cluster # 6515

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Anopheles gambiae
cluster # 6515 cluster # 6515 Sequences # 5 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6515#0 length = 692 sequences # 2

consensus_6515#1 length = 629 sequences # 2
consensus_6515#2 length = 496 sequences # 1

consensusID : consensus_6515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 692
fasta sequence

                              [CCGGCCGGCCAGTTCTGCTATTATACTTATTCGTGGCTGGTGGGCAACTTCAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTTTGCAGCTTACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTACGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGGCGTGTTGTTGTTTCGACGGCCAACCTTTACGAGAACGATTGGTACAATCGCACACAGGGGCTTTGGATCAGCCCCCGTTTGCCAGCAGTGCCGGGAAGGTT]

[+] EMBL BM598678             [CCGGCCGGCCAGTTCTGCTATTATACTTATTCGTGGCTGGTGGGCAACTTCAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTTTGCAGCTTACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTACGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGGCGTGTTGTTGTTTCGACGGCCAACCTTTACGAGAACGATTGGTACAATCGCACACAG                                            ]
[+] EMBL BM599328             [                                            ccgCTTCAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTTTGCAGCTTACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTACGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGAT GCGTGTTGTTGTTTCGACGGCCAACCTTTACGAGAACGATTGGTACAATCGCACACAGGGGCTTTGGATCAGCCCCCGTTTGCCAGCAGTGCCGGGAAGGTT]




>consensus_6515#0
CCGGCCGGCCAGTTCTGCTATTATACTTATTCGTGGCTGGTGGGCAACTTCAGTTTAGGT
TTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGG
ATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTG
AGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGC
TTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACAC
ACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGG
AATGCTCTTTGCAGCTTACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAG
ATGCAGGCTACGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAA
CGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCG
GATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGGCGTGTTGTT
GTTTCGACGGCCAACCTTTACGAGAACGATTGGTACAATCGCACACAGGGGCTTTGGATC
AGCCCCCGTTTGCCAGCAGTGCCGGGAAGGTT

consensusID : consensus_6515#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 629
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCTTATTCGTGGCTGGTGGGCAACTTTAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGTCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTACCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTAGGAGAGCTGGAATGCTCTTTGCAGCTCACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTATGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGCGTGTTGTTGTTTCGACGGCCAACCTTTACGAGAACG]

[+] EMBL BM656970             [CCGCCCACGCGTCCGCCCACGCGTCCGCTTATTCGTGGCTGGTGGGCAACTTTAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGTCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTACCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTAGGAGAGCTGGAATGCTCTTTGCAGCTCACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTATGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGCGTGTTGTTGTTTCGACGGCCAACCTTTACGAGAACG]
[+] EMBL BX620270             [                                                                                                AATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTACCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTAGGAGAGCTGGAATGCTCTTTGCAGCTCACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTCAGATGCAGGCTATGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGA                                               ]




>consensus_6515#1
CCGCCCACGCGTCCGCCCACGCGTCCGCTTATTCGTGGCTGGTGGGCAACTTTAGTTTAG
GTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGTCACCTCA
GGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAG
TGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAA
GCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTACCGTCACGGATTCGCAGCCTAC
ACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTAGGAGAGCT
GGAATGCTCTTTGCAGCTCACTTATATGATAGATATAAACTGGTTGCTGGAGCAGTACTC
AGATGCAGGCTATGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGA
AACGATATCGGACAAACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGGGGTT
CGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGCGTGTTGT
TGTTTCGACGGCCAACCTTTACGAGAACG

consensusID : consensus_6515#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence

                              [GCCAAGAATCGGCACGATGGATCGTGGCTGGTGGGCAACTTCAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTTTGCAGGCTTACTTATATGATAGATATAAACTGGGTTGCTGGAGCAGTACTCAGATGCAGGCTACGAGCAAAANCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAGACAGGCTAA]

[+] EMBL BX468404             [GCCAAGAATCGGCACGATGGATCGTGGCTGGTGGGCAACTTCAGTTTAGGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTTTGCAGGCTTACTTATATGATAGATATAAACTGGGTTGCTGGAGCAGTACTCAGATGCAGGCTACGAGCAAAANCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATCGGACAAGACAGGCTAA]




