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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6608#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1362 fasta sequence
[CCGGGTGAATGTGTCTTTTTCATTCGGCTAGTTTACTTCTGGCAGAGACACAGAATGGACACAAAGCGATTGAATCTGTCCGACAGTGAGCTGCGACAAATTGTGAACGATCACTTCACAACATGTGACTCAGCCGACCAAGCGTACCGTATC-GTACAAACTGCCCTGGAACCGTTCAGTCCCTGCCCGGAGGGGTTTCTAGCGGATCACTATGCGCTGAAAGTTACGATAGAAAGAAATGGCCAAACGGAGCTGCTTAGCTTCTTCGTCAAGTGTCTACCCACTGAGAATCCGGTGCTAAGAAGCTACCTCGAGGAGATTGGTAGCTTCCGCAAGGAAAGCAGTGTCTTGCAGCGGATAGTGGGATCGATTCAGCGCCACTGCCCATGGCGTACCGTTGCCCCACGGGTGCACTTGGCCGTAGAGGAACAACTGCTCGTCATGAACAATCTTAAGTCCGACGGGTATTCGGTCGTTAAACGCGAAGGTGGTTTGTTGGAGGTGGTATT-CGTGCATCAAGCGC-TAGAAACACTATCCAACCTGCATGCCTGTTCGTTCGTACTGGAACAGAAGCAGGGTAAGCGTTTGCCCGAGCTGTTTCCAGCCGTGCTCAATGAAAATGCTTGGGTGCAGACGTCTACCAGCACAAGAGTGAAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGGCACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTACACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCATGGTGATCTTTGGTGTAACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGACTATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACGACCAGTCGTCAATTGCGAGACGAGAATCTATCTGTGCTGTTAGACCATTATTACAAGTGTTTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACGTTTCTTCGGTGCTGCGAGCATTACAGACTCGCAGGGCTCATCCACTCGACGATTATCAGCGGTGAGGTGACTCTGCCGAGCAAGTTTTTGGAGGAAATATTCGGTGACCTGCAGAGTACGGCTAGCTTTATGCCGGACACGAAGGTGTGGATTTGTGTAAAGGCTTTCCAGGCAGACGAACGCTACCGGAAGCATCTGATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGAATGTAGCTGCGAAGAAAGTGTGTGACGTTTTCATTTATGCAAAAGTATTAAAT]
[+] EMBL BM650116 [CCGGGTGAATGTGTCTTTTTCATTCGGCTAGTTTACTTCTGGCAGAGACACAGAATGGACACAAAGCGATTGAATCTGTCCGACAGTGAGCTGCGACAAATTGTGAACGATCACTTCACAACATGTGACTCAGCCGACCAAGCGTACCGTATC GTACAAACTGCCCTGGAACCGTTCAGTCCCTGCCCGGAGGGGTTTCTAGCGGATCACTATGCGCTGAAAGTTACGATAGAAAGAAATGGCCAAACGGAGCTGCTTAGCTTCTTCGTCAAGTGTCTACCCACTGAGAATCCGGTGCTAAGAAGCTACCTCGAGGAGATTGGTAGCTTCCGCAAGGAAAGCAGTGTCTTGCAGCGGATAGTGGGATCGATTCAGCGCCACTGCCCATGGCGTACCGTTGCCCCACGGGTGCACTTGGCCGTAGAGGAACAACTGCTCGTCATGAACAATCTTAAGTCCGATGGGTATTCGGTCGTTAAACGCGAAGGTGGTTTGTTGGAGGTGGTATT CGTGCAGCAAGCGC TAGAAACACTAGCCAACCTGCATGCCTGTTCGTTCGTACTGGAACAGAAGCAGGGTAAGCGTTTGCCCGAGCTGTTTCCAGCCGTGCTCAATGAAAATGCTTGGGTGCAGACGTCTACCAGCACAAGAGTGAAGGATGTGGCCAATGGTATCAAGCTGTACACCGAGCTG ]
[+] EMBL AL695613 [ cccgaggttAATGGACACAAAGCGATTGAATCTGTCCGACAGTGAGCTGCGACAAATTGTGAACGATCACTTCACAACATGTGACTCAGCCGA CAAGCGTACCGTATCTGTACAAACTGGCCTGGAACCGTTCAGTCCCTGCCCGGAGGGGTTTCTAGCGGATCACTATGCGCTGAAAGTTACGATAGAAAGAAATGG CAAACGGAGCTGCTTAGCTTCTTCGTCAAGTGTCTACCCACTGAGAATCCGGTGCTAAGAAGCTA CTCGAGGAGATTGGTAGCTTCCGCAAGGAAAGCAGTGTCTTGCAGCGGATAGTGGGATCGATTCAGCGCCACTG CCATGGCGTA CGTTGCCCCACGGGTGCACTTGG CGTAGAGGAACAACTGGTCGTCATGAACAATCTTAAGTCCGACGGGTATTCGGTCGTTAAACGCGAAGGTGGTTTG TGGAGGTGGTATTCCGTGCATCAAGCGCGTAGAAACACTATTCAACt ]
