Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6549 cluster # 6549       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6549#0 length = 1009 sequences # 5  
consensusID : consensus_6549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1009
fasta sequence 
                              [GGAATTTCTTGGGCGCCTCCCGAGAAATTGCCTCCTTGTCCAAGCAATTCAACCACCAGTGGCAAACATCAGTGATTAAGTCCTGCATCGACGATGGCATCCAGTTCAAGTTCATCCCACCTCGCTCACCCAACTTTGGAGGTCTTTGGGAGGCGGCAGTGAAGTCTTTCAAAACACACTTCAAGCCAACCGTTGGGAACGCCATCCTCACGAGCGACGAACTCAACACGCTACTGATCCAGATTGAAGGATGCCTCAACTCTAGACCACTTACACCACTCTCCAATGATCCATCTGATCTGGAAGTGCTGACTCCAGGTCACTTCCTCATTCATCGCCCCATCGTATCCCTGGCCGAACCATCGCTGGAAAAGCTGCCGTTCAACCGTCTCGATCGCTGGCAAAAGGTGCAGGAGTTTGTCCGTCGGCTATGGAAACGTTGGTCAACAGACTACTTGTCCGGACTACAGCAGAGAACCAAGTGGACCAAGCAGAAGGACAACGTGAAGCTGGATACCATGGTGCTCCTGAAGGAGGACGGTCTACCTCCATCGAAATGGTGTCTTGGCCGCGTCACGCAGATCATCAAGGGAGCTGACGACAACATCCGAGTGGTCATCGTCAAGACGAAAGATGGAGACTTCAAGCGTTCCATCTCTAAAATCTGCGTTCTTCCCACCGACGAGCCATCCAGTTCATCCTAGTTGAATTANATAATTCAACGCGGGGGAGTATGTTACGGCAAGCGTAATGGTAACGCGTCACCCTTAGTACGCCTAGCGTAAGGTAAAGGGCGCTTTCAAGAAATTTACCTACGTGTAAATTTTACTTAATCATAATTCTATTACGCAGTGCAAATTGCTGTAGATCGGTATCGTGCAGCTCGAATTCCCGCAAGTGCAGCTCGAATTACCGCAAGTGCAGCTCGAATTCCCGAATTCTGCCGTATATAAGCGAGTGTTTTTCCTGAATAAATTTAGTCAAGTTCCAGAGTTCAAATCAACAAAAA]

