Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6516 cluster # 6516       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6516#0 length = 968 sequences # 5  
consensusID : consensus_6516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 968
fasta sequence 
                              [ATACCGACCGGCATTGGTACGCTGATTGAGATGTGGAAGGCGAAGAAAATCCTCAAGCTCGACATTAGCCTGCGTCACGGTGTACGGTTCCGTGCGAACGATGCCGCCGGTATCGCGGATGCTTCCATTCAAACGCAGGAAAACAATACACTCGAGCTGGACAAGGAGGCGATGCAGTATCTAAGCTACGTGCTGTACCCACTGTGCGTTGGTGGAGCCATTTATTCACTGCTCTATCTTCCCCACAAGAGCTGGTACTCGTGGACAATCAGCTCACTGGCAAACGGGGTGTATGCGTTCGGGTTTCTGTTTATGCTGCCACAGCTGTTTATCAACTACAAGCTGAAATCGGTCGCCGCCCTACCGTGGCGTGTGTTCATGTACAAAGCGTTCAATACGTTCATCGACGATGTGTTTGCCTTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTTCTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCA---------AACCGAT---------ACGACCAGCGACACTGAGCAGAAGTCAAAGAAGCTCGACGGGAAGGAAAATAAGAAAGACAATTAAAACGTGCTAATACAGTTAACAGGCAGCACAACTAAACTGTAAGAATACCTTTGCCGATTTCAAAATGCAATATGAGGCAAGCAAGCGCTAACGCACACCCACAAAAAAAGAACGTTTTATTGCATTTAAGATTCGAAAAGCATTATTCAAGTTGAAGAAGTTAAACAAATTATAGTAGTACAACTGTTAGAACGTGCATCGTTGCGAGTCATTCAGTTCCATCCATTTTTATGTTTTAGAATTAGTAAATGAAACTGTACTGTATACTTATTTTTTCACAACATATAACGAAATGCTTTGTTGGAACCGTTTGTAGTGAATCGTATCGT]

[+] EMBL BX622310             [ATACCGACCGGCATTGGTACGCTGATTGAGATGTGGAAGGCGAAGAAAATCCTCAAGCTCGACATTAGCCTGCGTCACGGTGTACGGTTCCGTGCGAACGATGCCGCCGGTATCGCGGATGCTTCCATTCAAACGCAGGAAAACAATACACTCGAGCTGGACAAGGAGGCGATGCAGTATCTAAGCTACGTGCTGTACCCACTGTGCGTTGGTGGAGCCATTTATTCACTGCTCTATCTTCCCCACAAGAGCTGGTACTCGTGGACAATCAGCTCACTGGCAAACGGGGTGTATGCGTTCGGGTTTCTGTTTATGCTGCCACAGCTGTTTATCAACTACAAGCTGAAATCGGTCGCCGCCCTACCGTGGCGTGTGTTCATGTACAAAGCGTTCAATACGTTCATCGACGATGTGTTTGCCTTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTTCTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCA         AACCGAT         ACAACCgatacgacc                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM602164             [                                                                                                                                       ccGGAAAACAATACACTCGAGCTGGACAAGGAGGCGATGCAGTATCTAAGCTACGTGCTGTACCCACTGTGCGTTGGTGGAGCCATTTATTCACTGCTCTATCTTCCCCACAAAAGCTGGTACTCGTGGACAATCAGCTCACTGGCAAACGGGGTGTATGCGTTCGGGTTTCTGTTTATGCTGCCACAGCTGTTTATCAACTACAAGCTGAAATCGGTCGCCGCCCTACCGTGGCGTGTGTTCATGTACAAAGCGTTCAACACGTTCATCGACGATGTGTTTGCCTTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTTCTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCA         AACCGAT         ACGACCAGCGACACTGAGCAGAAGTCAAAGAAGCTCGACGGGAAGGAAAATAAGAAAGACAATTAAAACGTGCTAATACAGTTAACAGGCAGCACAACTAAACTGTAAGAATACCTTTGCCGATTTCAAAATGCAATATGAGGCAAGCAAGCGCTAACGCACACCCACAAAAAAAGAACGTTTTATTGCATTTAAGATTCGAAAAGCATTATTCA                                                                                                                                                                                    ]
[+] EMBL BX608981             [                                                                                                                                                                                                                                                                                                              GTTTCTGTTTATGCTGCCACAGCTGTTTATCAACTACAAGCTGAAATCGGTCGCCGCCCTACCGTGGCGTGTGTTCATGTACAAAGCGTTCAATACGTTCATCGACGATGTGTTTGCCTTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTTCTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCAAACCGATACAACCGAT         ACGACCAGCGACACTGAGCAGAAGTCAAAGAAGCTCGATGGGAAGGAAAATAAGAAAGACAATTAAAACATGCTAATACAGTTAACAGGCAGCACAACTAAACTGTAAGAATACCTTTGCCTATTTCAAAATGCAATATGAGGCAAGCATGCGCTAACGCACACCCACAAAAAAAGAACGTTTTATTGCATTTAAGATTCGAAAAGCATTATTCAAGTTGAAGAAGTTAAACAAATTATAGTAGTACAACTG                                                                                                                                               ]
[+] EMBL BM626659             [                                                                                                                                                                                                                                                                                                                                                                          ccgGTGGCGTGTGTTCATGTACAAAGCGTTCAACACGTTCATCGACGATGTGTTTGCCTTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTTCTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCA         AACCGAT         ACGACCAGCGACACTGAGCAGAAGTCAAAGAAGCTCGACGGGAAGGAAAATAAGAAAGACAATTAAAACGTGCTAATACAGTTAACAGGCAGCACAACTAAACTGTAAGAATACCTTTGCCGATTTCAAAATGCAATATGAGGCAAGCAAGCGCTAACGCACACCCACAAAAAAAGAACGTTTTATTGCATTTAAGATTCGAAAAGCATTATTCAAGTTGAAGAAGTTAAACAAATTATAGTAGTACAACTGTTAGAACGTGCATCGTTGCGAGTCATTCAGTTCCATCCATTTTTATGTTTTAGAATTAGTAAATGAAACTGTACTGTATACTTATTTTTTCACAACATATAACGAAATGCTTTGTTGGAACCGTTTGTAGTGAATCGTATCGT]
[+] EMBL BX612506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGACGAGCGTGCACTGATGGGAAAAGATCA         AACCGATACAACCGAAACGACCAGCGACACTGAGCAGAAGTCAAAGAAGCTCGATGGGAAGGAAAATAAGAAAGACAATTAAAACATGCTAATACAGTTAACAGGCAGCACAACTAAACTGTAAGAATACCTTTGCCTATTTCAAAATGCAATATGAG                                                                                                                                                                                                                                                             ]