[+] EMBL BX620517 [ CAAATTGTGAACGATCACTTCACAACATGTGACTCAGCCGACCAAGCGTACCGTATC GTACAAACTGCCCTGGAACCGTTCAGTCCCTGCCCGGAGGGGTTTCTAGCGGATCACTATGCGCTGAAAGTTACGATAGAAAGAAATGGCCAAACGGAGCTGCTTAGCTTCTTCGTCAAGTGTCTACCCACTGAGAATCCGGTGCTAAGAAGCTACCTCGAGGAGATTGGTAGCTTCCGCAAGGAAAGCAGTGTCTTGCAGCGGATAGTGGGATCGATTCAGCGCCACTGCCCATGGCGTACCGTTGCCCCACGGGTGCACTTGGCCGTAGAGGAACAACTGCTCGTCATGAACAATCTTAAGTCCGACGGGTATTCGGTCGTTAAACGCGAAGGTGGTTTGTTGGAGGTGGTATT CGTGCATCAAGCGC TAGAAACACTATCCAACCTGCATGCCTGTTCGTTCGTACTGGAACAGAAGCAGGGTAAGCGTTTGCCCGAGCTGTTTCCAACCGTGCTCAATGAAAATGCTTGGGTGCAGACGTCTACCAGCACAAGAGTGAAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGGCACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTACACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCATGGTGATCTTTGGTGTAACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGAT ]
[+] EMBL BX624110 [ GCTTGGGTGCAGACGTCTACCAGCACAAGAGTGAAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGGCACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTACACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCATGGTGATCTTTGGTGTAACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGACTATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACGACCAGTCGTCAATTGCGAGACGAGAATCTATCTGTGCTGTTAGACCATTATTACAAGTGTTTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACGTTTCTTCGGTGCTGCGAGCATTACAGACTCGCAGGGCTCATCCACTCGACGATTATCAGCGGTGAGGTGACTCTGCCGAGCAAGTTTTTGGAGGAAATATTCGGTGACCTGCAGAGTACGGCTAGCTTTATGCCGGACACGAAGGTGTGGATTTGTGTAAAGGCTTTCCAGGCAGACGAACGCTACCGGAAGCATCTGATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGAATGTAGCTGCGAAGAAAGTGTGTGACGTTTTCATTTATGCAAAAGTATTAAAT]
consensusID : consensus_6608#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[CCGCCCACGCGTCCGGAAGCATCTCATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGAATGTAGCTGTGAAACAAGAGTGAAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGGCACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTACACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCACGGTGATCTTTGGTGTAACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGACTATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACGACTAGTCGTCAATTGCGAGACGAGAATCTAACTGCACTGTTAGACCATTATTACAAGTGTTTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACGTTTCTTCGGTGCTGCGAGCATT]
[+] EMBL BM628049 [CCGCCCACGCGTCCGGAAGCATCTCATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGAATGTAGCTGTGAAACAAGAGTGAAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGGCACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTACACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCACGGTGATCTTTGGTGTAACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGACTATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACGACTAGTCGTCAATTGCGAGACGAGAATCTAACTGCACTGTTAGACCATTATTACAAGTGTTTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACGTTTCTTCGGTGCTGCGAGCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6608#0 CCGGGTGAATGTGTCTTTTTCATTCGGCTAGTTTACTTCTGGCAGAGACACAGAATGGAC 60
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 ACAAAGCGATTGAATCTGTCCGACAGTGAGCTGCGACAAATTGTGAACGATCACTTCACA 120
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 ACATGTGACTCAGCCGACCAAGCGTACCGTATCGTACAAACTGCCCTGGAACCGTTCAGT 180
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 CCCTGCCCGGAGGGGTTTCTAGCGGATCACTATGCGCTGAAAGTTACGATAGAAAGAAAT 240
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 GGCCAAACGGAGCTGCTTAGCTTCTTCGTCAAGTGTCTACCCACTGAGAATCCGGTGCTA 300
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 AGAAGCTACCTCGAGGAGATTGGTAGCTTCCGCAAGGAAAGCAGTGTCTTGCAGCGGATA 360
