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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6868#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1019 fasta sequence
[CACCAAGAACTGTTGGCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGT-ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGGTACTT-CTGCGCAAGCT-CGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG]
[-] EMBL CNS09BYA [CACCAAGAACTGTTGGCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAA CTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGGAACTT TGCGCAAGCT CGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCG ]
[+] EMBL CNS09BY9 [ cgCATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAACCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAG TCGTAACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGG ACTTGCTGCGCAA CTCCGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG]
[-] EMBL CNS094ZZ [ CGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGAACAGCATCCGGGAGTACTTCGGCACCAAGCAAA CGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCAAATCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGAGCGGACCCGCGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTGCGGGTTGCTTTCGAGGAGCGGGCAACAATACTGCAGGAACTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAACGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACACACAAGATACGCAACGAGTGGACGGTAC T CTGCGCAAGCT CGAGGAGCACCGCCAGCTc ]
[-] EMBL CNS094SQ [ TGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGAGCGGACCCGCGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTGCGGGTTGCTTTCGAGGAGCGGGCAACAATACTGCAGGAACTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAACGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACACACAAGATACGCAACGAGTGGACGGTACT ]
consensusID : consensus_6868#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 726 fasta sequence
[GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGGGGAGGTGC]
[+] EMBL CNS094SP [GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTG ]
[+] EMBL CNS094ZY [ TGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCTTTCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGGGGAGGTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6868#0 -------------------------------------------------CACCAAGAACT 11
consensus_6868#1 GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAA 60
*** *
consensus_6868#0 GTTG-GCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTA 70
consensus_6868#1 ATCATGGCTGCCAAC-ATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTA 119
* * ** * * ******************************************
consensus_6868#0 TCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAA 130
consensus_6868#1 TCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAA 179
********************************************* **************
consensus_6868#0 ACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGA 190
consensus_6868#1 ACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGA 239
************************************************************
consensus_6868#0 CACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGC 250
consensus_6868#1 CACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGC 299
****************************************** *****************
consensus_6868#0 GGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGG 310
consensus_6868#1 GGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGG 359
*************** ********************************************
consensus_6868#0 CGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCAT 370
consensus_6868#1 CGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCAT 419
************************************************************
consensus_6868#0 CCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGC 430
consensus_6868#1 CCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGC 479
************************************************************
consensus_6868#0 GGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCA 490
consensus_6868#1 GGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCA 539
************************************************************
consensus_6868#0 GAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGA 550
consensus_6868#1 GAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGA 599
****************************************** *****************
consensus_6868#0 CACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGA 610
consensus_6868#1 CACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGAC-GA 658
********************************************************* **
consensus_6868#0 ATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGG 670
consensus_6868#1 ATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGG 718
*************************************************** ********
consensus_6868#0 GGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTA 730
consensus_6868#1 GGAGGTGC---------------------------------------------------- 726
********
consensus_6868#0 CGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAAT 790
consensus_6868#1 ------------------------------------------------------------
consensus_6868#0 ACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGTACG 850
consensus_6868#1 ------------------------------------------------------------
consensus_6868#0 CCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTG 910
consensus_6868#1 ------------------------------------------------------------
consensus_6868#0 GACGGTACTTCTGCGCAAGCTCGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTA 970
consensus_6868#1 ------------------------------------------------------------
consensus_6868#0 CTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG 1019
consensus_6868#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||