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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6776#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 796 fasta sequence
[CAGAATGCCCCAGGTTTGAAAACAGGGTGCAACGATGGGCTGCTCGAACCTTCATNCACACTGCCAGATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCTGAAGATTAAGTGATGATATGTATGCTGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCTGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCTGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCTGCAGATCAACAGTCCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCCATTGGCGCTGCACGGTGCACCGACGGCGGAGCTGGCGAATGGTGCCTGCGGCTGACCAGCCACTGGACCCTGCATGCAATCTACTACCCTGCCCTGCTTCGTATCCGCCACGGTGCTGCAAGTTCATGGTGGGCTTCGCAGTTGCTATGCCAGGCGCAGCGTGATCTGACGNGCTGACACAGGCCGCCGACAGGCTTCGCTGGACTCTCCGGCAAACGACNNCTACAGTGCAGCAGCTGTGAAGCGGCAGGGGCTATCGCAGCGACGCTGAGCTATCTAACGTCGTGCCACGGTCATACTCGAGCCACTATNGNGCGACAGACAGAAGCCGCTATAGATTAAAGGGTATACACGTAGCAACAGANAGTAANCGAACTCGNGGTTGTACATAT]
[+] EMBL AL694089 [CAGAATGCCCCAGGTTTGAAAACAGGGTGCAACGATGGGCTGCTCGAACCTTCATNCACACTGCCAGATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCTGAAGATTAAGTGATGATATGTATGCTGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCTGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCTGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCTGCAGATCAACAGTCCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCCATTGGCGCTGCACGGTGCACCGACGGCGGAGCTGGCGAATGGTGCCTGCGGCTGACCAGCCACTGGACCCTGCATGCAATCTACTACCCTGCCCTGCTTCGTATCCGCCACGGTGCTGCAAGTTCATGGTGGGCTTCGCAGTTGCTATGCCAGGCGCAGCGTGATCTGACGNGCTGACACAGGCCGCCGACAGGCTTCGCTGGACTCTCCGGCAAACGACNNCTACAGTGCAGCAGCTGTGAAGCGGCAGGGGCTATCGCAGCGACGCTGAGCTATCTAACGTCGTGCCACGGTCATACTCGAGCCACTATNGNGCGACAGACAGAAGCCGCTATAGATTAAAGGGTATACACGTAGCAACAGANAGTAANCGAACTCGNGGTTGTACATAT]
consensusID : consensus_6776#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 727 fasta sequence
[GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATATGTTGCGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCGCAGATCAACAGTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCATGGGCTGGCACGGTGCACCGAC-GGCGGGGCTGGCGAATGGTGCCGCGGCTGACCAGCACTGGACCCTGCATGCAATCTACTACCCGCCCCTGCTTCGTTCCGCCACGGTGCGCAAGTTCATGGTGGGCTTCGAGTTGCTATGCCAGGCGCAGCGTGATCTGACGGCTGAACAGGCCGCCGACAGGCTTCGTGGACTCTCCGGCAAACGACACTACAGTGAGCAGCTGTGAAGCGGAGGGGCTATCGAGGAGTGAGCTATCTAATCGTGCCACGGTCATATCGAGCATATTGGGACAGACAGAGCGCTTAGATAAGGGTTTAGTGCAGCGGGTTTCGGTGGGTGTACATTCCAGTGTACGTGAATAAAGTACCTTATCCGATGTTATAAGTATCAAAAA]
[-] EMBL CNS08VA0 [GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATATGTTGCGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCGCAGATCAACAGTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCATGGGCTGGCACGGTGCACCGAC GGCGGGGCTGGCGAATGGTGCCGCGGCTGACCAGCACTGGACCCTGCATGCAATCTACTACCCGCCCCTGCTTCGTTCTGCCACGGTGCGCAAGTTCATGGTGGGCTTCGAGTTGCTATGCCAGGCGCAGCGTGATCTGACGGCTGAACAGGCCGCCGACAGGCTTCGTGGACTCTCCGGCAAACGACACTACAGTGAGCAGCTGTGAAGCGGAGGGGCTATCGAGGAGTGAGCTATCTAATCGTGCCACGGTCATATCGAGCATATTGGGACAGACAGAGCGCTTAGATAAGGGTTTAGTGCAGCGGGTTTCGGTGGGTGTACATTCCAGTGTACGTGAATAAAGTACCTTATCCGATGTTATAAGTATCAAAAA]
