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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6735#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 745 fasta sequence
[CCGGTGACGTGGATGTTACCTTATATTATATTTTCGGTTTGCCGGCAAAACACCTGTAGTGATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATG-TTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACAC--AAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGT-CAA-GGGAGCAGTAGCTGGAATAATTTTAATTTTGTTTGTGGTATATTTTTGGGTCATTTGATAGTAATTTATATGTCATTCAAGCTATGTGTGAT]
[+] EMBL BX628365 [CCGGTGACGTGGATGTTACCTTATATTATATTTTCGGTTTGAGTGCAAAACACCTGTAGTGATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAA ATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATG TTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACAC AAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGT CAA GGGAGCAGTAGCTGGAATAATTTTA ]
[+] EMBL BM631734 [ CCGGCAAAACACCTGTAGTGATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATG TTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACAC AAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGT CAA GGGAGCAGTAGCTGGAATAATTTTAATTTTGTTTGTGGTATATTTTTGGGTCATTTGATAGTAATTTATATGTCATTCAAG ]
[+] EMBL BM604049 [ CCGGCAAAACACCTGTAGTGATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAA ]
[+] EMBL AL693458 [ AACACCTGTAGTGATTAATTCTAGAGAATGGCCCTCATGACGATGATTGCACGCTTTGTAGATGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAA TTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATGTTTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACACCAAAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGTACAAGGGGAGCAGTAGCTGGAATAATTTTAATAAGGAAGGT CATA TTGGGTCATTGGATAGTAA TATATGTCA TCAAGCTATGTGTGAT]
[+] EMBL BM633302 [ AACACCTGTAGTGATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATG TTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACAC AAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGT CAA GGGAGCAGTAGCTGGAATAATTTTAATTTT ]
consensusID : consensus_6735#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[AACACCTGTAGTGATTAATTCTAGAGAATGGCCCTCATGACGATGATTGCACGCTTTGTAGATGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATGTTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACACAAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGTCANGGAG]
[+] EMBL BX626179 [AACACCTGTAGTGATTAATTCTAGAGAATGGCCCTCATGACGATGATTGCACGCTTTGTAGATGGCCTTCCGCTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAATCAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAAACCGGGCCTTATTTGTTTCATTATGTGCGACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTTCACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTTGATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCTATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATGTTTTGCAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACACAAAATTTATCGATGCTCTCTCAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGTCANGGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6735#0 CCGGTGACGTGGATGTTACCTTATATTATATTTTCGGTTTGCCGGCAAAACACCTGTAGT 60
consensus_6735#1 ------------------------------------------------AACACCTGTAGT 12
************
consensus_6735#0 GATTAATTCTAGAGAATGGCCCTAATGACGATGATTGCACGCTTTGTAGACGGCCTTCCG 120
consensus_6735#1 GATTAATTCTAGAGAATGGCCCTCATGACGATGATTGCACGCTTTGTAGATGGCCTTCCG 72
*********************** ************************** *********
consensus_6735#0 CTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAAT 180
consensus_6735#1 CTCGTGGGAACTATGCAGGAAGATGAGCAGTCCGGCCGAAGCATATTGGAGTATCAAAAT 132
************************************************************
consensus_6735#0 CAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAA 240
consensus_6735#1 CAAGCTAAATTGCTGTTTCGAAAACTGGGACCCAACTCACCAACCCGATGCAGCATAGAA 192
************************************************************
consensus_6735#0 ACCGGGCCTTATTTGTTTCATTATTTGATCGAACATGATGTTTGCTATTTAGTTATGTGC 300
consensus_6735#1 ACCGGGCCTTATTTGTTTCATTAT--------------------------------GTGC 220
************************ ****
consensus_6735#0 GACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTT 360
consensus_6735#1 GACAAGGTGTTTTCGAAACGAATCGCTTTCACATATCTGGAAGATATCGCCCAGGAATTT 280
************************************************************
consensus_6735#0 CACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTT 420
consensus_6735#1 CACAGTAACTATGGAAGGAGAGTAAATACAGTGACTAGACCGTACGCTTTTATTGAATTT 340
************************************************************
consensus_6735#0 GATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCT 480
consensus_6735#1 GATATTTATATCCAGAAAGCCCGGAAAAACCTAACAGATCGTAGGAGAAATATAAATGCT 400
************************************************************
consensus_6735#0 ATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATGTTTTG 540
consensus_6735#1 ATAAATAATCAGTTACAAGATGTGCAAAGGATTATGGTACAAAATATTGATGATGTTTTG 460
************************************************************
consensus_6735#0 CAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACACAAAATTTATCGATGCTCTCT 600
consensus_6735#1 CAACGCGGGACTGTTCTATCTGAACTGGATACCAAAACACAAAATTTATCGATGCTCTCT 520
************************************************************
consensus_6735#0 CAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGTCAAGGGAGCA 660
consensus_6735#1 CAGAAGTACAAGAAGGATGCTTCATATTTGAACCGCAAATCGCTGTACGTCANGGAG--- 577
**************************************************** **
consensus_6735#0 GTAGCTGGAATAATTTTAATTTTGTTTGTGGTATATTTTTGGGTCATTTGATAGTAATTT 720
consensus_6735#1 ------------------------------------------------------------
consensus_6735#0 ATATGTCATTCAAGCTATGTGTGAT 745
consensus_6735#1 -------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||