cluster # 681

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 681 cluster # 681 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_681#0 length = 688 sequences # 1

consensus_681#1 length = 679 sequences # 1

consensusID : consensus_681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence

                              [CCGCAGCGGCGTACGTGACGTACATCAACAACAACGACGCGCTGAGGGCGATCCAAAGCGTTAACAACATCATGATCGATGGTCGACTGATAAAGACGAGCTTAGGTACGACGAAGTACTGTAGCCACTTTATGAAAAACCAAACCTGTCCCAAGCCGGACTGCATGTACTTGCACGAGCTCGGCGACCAGGAGGCTAGCTTTACGAAGGAGGAGATGCACCAAGGGAAGCATCAAGAGTACGAGAAGCGGCTGCACGATGCCATGCAGGCGCAGTTAGGTCTGACGTCTGCAGCAGGAGGGCATGGCAGCAACGGCAGTGGTAGTGCGGCGGCAACGGCAGCGACGGCGGCGTCCTCTGGCGGTGGTACGGCCACCGCGGCCCCGACCGCCGGCCTGGTGTCGTCGACGGCGGCGGCAGTGGTGGCGGCGTCGGCGACGACGGCAGCGGCGGCTGTTGCGGCGGGAACAACTGCAGTTAATGGGAATAGCGCCGGCAACAAGGAAAACTCGAACCGAAGCGACCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGACAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGCTGCTGCGAA]

[+] EMBL BM587319             [CCGCAGCGGCGTACGTGACGTACATCAACAACAACGACGCGCTGAGGGCGATCCAAAGCGTTAACAACATCATGATCGATGGTCGACTGATAAAGACGAGCTTAGGTACGACGAAGTACTGTAGCCACTTTATGAAAAACCAAACCTGTCCCAAGCCGGACTGCATGTACTTGCACGAGCTCGGCGACCAGGAGGCTAGCTTTACGAAGGAGGAGATGCACCAAGGGAAGCATCAAGAGTACGAGAAGCGGCTGCACGATGCCATGCAGGCGCAGTTAGGTCTGACGTCTGCAGCAGGAGGGCATGGCAGCAACGGCAGTGGTAGTGCGGCGGCAACGGCAGCGACGGCGGCGTCCTCTGGCGGTGGTACGGCCACCGCGGCCCCGACCGCCGGCCTGGTGTCGTCGACGGCGGCGGCAGTGGTGGCGGCGTCGGCGACGACGGCAGCGGCGGCTGTTGCGGCGGGAACAACTGCAGTTAATGGGAATAGCGCCGGCAACAAGGAAAACTCGAACCGAAGCGACCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGACAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGCTGCTGCGAA]




>consensus_681#0
CCGCAGCGGCGTACGTGACGTACATCAACAACAACGACGCGCTGAGGGCGATCCAAAGCG
TTAACAACATCATGATCGATGGTCGACTGATAAAGACGAGCTTAGGTACGACGAAGTACT
GTAGCCACTTTATGAAAAACCAAACCTGTCCCAAGCCGGACTGCATGTACTTGCACGAGC
TCGGCGACCAGGAGGCTAGCTTTACGAAGGAGGAGATGCACCAAGGGAAGCATCAAGAGT
ACGAGAAGCGGCTGCACGATGCCATGCAGGCGCAGTTAGGTCTGACGTCTGCAGCAGGAG
GGCATGGCAGCAACGGCAGTGGTAGTGCGGCGGCAACGGCAGCGACGGCGGCGTCCTCTG
GCGGTGGTACGGCCACCGCGGCCCCGACCGCCGGCCTGGTGTCGTCGACGGCGGCGGCAG
TGGTGGCGGCGTCGGCGACGACGGCAGCGGCGGCTGTTGCGGCGGGAACAACTGCAGTTA
ATGGGAATAGCGCCGGCAACAAGGAAAACTCGAACCGAAGCGACCGAAAGCACGAAACGA
AATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACA
ACAACAAAAATAGTCACGACAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTA
GTGCCAACGGTGTTGTTGCTGCTGCGAA

