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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1299 fasta sequence
[CCGCCCACGCGTCCGGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACAAAATGCAAATGCAAATTTACGCAAAACTGCGTGACACCGTACAGAAGCAGTTCACCCCGATGTGTGTACCCCCTACCTTTGACCGGTGAGTCAGTTGACAGCGGTCAGTGAAAACATTTTTTTAGCTGGTGTATTTGGTTAGGTTAAGCGATTAGCGCTACGAAAACTGTTCAACAAGGAGCGGTGAGGTGTATAAGGAAGGCGCGCTGATCGCATATAATAAACCTTGTTCCTAATAATTCCCCTGATTCCCTTTTTGATGATAAAGTTGCATTCTATCCACTGACAATTTTTAAGTAGATGCCCCGCGTCAACTCAATGGCACTATTCTTTTAAACTAAAATTGCGTTACTGAAGTGCGCTTCATAAACTATAGAAAGTGTCAATTTTGTTTTATTGTAAAGCACTAAACTACCGGTCTCCTAGTTAAAAGCCTTCTACTCTCATGATACTTTCTCTCAGCGCAGTAATTAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATAAATAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATACACTTTACATTACTACGACNCNCTTAATGAAAACTAAGTTGAATACGAATTTTGGCGCGTACCAAAATGATGGTTTGTTTGCTCTTCATACAATTGTAGGAAAGAATCTGTATTGCTAAGCTAGTTAAAAGCATTGTAAACATGAAACATTGAAGCAAGGTTGCCACAAACCCTTAGAATTAATTTCAAAAGAAACTTTTTTTTTTAATTTCGTTGAACGATAATTCGTGTCAGAAAGATTAAACCATTAACAAGATAACCGGACTCTAACTAGCTCGGAGTAACGTAGGAACAATATTCAATGTTTTAACCTTACATGACTAACCCGCACCAGAGCT]
[+] EMBL BM615385 [CCGCCCACGCGTCCGGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACAAAATGCAAATGCAAATTTACGCAAAACTGCGTGACACCGTACAGAAGCAGTTCACCCCGATGTGTGTACCCCCTACCTTTGACCGGTGAGTCAGTTGACAGCGGTCAGTGAAAACATTTTTTTAGCTGGTGTATTTGGTTAGGTTAAGCGATTAGCGCTACGAAAACTGTTCAACAAGGAGCGGTGAGGTGTATAAGGAAGGCGCGCTGATCGCATATAATAAACCTT ]
[+] EMBL BX622602 [ ACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACAAAATGCAAATGCAAATTTACGCAAAACTGCGTGACACCGTACAGAAGCAGTTCACCCCGATGTGTGTACCCCCTACCTTTGACCGGTGAGTCAGTTGACAGCGGTCAGTGAAAACATTTTTTTAGCTGGTGTATTTGGTTAGGTTAAGCGATTAGCGCTACGAAAACTGTTCAACAAGGAGCGGTGAGGTGTATAAGGAAGGCGCGCTGATCGCATATAATAAACCTTGTTCCTAATAATTCCCCTGATTCCCTTTTTGATGATAAAGTTGCATTCTATCCACTGACAATTTTTAAGTAGATGCCCCGCGTCAACTCAATGGCACTATTCTTTTAAACTAAAATTGCGTTACTGAAGTGCGCTTCATAAACTATAGAAAGTGTCAATTTTGTTTTATTGTAAAGCACTAAACTACCGGTCTCCTAGTTAAAAGCCTTCTACTCTCATGATACTTTCTCTCAGCGCAGTAATTAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATAAATAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATACACTTTACATTACTACGACNCNCTTAAT ]
[+] EMBL BX609315 [ TTACTGAAGTGCGCTTCATAAACTATAGAAAGTGTCAATTTTGTTTTATTGTAAAGCACTAAACTACCGGTCTCCTAGTTAAAAGCCTTCTACTCTCATGATACTTTCTCTCAGCGCAGTAATTAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATAAATAGTGAGTTTTGATGGCCATGTTTATGGTTTTTGATCTACTTTAAAACATACACTTTACATTACTACGACACACATAATGAAAACTAAGTTGAATACGAATTTTGGCGCGTACCAAAATGATGGTTTGTTTGCTCTTCATACAATTGTAGGAAAGAATCTGTATTGCTAAGCTAGTTAAAAGCATTGTAAACATGAAACATTGAAGCAAGGTTGCCACAAACCCTTAGAATTAATTTCAAAAGAAACTTTTTTTTTTAATTTCGTTGAACGATAATTCGTGTCAGAAAGATTAAACCATTAACAAGATAACCGGACTCTAACTAGCTCGGAGTAACGTAGGAACAATATTCAATGTTTTAACCTTACATGACTAACCCGCACCAGAGCT]
consensusID : consensus_6967#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 916 fasta sequence
