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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6801#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1053 fasta sequence
[CCGGGATCAACGAACAAAGTCGTTGATATGTAAACAAAAGGAAAAATCAGGATTCGGGTGGGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGGGAA-CCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACGAAAGGCGTGGACGTTCGATTACGTGTGCCGGGAGCTGCTCAAGGTGCCGACCGACATTCCGGTGCTGCTGCTCGGCAATCACTGTGATATGGGACACCATCGCGTGATTACGGCGGAACAGGTGCACGGGTTCGTCGAGACGGCCAGCCAGGAGCGGAAGGCGGAAATCGTGTACGGGGACAGCTCGATGCGCAACGGGTTCGGGCTGCGGCTGCTGCACAAGTTCTTCGGCATTCCATTCCTCTACCTGCAGAAGAGTGCCCTCGAGGCGTCGCTGAGGAAAAACGCACAGGATCTCGACATCTGCCGGCTGGAGATCGATGAATATCAGAAGTCCGACGACTCCGATTACGGACGCTTTCTGGATAATCTGATC]
[+] EMBL BM622185 [CCGGGATCAACGAACAAAGTCGTTGATATGTAAACAAAAGGAAAAATCAGGATTCGGGTGGGTGGAAAAGTTAGAGCCCCAAAGGTGGAAAACCTACCAACTGTTTTGGTGGGTTCAAGGGAACCCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGA GTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGT ]
[+] EMBL BM655948 [ ccgCGTTGATATGTAAACAAAAGGAAAAATCAGGATTCGGGTGGGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGGGAA CCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACGAAAGGCGTGGACGTTCGATTACGTG ]
[+] EMBL BM632575 [ ccgCAGGATTCGGGTGGGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGGGAA CCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGATAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACGA ]
[+] EMBL BM630297 [ ccgAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACG AAGGCGTGGACGTTCGATTACGTGTGCCGGGAGCTGCTCAAGGTGCCGACCGACATTCCGGTGCTGCTGCTCGGCAATCACTGTGATATGGGACACCATCGCGTGATTACGGCGGAACAGGTGCACGGGTTCGTCGAGACGGCCAGCCAGGAGCGGAAGGCGGAAATCGTGTACGGGGACAGCTCGATGCGCAACGGGTTCGGGCTGCGGCTGCTGCACAAGTTCTTCGGCATTCCATTCCTCTACCTGCAGAAGAGTGCCCTCGAGGCGTCGCTGAGGAAAAACGCACAGGATCTCGACATCTGCCGGCTGGAGATCGATGAATATCAGAAGTCCGACGACTCCGATTACGGACGCTTTCTGGATAATCTGATC]
consensusID : consensus_6801#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[CCGCCCACGCGTCCGGTGGGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGGGAACCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACGAAGGCGTGGACGTTTCGATTACGTGTGCCGGGAGCTGCCCAAGGTGC]
[+] EMBL BM611924 [CCGCCCACGCGTCCGGTGGGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGGGAACCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGTGTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCTTCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCCAGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAGTCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCAAAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGTCGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGAAATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCGACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGATGGTGATGGACATTACGAAGGCGTGGACGTTTCGATTACGTGTGCCGGGAGCTGCCCAAGGTGC]
consensusID : consensus_6801#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 75 fasta sequence
[TGATGGTGACTGGACATTACGAAGGCGTGGACTGTTCGATTACGTGTGCCTGGGAGCTGCCAATGTGCGACGACA]
[+] EMBL AL694586 [TGATGGTGACTGGACATTACGAAGGCGTGGACTGTTCGATTACGTGTGCCTGGGAGCTGCCAATGTGCGACGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6801#0 CCGGGATCAACGAACAAAGTCGTTGATATGTAAACAAAAGGAAAAATCAGGATTCGGGTG 60
consensus_6801#1 ------------------------------------------CCGCCCACGCGTCCGGTG 18
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 GGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGG 120
consensus_6801#1 GGTGGAAAAGTTAGAGCCACCAAGGTGGAAAACCTACCAGCTGTTTTGGTGGGTTCAAGG 78