consensusID : consensus_681#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGACAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGCTGCTGCGAAGGGTGGCAGTGCGGCGTTGGTAAACGGCAAAGGAAGCAAGGCTTCGAACGGAAAGCAGCAGCAGCGGAACGGTGCTAGCAACGCCCCAGAAGCTCACGAGCATGCGATTGTGAACGGTAACAGCAAGGAGGCACAGAACAATAGCAAAAACCTGAAGCAGCAGCAGCGCGAACGCGAACGGGAACAGCGGGAGCAGCAATCCCTGCTCAAGGGAAGCAGTGATAGCGGCGAGCAGCAGCAACAGCAGCAGCAGAAACAGCAGCAACCACCACAGAGCAAAAAGCGAGAAGCTAACGGCACCAGCAATGGCCCCACGGCGACCAGCATTAGCAATGGGAACGCAAATGGAAACGGCCATATTATCAATAATGATCTGGACGATGACGATGACGAGCTGGACTTTGAGGATCTGGACAATGACGCACTGTCGTCGGACAATGATGGCAAAACGGATTCGCCTTCGTTAAGTAGTTCGGCTTCCTCCCGGAAC]

[+] EMBL BM575209             [CCGCCCACGCGTCCGCCCACGCGTCCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGACAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGCTGCTGCGAAGGGTGGCAGTGCGGCGTTGGTAAACGGCAAAGGAAGCAAGGCTTCGAACGGAAAGCAGCAGCAGCGGAACGGTGCTAGCAACGCCCCAGAAGCTCACGAGCATGCGATTGTGAACGGTAACAGCAAGGAGGCACAGAACAATAGCAAAAACCTGAAGCAGCAGCAGCGCGAACGCGAACGGGAACAGCGGGAGCAGCAATCCCTGCTCAAGGGAAGCAGTGATAGCGGCGAGCAGCAGCAACAGCAGCAGCAGAAACAGCAGCAACCACCACAGAGCAAAAAGCGAGAAGCTAACGGCACCAGCAATGGCCCCACGGCGACCAGCATTAGCAATGGGAACGCAAATGGAAACGGCCATATTATCAATAATGATCTGGACGATGACGATGACGAGCTGGACTTTGAGGATCTGGACAATGACGCACTGTCGTCGGACAATGATGGCAAAACGGATTCGCCTTCGTTAAGTAGTTCGGCTTCCTCCCGGAAC]




>consensus_681#1
CCGCCCACGCGTCCGCCCACGCGTCCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGG
CAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGA
CAATTCCAGTAATCATAAAGATAGTACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGC
TGCTGCGAAGGGTGGCAGTGCGGCGTTGGTAAACGGCAAAGGAAGCAAGGCTTCGAACGG
AAAGCAGCAGCAGCGGAACGGTGCTAGCAACGCCCCAGAAGCTCACGAGCATGCGATTGT
GAACGGTAACAGCAAGGAGGCACAGAACAATAGCAAAAACCTGAAGCAGCAGCAGCGCGA
ACGCGAACGGGAACAGCGGGAGCAGCAATCCCTGCTCAAGGGAAGCAGTGATAGCGGCGA
GCAGCAGCAACAGCAGCAGCAGAAACAGCAGCAACCACCACAGAGCAAAAAGCGAGAAGC
TAACGGCACCAGCAATGGCCCCACGGCGACCAGCATTAGCAATGGGAACGCAAATGGAAA
CGGCCATATTATCAATAATGATCTGGACGATGACGATGACGAGCTGGACTTTGAGGATCT
GGACAATGACGCACTGTCGTCGGACAATGATGGCAAAACGGATTCGCCTTCGTTAAGTAG
TTCGGCTTCCTCCCGGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_681#0      ------CCGCAGCGGCGTACGTGACGTACATCA-ACAACAACGACGCGCT--GAGGGCGA 51
consensus_681#1      CCGCCCACGCGTCCGCCCACGCGTCCGAAAGCACGAAACGAAATCTCGCTCGAAAGGAGG 60
                            ***  * **  *** * *  * * **   *** *   * ****   * ** * 

