCCTTGGCCAGGTGCGCAATAAATCGTTTCCGATTGGGGAGATGGAAGNTGTAGCATTTCGGCCACACGTTTCTTCATGAACGGTTTCACCAGGCACATGACGCGATCCAGAAAAGGCTGTACAGTTGATCACATGGATGCCCTTCAGACGCACCGGTTGTGCTTCCTGAGTTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCTTGGTCATGTGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACTGTCTCCACCGTCGTTCATCGGGACATCCGGTTGGATCATGCGTAGATCGGCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTGCAATCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAGAGATGAACACGGTGGTTAAAACCCATAGAGTATACAAANCATTCCTTTGCGTCCAACTCTCTCACCTATCGGTTAAACCTGGGGCG]
[-] EMBL AL694277 [TTGCTGTTGAACCAATCCTCTTTATGCTTAATGATTGACTGCTCACCACCGTACTCGTCGGTAGGCGCCTTGGCCAGGTGCGCAATAAATCGTTTCCGATTGGGGAGATGGAAGNTGTAGCATTTCGGCCACACGTTTCTTCATGAACGGTTTCACCAGGCACATGACGCGATCCAGAAAAGGCTGTACAGTTGATCACATGGATGCCCTTCAGACGCACCGGTTGTGCTTCCTGAGTTAGCGCATGTAGACGCGCAATGTCGACAGTACGACCTTGGTCATGTGCGAAGCGTGAAGCCATTCATGTCGAAGATCGGCACTGTCTCCACCGTCGTTCATCGGGACATCCGGTTGGATCATGCGTAGATCGGCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTGCAATCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAGAGATGAACACGGTGGTTAAAACCCATAGAGTATACAAANCATTCCTTTGCGTCCAACTCTCTCACCTATCGGTTAAACCTGGGGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6261#0 CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTTTTACAAAATCTCAATTTATTTAA 60
consensus_6261#2 ------------------------------------------------------------
consensus_6261#1 -----------------------------------------------GTAGCGCATGTAG 13
consensus_6261#0 TTATAGGCCCTTACTTTCCCCCGGTTGGGGGGGACTCATATAGTATATCACCCTTCTTTG 120
consensus_6261#2 ------------------------------------------------------------
consensus_6261#1 --ACGCGCAATGTCGACAGTACGACCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGT 71
consensus_6261#0 TAAAAGGTTTCTAGTATAAAACTAAGTTAATGTACATATACAATACAAATAACACATTGT 180
consensus_6261#2 ------------------------------------------------------------
consensus_6261#1 CGAAGATCGGCACGTCTCCACCGTCGTTCATCGGGACATCCGGT-TGGATCATGC---GT 127
consensus_6261#0 AAATAAAATGCAACAATGCAGGGCACTGCGGTTTAATCAATTTCCAGTTTCCGTAGCGTG 240
consensus_6261#2 ------------------------------------------------------------
consensus_6261#1 AGATCGGCAATAATGAAAAACGTCTTAATGACATCGTTAAAATCAAACTTAT-CGGGATC 186
consensus_6261#0 CCAAAGAGATCATTGCCATTACTTCGTCGCGACTCATCGATCTTCCAGCGCGTACCATCG 300
consensus_6261#2 ------------------------------------------------------------
consensus_6261#1 ACAATCTACCAAACGATAGTAAATAAACTTGTCCTCACAGCCTTCCA-------CCGACG 239
consensus_6261#0 GTAATGGAATCGCGTTGCAATTTAATTCTGTTGAACCAATCCTCTTTATGCTTAATGATT 360