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 GAACCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGT 180
consensus_6801#1 GAACCCGTAGTGCGTCATCCCGAATGCAACAGTTCCATCGATAAGGGAGCGTGTGTGTGT 138
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 GTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCT 240
consensus_6801#1 GTGCCTGTGATGAGTGGAGCGTAATCTCGTCGCCCGCAAGTCGAGTCATGTTTTCCGTCT 198
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 TCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCC 300
consensus_6801#1 TCAAGAAGCTAGCCAACAAAAACGATGGCCCGACCGTGTCGATACCGGAGTCCGTTGGCC 258
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 AGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAG 360
consensus_6801#1 AGACGATGTCGGATTCGCTTAAGAAGCGATTTTCCCGTGGCGTCCAGTACAACATGAAAG 318
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 TCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCA 420
consensus_6801#1 TCGTGATCAAGGGCGATCGGAACGTGGGCAAATCGTGTCTGCTGGAGCGGCTGCAGGGCA 378
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 AAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGT 480
consensus_6801#1 AAGCCTTCATCGAGCAGTACACGCCGACGGAGCAGATCCAGGTCGCCAGCATCCAGTGGT 438
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 CGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGA 540
consensus_6801#1 CGTTCAAGGCGACGGACGACGTGGTCAAGGTGGAGGTGTGGGACGTGGTGGACCGTGGGA 498
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 AATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCG 600
consensus_6801#1 AATCGAAGCAGAAGAGCACGAACCTGAAGCTGACGACGGCCGGCGCAGGTGCGGAACCCG 558
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 ACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGA 660
consensus_6801#1 ACATTCCCGTGCTGGACGCCGAGTTTCTCGACGTGTACAAGGGCACCCACTGTGTGGTGA 618
consensus_6801#2 ---------------------------------------------------------TGA 3
***
consensus_6801#0 TGGTGA-TGGACATTACGAAAGGCGTGGACGTT-CGATTACGTGTGCC-GGGAGCTGCTC 717
consensus_6801#1 TGGTGA-TGGACATTACGAA-GGCGTGGACGTTTCGATTACGTGTGCC-GGGAGCTGCCC 675
consensus_6801#2 TGGTGACTGGACATTACGAA-GGCGTGGACTGTTCGATTACGTGTGCCTGGGAGCTGC-C 61
****** ************* ********* * ************** ********* *
consensus_6801#0 AAGGTGCCGACCGACATTCCGGTGCTGCTGCTCGGCAATCACTGTGATATGGGACACCAT 777
consensus_6801#1 AAGGTGC----------------------------------------------------- 682
consensus_6801#2 AATGTGCGACGACA---------------------------------------------- 75
** ****
consensus_6801#0 CGCGTGATTACGGCGGAACAGGTGCACGGGTTCGTCGAGACGGCCAGCCAGGAGCGGAAG 837
consensus_6801#1 ------------------------------------------------------------
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 GCGGAAATCGTGTACGGGGACAGCTCGATGCGCAACGGGTTCGGGCTGCGGCTGCTGCAC 897
consensus_6801#1 ------------------------------------------------------------
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 AAGTTCTTCGGCATTCCATTCCTCTACCTGCAGAAGAGTGCCCTCGAGGCGTCGCTGAGG 957
consensus_6801#1 ------------------------------------------------------------
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 AAAAACGCACAGGATCTCGACATCTGCCGGCTGGAGATCGATGAATATCAGAAGTCCGAC 1017
consensus_6801#1 ------------------------------------------------------------
consensus_6801#2 ------------------------------------------------------------
consensus_6801#0 GACTCCGATTACGGACGCTTTCTGGATAATCTGATC 1053
consensus_6801#1 ------------------------------------
consensus_6801#2 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||