>consensus_6516#0
ATACCGACCGGCATTGGTACGCTGATTGAGATGTGGAAGGCGAAGAAAATCCTCAAGCTC
GACATTAGCCTGCGTCACGGTGTACGGTTCCGTGCGAACGATGCCGCCGGTATCGCGGAT
GCTTCCATTCAAACGCAGGAAAACAATACACTCGAGCTGGACAAGGAGGCGATGCAGTAT
CTAAGCTACGTGCTGTACCCACTGTGCGTTGGTGGAGCCATTTATTCACTGCTCTATCTT
CCCCACAAGAGCTGGTACTCGTGGACAATCAGCTCACTGGCAAACGGGGTGTATGCGTTC
GGGTTTCTGTTTATGCTGCCACAGCTGTTTATCAACTACAAGCTGAAATCGGTCGCCGCC
CTACCGTGGCGTGTGTTCATGTACAAAGCGTTCAATACGTTCATCGACGATGTGTTTGCC
TTCATCATTACGATGCCCACTGCCCACCGGTTCGCTTGCTTCCGGGACGATATCGTGTTT
CTCGTGTACTTGTACCAACGCTGGTTGTATCCGGTCGACAAATCGCGCATTGACGAGGAC
GAGCGTGCACTGATGGGAAAAGATCAAACCGATACGACCAGCGACACTGAGCAGAAGTCA
AAGAAGCTCGACGGGAAGGAAAATAAGAAAGACAATTAAAACGTGCTAATACAGTTAACA
GGCAGCACAACTAAACTGTAAGAATACCTTTGCCGATTTCAAAATGCAATATGAGGCAAG
CAAGCGCTAACGCACACCCACAAAAAAAGAACGTTTTATTGCATTTAAGATTCGAAAAGC
ATTATTCAAGTTGAAGAAGTTAAACAAATTATAGTAGTACAACTGTTAGAACGTGCATCG
TTGCGAGTCATTCAGTTCCATCCATTTTTATGTTTTAGAATTAGTAAATGAAACTGTACT
GTATACTTATTTTTTCACAACATATAACGAAATGCTTTGTTGGAACCGTTTGTAGTGAAT
CGTATCGT

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)