[-] EMBL CNS09PTZ [GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATATGTTGCGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGAACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCGCAGATCAACAGTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCATGGGCTGGCACGGTGCACCGACGGGCGGGGCTGGCGAATGGTGCCGCGGCTGACCAGCACTGGACCCTGCATGCAATCTACTACCCGCCCCTGCTTCGTTCCGCCACGGTGCGCAAGTTCATGGTGGGCTTCGAGTTGCTATGCCAGGCGCAGCGTGATCTGACGGCTGAACAGGCCGCCGACAGGCTTCGTGGACTCTCCGGCAAACGACACTACAGTGAGCAGCTGTGAAGCGGAGGGGCTATCGAGGAGTGAGCTATCTAATCGTGCCACGGTCATATCGAGCATATTGGGACAGACAGAGCGCTTAGATAAGGGTTTAGTGCAGCGGGTTTCGGTGGGTGTACATTCCAGTGTACGTGAATAAAGTACCTTATCCGATGTTTTA ]
[-] EMBL CNS09BHZ [GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATATGTTGCGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGTTTTCGCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCGCAGATCAACAGTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCATGGGCTGGCACGGTGCATCGAC GGCGGGGCTGGCGAATGGTGCCGCGGCTGACCAGCACTGGACCCTGCATGCAATCTACTACCCGCCCCTGCTTCGTTCCGCCACGGTGCGCAAGTTCATGGTGGGCTTCGAGTTGCTATGCCAGGCGCAGCGTGTTCTGACGGCTGAACAGGCCGCCGACAGGCTTCGTGGACTCTCCGGCAAACGACACTACAGTGAGCAGCTGTGAAGCGGAGGGGCTATCGAGGAGTGAGCTATCTAATCGTGCCACGGTCATATCGAGCATATTGGGACAGACAGAGCGCTTAGATAAGGGTTTAGTGCAGCGGGTTTCGGTGGGTGTACATTCCAGTGTACGTGAATAAAta ]
[-] EMBL CNS08DR6 [GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATATGTTGCGGCAGTACTACGCAGCTCATGGAACGGCTCTATTTTTTTATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGGACTGGCTGGTGGTGGTTCCGTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCGAAATCGGAACAAGCGCATCACCGACCTAACTTTGCCGCAGATCAACAGTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCATGGGCTGGCACGGTGCACCGAC GGCGGAGCTGGCGAATGGTGCCGCGGCTGACCAGCACTGGACCCTGCATGCAATCTACTACCCGCCCCTGCTTCGTTCCGCCACGGTGCGCAAGTTCATGGTGGGCTTCGAGTTGCTATGCCAGGCGCAGCGTGATCTGACGGCTGAACAGGCCGCCGACAGGCTTCGTGGACTCTCCGGCAAACGACACTACAGTGAGCAGCTGTGAAGCGGAGGGGCTATCGAGGAGTGAGCTATCTAATCGTGCCACGGTCATATCGAGCATATTGGGACAGACAGAGCGCTTAGATAAGGGTTTAGTGCAGCGGGTTTCGGTGGGTGTACATTCCAGTGTACGTGAATAAAG ]
[-] EMBL CNS097JJ [GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCGAAGATTAAGGATGATTTGTTGCGGCAGTACTACGCGGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCGCGAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCGAACTGGCTGGTGGTGGTTCCGTTTTGGGCAGTGTGGCCGTTCGAAACGATGCTGTTTTCGCGAAATCGGAAAAAGCGCATCACCGACCTAACTTTGCCGCAGTTCAACATTCTAGCGATCGTGATCAAGGAGCTGACCACCAAGTACGAAAATCTCTTAAAGTGCTCGTTTCCGTACAGCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6776#0 CAGAATGCCCCAGGTTTGAAAACAGGGTGCAACGATGGGCTGCTCGAACCTTCATNCACA 60
consensus_6776#1 ------------------------------------------------------------
consensus_6776#0 CTGCCAGATCTGGGCCTGCTCGTTTCTGCCGAATGAGCCTGAAGATTAAGTGATGATATG 120