>consensus_6515#2
GCCAAGAATCGGCACGATGGATCGTGGCTGGTGGGCAACTTCAGTTTAGGTTTAACAGTG
CATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTCAGGATACAACTA
CTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATAGTGAGATCGTTG
AGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATAAGCTTGCTGCTT
CTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTACACACACGGATC
CACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGCTGGAATGCTCTT
TGCAGGCTTACTTATATGATAGATATAAACTGGGTTGCTGGAGCAGTACTCAGATGCAGG
CTACGAGCAAAANCCACTGCTTATACTGTACGGCGATGAGTCTGAGCTGGAAACGATATC
GGACAAGACAGGCTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6515#0      CCGGCCGGCCAGTTCTGCTAT---TATACTTATTCGTGGCTGGTGGGCAACTTCAGTTTA 57
consensus_6515#1      -CCGCCCACGCGTCCGCCCACGCGTCCGCTTATTCGTGGCTGGTGGGCAACTTTAGTTTA 59
consensus_6515#2      ------------GCCAAGAATCGGCACGATGGATCGTGGCTGGTGGGCAACTTCAGTTTA 48
                                    *    *         *   ******************** ******

consensus_6515#0      GGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTC 117
consensus_6515#1      GGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGTCACCTC 119
consensus_6515#2      GGTTTAACAGTGCATTTTTAAATATCCGTGTTATACCAATTTGAACCATGCAGGCACCTC 108
                      ***************************************************** ******

consensus_6515#0      AGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATA 177
consensus_6515#1      AGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATA 179
consensus_6515#2      AGGATACAACTACTCCGGATGTCCTACCGACCTGCCCAACGGAAGATGAAAGTGTTAATA 168
                      ************************************************************

consensus_6515#0      GTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATA 237
consensus_6515#1      GTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATA 239
consensus_6515#2      GTGAGATCGTTGAGAACCCTCCCCCATTGTTCGTAGCCCCGCGGGGACGTATGGCCGATA 228
                      ************************************************************

consensus_6515#0      AGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTA 297
consensus_6515#1      AGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTACCGTCACGGATTCGCAGCCTA 299
consensus_6515#2      AGCTTGCTGCTTCTGCCCCGTACAACTTTTTCTTATCTGCCGTCACGGATTCGCAGCCTA 288
                      ************************************** *********************

consensus_6515#0      CACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGC 357
consensus_6515#1      CACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTAGGAGAGC 359
consensus_6515#2      CACACACGGATCCACTATCGGTTACCTTTCAGGAGCTGCTGGATCCTAGCCTGGGAGAGC 348
                      **************************************************** *******

consensus_6515#0      TGGAATGCTCTTTGCAG-CTTACTTATATGATAGATATAAACTGG-TTGCTGGAGCAGTA 415
consensus_6515#1      TGGAATGCTCTTTGCAG-CTCACTTATATGATAGATATAAACTGG-TTGCTGGAGCAGTA 417
consensus_6515#2      TGGAATGCTCTTTGCAGGCTTACTTATATGATAGATATAAACTGGGTTGCTGGAGCAGTA 408
                      ***************** ** ************************ **************

consensus_6515#0      CTCAGATGCAGGCTACGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCT 475
consensus_6515#1      CTCAGATGCAGGCTATGAGCAACACCCACTGCTTATACTGTACGGCGATGAGTCTGAGCT 477
consensus_6515#2      CTCAGATGCAGGCTACGAGCAAAANCCACTGCTTATACTGTACGGCGATGAGTCTGAGCT 468
                      *************** ****** * ***********************************

consensus_6515#0      GGAAACGATATCGGACAA-ACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGG 534
consensus_6515#1      GGAAACGATATCGGACAA-ACAGCCTAACGTTACTGCTATCAAAATTAAAACTAAGACGG 536
consensus_6515#2      GGAAACGATATCGGACAAGACAGGCTAA-------------------------------- 496
                      ****************** **** ****                                

consensus_6515#0      GGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATGGCGT 594
consensus_6515#1      GGTTCGGATTGCACCATACAAAGATGGGTCTGTACGGATATTGTGACGGATCGATG-CGT 595
consensus_6515#2      ------------------------------------------------------------
                                                                                  

consensus_6515#0      GTTGTTGTTTCGACGGCCAACCTTTACGAGAACGATTGGTACAATCGCACACAGGGGCTT 654
consensus_6515#1      GTTGTTGTTTCGACGGCCAACCTTTACGAGAACG-------------------------- 629
consensus_6515#2      ------------------------------------------------------------
                                                                                  

consensus_6515#0      TGGATCAGCCCCCGTTTGCCAGCAGTGCCGGGAAGGTT 692
consensus_6515#1      --------------------------------------
consensus_6515#2      --------------------------------------