consensus_6261#2 ------------------------TTGCTGTTGAACCAATCCTCTTTATGCTTAATGATT 36
consensus_6261#1 GTAGGGGCACCATGTCA------ATTGCTTTTAAAATATTCATCACATTGCT-GTTGAGC 292
* ** ** ** * ** ** **** ***
consensus_6261#0 GACTGCTCACCACCGTAC-TCGTCGGGTAGGGCGGCCTTGGGCAGGTGCGCA-TAAATCG 418
consensus_6261#2 GACTGCTCACCACCGTAC-TCGTCGG-TAGG--CGCCTTGGCCAGGTGCGCAATAAATCG 92
consensus_6261#1 GGATCGCGGTTATCGAAGATCGTCGGGTTGTTCTGCCGGAGGGTGTAGCCGA--GAATGA 350
* * * ** * ******* * * *** * * ** * ***
consensus_6261#0 TTTCCGAGTTGGGGAGATGGAAGT-GTAACATTTCGGCCACACGTTTCTTCATGAACGGT 477
consensus_6261#2 TTTCCGA-TTGGGGAGATGGAAGNTGTAGCATTTCGGCCACACGTTTCTTCATGAACGGT 151
consensus_6261#1 AAATTTTCTTCGCATACTCGAGATCACCACGGGTCGAGTGAATGTACCGCTG----CAGT 406
** * * ** * *** * ** * * **
consensus_6261#0 TTCACCAGGCACATGACGCGATCCAGAAAAGGC-GTACAGTTGATCACATGGATGGCCTT 536
consensus_6261#2 TTCACCAGGCACATGACGCGATCCAGAAAAGGCTGTACAGTTGATCACATGGATGCCCTT 211
consensus_6261#1 AATGTTGGATGTATATTCTGGGGCAGATGGGGCTGTGTTGTAATCCA-------GTCCTT 459
* ** * **** *** ** ** ** * ****
consensus_6261#0 CAGACGCACCGGGTGTGCTTCCTGAGTGTAGCGCATGTAGACGCGCAATGTCGACAGTAC 596
consensus_6261#2 CAGACGCACCGGTTGTGCTTCCTGAGT-TAGCGCATGTAGACGCGCAATGTCGACAGTAC 270
consensus_6261#1 CAACCGTTCCGCTCCCTCTTCTAGATTAAACTCCTTTTCGATGCCCATCGTATAAATGGC 519
** ** *** **** ** * * * * * ** ** ** ** * * *
consensus_6261#0 GACCCTTGGTCATGTGGCGAAGCGTGAAGCCATTCATGTCGAA-GATCGGCAC-GTCTCC 654
consensus_6261#2 GACC-TTGGTCATGTG-CGAAGCGTGAAGCCATTCATGTCGAA-GATCGGCACTGTCTCC 327
consensus_6261#1 G----TCGGTACTGTA-CAACGATTGCAAGCAATCGAACTAAACGAAAAGCAA-AGCCAC 573
* * *** *** * * * ** * ** ** ** ** *** * *
consensus_6261#0 ACCGTCGTT-ATCGGGACATCCAGCCTCGGGNCAATTCTTG------------------- 694
consensus_6261#2 ACCGTCGTTCATCGGGACATCCGG--TTGGATCATGCGTAGATCGGCAATAATGAAAAAC 385
consensus_6261#1 ACTGGTAAAGTTAAAAAGCTTTTAAAATAAAACACACAACACCCGGGGGAGGACAAATGT 633
** * * * * **
consensus_6261#0 ------------------------------------------------------------
consensus_6261#2 GTCTTAATGACATCGTTAAAATCAAACTGCAATCAAGAGAGAGAGAGAGAGAGAGAGAGA 445
consensus_6261#1 AAGAGTAACACGCGGCCAAACGCTCTGCCAAACCGTGTCCGACCGGGATCANGTCCC--- 690
consensus_6261#0 ------------------------------------------------------------
consensus_6261#2 GAGAAGGAAAGAGATGAACACGGTGGTTAAAACCCATAGAGTATACAAANCATTCCTTTG 505
consensus_6261#1 ------------------------------------------------------------
consensus_6261#0 -------------------------------------
consensus_6261#2 CGTCCAACTCTCTCACCTATCGGTTAAACCTGGGGCG 542
consensus_6261#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||