consensus_6776#1 ------GATCTGGGCCTGCTCGTTTCTGCCGAATGAGCC-GAAGATTAAG-GATGATATG 52
********************************* ********** *********
consensus_6776#0 TATGCTGGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACCTGC 180
consensus_6776#1 T-TGC-GGCAGTACTACGCAGCTCATGGAACGGCTCTACTGGATGATTACGTGAACC-GC 109
* *** *************************************************** **
consensus_6776#0 GAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCCTGGACTGGCTGGTGGTGGTTCC 240
consensus_6776#1 GAATTGATTAAGAGGGAGCGAATTGTCATCGAGAATCC-GGACTGGCTGGTGGTGGTTCC 168
************************************** *********************
consensus_6776#0 GTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGCCGAAATCGGAACAAGCGCA 300
consensus_6776#1 GTTCTGGGCAGTGTGGCCGTTCGAAACGATGCTGATTTCGC-GAAATCGGAACAAGCGCA 227
***************************************** ******************
consensus_6776#0 TCACCGACCTAACTTTGCCTGCAGATCAACAGTCCTAGCGATCGTGATCAAGGAGCTGAC 360
consensus_6776#1 TCACCGACCTAACTTTGCC-GCAGATCAACAGTC-TAGCGATCGTGATCAAGGAGCTGAC 285
******************* ************** *************************
consensus_6776#0 CACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGCCATTGGCGCTGCACGGT 420
consensus_6776#1 CACCAAGTACGACAATCTCTTCAAGTGCTCGTTTCCGTACAGC-ATGGGC-TGGCACGGT 343
******************************************* ** *** *******
consensus_6776#0 GCACCGACGGCGGAGCTGGCGAATGGTGCCTGCGGCTGACCAGCCACTGGACCCTGCATG 480
consensus_6776#1 GCACCGACGGCGGGGCTGGCGAATGGTGCC-GCGGCTGACCAGC-ACTGGACCCTGCATG 401
************* **************** ************* ***************
consensus_6776#0 CAATCTACTACCCTGCCCTGCTTCGTATCCGCCACGGTGCTGCAAGTTCATGGTGGGCTT 540
consensus_6776#1 CAATCTACTACCCGCCCCTGCTTCGT-TCCGCCACGGTGC-GCAAGTTCATGGTGGGCTT 459
************* *********** ************* *******************
consensus_6776#0 CGCAGTTGCTATGCCAGGCGCAGCGTGATCTGACGNGCTGACACAGGCCGCCGACAGGCT 600
consensus_6776#1 CG-AGTTGCTATGCCAGGCGCAGCGTGATCTGACGG-CTGA-ACAGGCCGCCGACAGGCT 516
** ******************************** **** ******************
consensus_6776#0 TCGCTGGACTCTCCGGCAAACGACNNCTACAGTGCAGCAGCTGTGAAGCGGCAGGGGCTA 660
consensus_6776#1 TCG-TGGACTCTCCGGCAAACGACAC-TACAGTG-AGCAGCTGTGAAGCGG-AGGGGCTA 572
*** ******************** ******* **************** ********
consensus_6776#0 TCGCAGCGACGCTGAGCTATCTAACGTCGTGCCACGGTCATACTCGAGCCACTATNGNGC 720
consensus_6776#1 TCGAGGAG----TGAGCTATCTAA--TCGTGCCACGGTCATA-TCGAGC----ATATTGG 621
*** * * ************ **************** ****** ** *
consensus_6776#0 GACAGACAGAAGCCGCTATAGATTAAAGGGTATACACGTAGCAACAGANAGTAANCGAAC 780
consensus_6776#1 GACAGACAGAG--CGCT-TAGAT--AAGGGTTTA-GTGCAGCGGGTTTCGGTGGGTGTAC 675
********** **** ***** ****** ** * *** ** * **
consensus_6776#0 TCGNGGTTGTACATAT------------------------------------ 796
consensus_6776#1 ATTCCAGTGTACGTGAATAAAGTACCTTATCCGATGTTATAAGTATCAAAAA 727
***** *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||