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 GTGGGATCGATTCAGCGCCACTGCCCATGGCGTACCGTTGCCCCACGGGTGCACTTGGCC 420
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 GTAGAGGAACAACTGCTCGTCATGAACAATCTTAAGTCCGACGGGTATTCGGTCGTTAAA 480
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 CGCGAAGGTGGTTTGTTGGAGGTGGTATTCGTGCATCAAGCGCTAGAAACACTATCCAAC 540
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 CTGCATGCCTGTTCGTTCGTACTGGAACAGAAGCAGGGTAAGCGTTTGCCCGAGCTGTTT 600
consensus_6608#1 ---------------------------------CCGCCCACGCGTCCGG--AAGCATCTC 25
* * * **** * *** *
consensus_6608#0 CCAGCCGTGCTCAATGAAAA---TGCTTGGGTGCAGACGTCTACCAGC---ACAAGAGTG 654
consensus_6608#1 ATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGA-ATGTAGCTGTGAAACAAGAGTG 84
** **** ***** ***** *** *** * ** * * *********
consensus_6608#0 AAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGG 714
consensus_6608#1 AAGGATGTGGCCAATGTTATCAAGCTGTACACCGAGCTGGTGAAGATATGCGATCACTGG 144
************************************************************
consensus_6608#0 CACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTAC 774
consensus_6608#1 CACGGTCCACGAAAACAAACCATTCTCGAGCGGCTAGCACCGCTGATAAGAAAGATTTAC 204
************************************************************
consensus_6608#0 ACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCATGGTGATCTTTGGTGT 834
consensus_6608#1 ACGTACGTTGAACCGTCGCACGAATTCCGCAACTGTCTCAATCACGGTGATCTTTGGTGT 264
******************************************** ***************
consensus_6608#0 AACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGAC 894
consensus_6608#1 AACAACATCATGTTCAAGTGCGATGGCCAAGGACAGCCGATCGGTTGCGCGCTGGTAGAC 324
************************************************************
consensus_6608#0 TATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACG 954
consensus_6608#1 TATCAACTGTCACGTTATGTGCCACCGGCGTACGACATCAACCTGTTGCTGTACCTAACG 384
************************************************************
consensus_6608#0 ACCAGTCGTCAATTGCGAGACGAGAATCTATCTGTGCTGTTAGACCATTATTACAAGTGT 1014
consensus_6608#1 ACTAGTCGTCAATTGCGAGACGAGAATCTAACTGCACTGTTAGACCATTATTACAAGTGT 444
** *************************** *** ************************
consensus_6608#0 TTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACG 1074
consensus_6608#1 TTCGTGGACACGCTGGAACGAAATCAGGTGAATGCGAGCGAGATTTATCCTCGCGAAACG 504
************************************************************
consensus_6608#0 TTTCTTCGGTGCTGCGAGCATTACAGACTCGCAGGGCTCATCCACTCGACGATTATCAGC 1134
consensus_6608#1 TTTCTTCGGTGCTGCGAGCATT-------------------------------------- 526
**********************
consensus_6608#0 GGTGAGGTGACTCTGCCGAGCAAGTTTTTGGAGGAAATATTCGGTGACCTGCAGAGTACG 1194
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 GCTAGCTTTATGCCGGACACGAAGGTGTGGATTTGTGTAAAGGCTTTCCAGGCAGACGAA 1254
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 CGCTACCGGAAGCATCTGATAGAGTTGCTAGATGAACTGTTTGCTTATGTGTAGAATGTA 1314
consensus_6608#1 ------------------------------------------------------------
consensus_6608#0 GCTGCGAAGAAAGTGTGTGACGTTTTCATTTATGCAAAAGTATTAAAT 1362
consensus_6608#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||