consensus_681#0      TCCAAAGCGTTAACAACATCATGATCGATGGTCGACTGATAAAGACGAGCTTAGGTACGA 111
consensus_681#1      CAAAAACAAGCAGCAGCAGCAGCAACAGCAGCAACAACACAACAACAAAAATAGTCACGA 120
                        ***     * ** ** **  * *    *       * **  ** *   ***  ****

consensus_681#0      CGAAGTACTGTAGCCACTTTATGAAAAACCAAACCTGTCCCAAGCCGGACTGCATGTACT 171
consensus_681#1      C-AATTCCAGTAATCA--TAAAGATAGTACAAGC--AACGTGACTAGTGCCAACGGTGTT 175
                     * ** * * ***  **  * * ** *   *** *    *   *   *  *     **  *

consensus_681#0      TGCACGAGCTCGGCGACCAGGAGGCTAGCTTTACGAAGGAGGAGATGCACCAAGGGAAGC 231
consensus_681#1      GTTGCTGCTGCGAAGGGTGGCAGTGCGGCGTTGGTAAACGGCAAAGG----AAGCAAGGC 231
                         *     **  *    * **    ** **   **   * * * *    ***  * **

consensus_681#0      ATCAAGAGTACGAGAAGCGGCTGCACGATGCCATGCAGGCGCAGTTAGGTCTGACGTCTG 291
consensus_681#1      TTCGA----ACGGAAAGCAGCAGCA----GCGGAACGGTGCTAGCAACGCCCCA-----G 278
                      ** *    ***  **** ** ***    **    * *    **  * * *  *     *

consensus_681#0      CAGCAGGAGGGCATGGCAGCAACGGCAGTGGTAGTGCGGCGGCAACGGCAGCGACGGCGG 351
consensus_681#1      AAGCTCACGAGCATGCGATTGTGAACGGTAACAGCAAGGAGGCACAG--AACAATAGCAA 336
                      ***    * *****  *       * **   **   ** ****  *  * * *  **  

consensus_681#0      CGTCCTCTGGCGGTGGTACGGCCACCGCGGCCCCGACCGCCGGC--CTGGTGTCGTCGA- 408
consensus_681#1      AAACCTGAAGCAGCAGCAGCGCGAACGCGAACGGGAACAGCGGGAGCAGCAATCCCTGCT 396
                        ***   ** *  * *  ** * ****  *  ** *  ***   * *   **   *  

consensus_681#0      CGGCGGCGGCAGTGGTGGCGGCGTCGGCGACGACGGCAGCGGCGGCTGTTGCGGCGGGAA 468
consensus_681#1      CAAGGGAAGCAGTGATAGCGGCG--AGCAGCAGCAACAGCAGCAGCAGAAACAGCAGCAA 454
                     *   **  ****** * ******   **  *  *  **** ** ** *   * ** * **

consensus_681#0      CAACTGCAGT-TAATGGGAATAGCGCCGGCAACAAGGAAAACTCGAACCGAAGCGACCGA 527
consensus_681#1      CCACCACAGAGCAAAAAGCGAGAAGCTAACGGCACCAGCAA-TGGCCCCACGGCGACCAG 513
                     * **  ***   **   *      **   *  **     ** * *  **   ******  

consensus_681#0      AAGCACGAAACGAAATCTCGCTCGAAAGGAGGCAAAAACAAGCAGCAGCAGCAGCAACAG 587
consensus_681#1      CATTAGCAATGGGAACGCAAATGGAAACGGCCATATTATCAATAATGATCTGGACGATGA 573
                      *  *  **  * **      * **** *     *  *  *  *          * *   

consensus_681#0      CAGCAACAA-CACAACAACAAAAATAGTCACGACAATTC-CAGTAATC--ATAAAGATAG 643
consensus_681#1      CGATGACGAGCTGGACTTTGAGGATCTGGACAATGACGCACTGTCGTCGGACAATGATGG 633
                     *    ** * *   **    *  **    ** *  *  * * **  **  * ** *** *

consensus_681#0      TACAAGCAACGTGACTAGTGCCAACGGTGTTGTTGCTGCTGCGAA- 688
consensus_681#1      CAAAACGGATTCGCCTTCGTTAAGTAGTTCGGCTTCCTCCCGGAAC 679
                      * **   *   * **      *   **   * * *  *   ***