[+] EMBL BX625386             [GGAATTTCTTGGGCGCCTCCCGAGAAATTGCCTCCTTGTCCAAGCAATTCAACCACCAGTGGCAAACATCAGTGATTAAGTCCTGCATCGACGATGGCATCCAGTTCAAGTTCATCCCACCTCGCTCACCCAACTTTGGAGGTCTTTGGGAGGCGGCAGTGAAGTCTTTCAAAACACACTTCAAGCCAACCGTTGGGAACGCCATCCTCACGAGCGACGAACTCAACACGCTACTGATCCAGATTGAAGGATGCCTCAACTCTAGACCACTTACACCACTCTCCAATGATCCATCTGATCTGGAAGTGCTGACTCCAGGTCACTTCCTCATTCATCGCCCCATCGTATCCCTGGCCGAACCATCGCTGGAAAAGCTGCCGTTCAACCGTCTCGATCGCTGGCAAAAGGTGCAGGAGTTTGTCCGTCGGCTATGGAAACGTTGGTCAACAGACTACTTGTCCGGACTACAGCAGAGAACCAAGTGGACCAAGCAGAAGGACAACGTGAAGCTGGATACCATGGTGCTCCTGAAGGAGGACGGTCTACCTCCATCGAAATGGTGTCTTGGCCGCGTCACGCAGATCATCAAGGGAGCTGACGACAACATCCGAGTGGTCATCGTCAAGACGAAAGATGGAGACTTCAAGCGTTCCATCTCTAAAATCTGCGTTCTTCCCACCGACGAGCCATCCAGTTCATCCTAGTTGAATTANATAATTCAACGCGGGGGAGTATGTTACNGCAAGCGTAATGGTAACGCGTCACCCTTAGTACcc                                                                                                                                                                                                                                         ]
[+] EMBL BX620112             [                              CCTCCNTGTCCAAGCAATTCAACCACCAGTGGCAAACATCAGTGATTAAGTCCTGCATCGACGATGGCATCCAGTTCAAGTTCATCCCACCTCGCTCACCTAACTTTGGAGGTCTTTGGGAGGCGGCAGTGAAGTCTTTCAAAACACACTTCAAGCCAACCGTTGGGAACGCCATCCTCTCGAGCGACGAACTCAACACGCTACTGATCCAGATTGAAGGATGCCTCAACTCTAGACCACTTACACCACTCTCCAATGACCCATCTGATCTGGAAGTGCTGACTCCAGGTCACTTCCTCATTCATCGCCCCATCGTATCCCTGGCCGAACCATCGCTGGAAAAGCTGCCGTTCAACCGTCTCGATCGCTGGCAAAAGGTGCAGGAGTTTGTCCGTCGGCTATGGAAACGTTGGTCAACAGACTACTTGTCCGGACTACAGCAGAGAACCAAGTGGACCAAGCAGAAGGACAACGTGAAGCTGGATACCATGGTGCTGCTGAAGGAGGACGGGCTACCTCCATCAAAATGGTGTCTTGGCCGCGTCACGCAGATCATCAAGGGAGCTGACGACAACATCCGAGTGGTCATCGTCAAGACGAAAGATGGAGACTTCAAGCGTTCCATCTCTAAAATCTGCGTTCTTNCCACCGACGAGCCATCCAGTTCATCCTAGTTG                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX614696             [                                                                               GTCCTGCATCGACGATGGCATCCAGTTCAAGTTCATCCCACCTCGCTCACCCAACTTTGGAGGTC TTGGGAGGCGGCAGTGAAGTCTTTCAAAACACACTTCAAGCCAACCGTTGGGAACGCCATCCTCACTAGCGACGAACTCAACACGCTACTGATCCAGATTGAAGGATGCCTCAACTCTAGACCACTTACACCACTCTCCAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA284686            [                                                                                                                                                                                                                                                                                                                                                                                                                    AAGGTGCAGGAGTTTGTCCGTCGGCTATGGAAACGTTGGTCAACAGACTACTTGTCCGGACTACAGCAGAGAACCAAGTGGACCAAGCAGAAGGACAACGTGAAGCTGGATACCATGGTGCTCCTGAAGGAGGACGGTCTACCTCCATCGAAATGGTGTCTTGGCCGCGTCACGCAGATCATCAAGGGAGCTGACGACAACATCCGAGTGGTCATCGTCAAGACGAAAGATGGAGACTTCAAGCGTTCCATCTCTAAAATCTGCGTTCTTCCCACCGACGAGCCATCCAGTTCATCCTAGTTGAATTAGATAATTCAACGCGGGGGAGTATGTTACGGCAAGCGTAATGGTAACGCGTCACCCTTAGTACGCCTAGCGTAAGGTAAAGGGCGCTTTCAAGAAATTTACCTACG                                                                                                                                                                                                ]
[-] EMBL AGA283393            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCAACGCGGGGGAGTATGTTACGGCAAGCGTAATGGTAACGCGTCACCCTTAGTACGCCTAGCGTAAGGTAGAGGGCGCTTTCAAGAAATTTACCTACGTGTAAATTTTACTTAATCATAATTCTATTACGCAGTGCAAATTGCTGTAGATCGGTATCGTGCAGCTCGAATTCCCGCAAGTGCAGCTCGAATTACCGCAAGTGCAGCTCGAATTCCCGAATTCTGCCGTATATAAGCGAGTGTTTTTCCTGAATAAATTTAGTCAAGTTCCAGAGTTCAAATCAACAAAAA]




>consensus_6549#0
GGAATTTCTTGGGCGCCTCCCGAGAAATTGCCTCCTTGTCCAAGCAATTCAACCACCAGT
GGCAAACATCAGTGATTAAGTCCTGCATCGACGATGGCATCCAGTTCAAGTTCATCCCAC
CTCGCTCACCCAACTTTGGAGGTCTTTGGGAGGCGGCAGTGAAGTCTTTCAAAACACACT
TCAAGCCAACCGTTGGGAACGCCATCCTCACGAGCGACGAACTCAACACGCTACTGATCC
AGATTGAAGGATGCCTCAACTCTAGACCACTTACACCACTCTCCAATGATCCATCTGATC
TGGAAGTGCTGACTCCAGGTCACTTCCTCATTCATCGCCCCATCGTATCCCTGGCCGAAC
CATCGCTGGAAAAGCTGCCGTTCAACCGTCTCGATCGCTGGCAAAAGGTGCAGGAGTTTG
TCCGTCGGCTATGGAAACGTTGGTCAACAGACTACTTGTCCGGACTACAGCAGAGAACCA
AGTGGACCAAGCAGAAGGACAACGTGAAGCTGGATACCATGGTGCTCCTGAAGGAGGACG
GTCTACCTCCATCGAAATGGTGTCTTGGCCGCGTCACGCAGATCATCAAGGGAGCTGACG
ACAACATCCGAGTGGTCATCGTCAAGACGAAAGATGGAGACTTCAAGCGTTCCATCTCTA
AAATCTGCGTTCTTCCCACCGACGAGCCATCCAGTTCATCCTAGTTGAATTANATAATTC
AACGCGGGGGAGTATGTTACGGCAAGCGTAATGGTAACGCGTCACCCTTAGTACGCCTAG
CGTAAGGTAAAGGGCGCTTTCAAGAAATTTACCTACGTGTAAATTTTACTTAATCATAAT
TCTATTACGCAGTGCAAATTGCTGTAGATCGGTATCGTGCAGCTCGAATTCCCGCAAGTG
CAGCTCGAATTACCGCAAGTGCAGCTCGAATTCCCGAATTCTGCCGTATATAAGCGAGTG
TTTTTCCTGAATAAATTTAGTCAAGTTCCAGAGTTCAAATCAACAAAAA

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)