[CATTCGGGCTGATGGGTCACGGTAGTGTAGGCACTGCTGCACACGGTGGTTCTGGGGGAATGCTGGATGATGATAGCTCTCGACACTCGATGCGATCGAACTCGCAGCACGGAATTCCCGAAAGTCCCGAAGCAAATAGCAACAGTGAGATGAACTCTATATCGGACAAATCGTCGCATCATCACCATCAGCAACTGCTGCCACAGCAATCAACAGTAGGCCCAACGATCAGTCTTAATCTGAACGTGAATGCCAAAAAGAAAAAGCTTGAAATGAAGGACGTATTCAACAGCCTTGATGACGACACTGAGGAATCCAACGGACCGAAAAAACGAAAACTTGTACCATTGGAGTACGAGGATGGACGGGGTCAAGCGGACACACCGATTGGAACGGCAAACAGCACACCGGCGGGTAGCGCGCCAAAATCATCGAAAAGCAAAAAGGATGACGCATCGAGCCGAGAAACTCAAAAATCGCAGGAAGAGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACCAAATGCAAATGCAAATTACGCAAAACTGCGTGACACCGTACAGAAGCAGNTCACCCCG]
[+] EMBL BX623987 [CATTCGGGCTGATGGGTCACGGTAGTGTAGGCACTGCTGCACACGGTGGTTCTGGGGGAATGCTGGATGATGATAGCTCTCGACACTCGATGCGATCGAACTCGCAGCACGGAATTCCCGAAAGTCCCGAAGCAAATAGCAACAGTGAGATGAACTCTATATCGGACAAATCGTCGCATCATCACCATCAGCAACTGCTGCCACAGCAATCAACAGTAGGCCCAACGATCAGTCTTAATCTGAACGTGAATGCCAAAAAGAAAAAGCTTGAAATGAAGGACGTATTCAACAGCCTTGATGACGACACTGAGGAATCCAACGGACCGAAAAAACGAAAACTTGTACCATTGGAGTACGAGGATGGACGGGGTCAAGCGGACACACCGATTGGAACGGCAAACAGCACACCGGCGGGTAGCGCGCCAAAATCATCGAAAAGCAAAAAGGATGACGCATCGAGCCGAGAAACTCAAAAATCGCAGGAAGAGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTC ]
[+] EMBL BX629246 [ AGTCTTAATCTGAACGTGAATGCCAAAAAGAAAAAGCTTGAAATGAAGGACGTATTCAACAGCCTTGATGACGACACTGAGGAATCCAACGGACCGAAAAAACGAAAACTTGTACCATTGGAGTACGAGGATGGACGGGGTCAAGCGGACACACCGATTGGAACGGCAAACAGCACACCGGCGGGTAGCGCGCCAAAATCATCGAAAAGCAAAAAGGATGACGCATCGAGCCGAGAAACTCAAAAATCGCAGGAAGAGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACCAAATGCAAATGCAAATTACGCAAAACTGCGTGACACCGTACAGAAGCAGNTCACCCCG]
[+] EMBL BX629137 [ ATCTGAACGTGAATGCCAAAAAGAAAAAGCTTGAAATGAAGGACGTATTCAACAGCCTTGATGACGACACTGAGGAATCCAACGGACCGAAAAAACGAAAACTTGTACCATTGGAGTACGAGGATGGACGGGGTCAAGCGGACACACCGATTGGAACGGCAAACAGCACACCGGCGGGTAGCGCGCCAAAATCATCGAAAAGCAAAAAGGATGACGCATCGAGCCGAGAAACTCAAAAATCGCAGGAAGAGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACTGGACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGACTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGTTTGGCGAAGTAGGGACTACCAACGAACACGCGCTAAGGGGCAAAAAGGAACCAAAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6967#0 CCGCCCACGCGTCCGGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACGGA 60
consensus_6967#1 ------------------------------------------------------------
consensus_6967#0 GAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAGAA 120
consensus_6967#1 --------------------------------------------------CATTCGGGCT 10
* *** *
consensus_6967#0 GAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATATAGGTGAACCGGAACCAAC 180
consensus_6967#1 GATG----GGTCACGGT--AGTGTAGGCACTGCTGCACAC---GGTGGTTCTGGGGGAAT 61
** * * ** ** * * * * ** * **** * * **
consensus_6967#0 GCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCC--CAGGGTATACTG 238
consensus_6967#1 GCTGGATGATGATAGCT--CTCGACACTCGATGCGATCGAACTCGCAGCACGGAATTCCC 119
***** *** * ** * * * ** * * **** * ** ** ** *
consensus_6967#0 GACGATGTTCAGATGGTTCTCGACGAGGAAGCGGAGGTTTTCGTTGTGAAAATGTGGCGA 298
consensus_6967#1 GAAAGTCCCGAAGCAAATAGCAACAGTGAGATGAACTCTATATCGGACAAATCGTCGC-A 178
** * * * * ** ** * * * * * *** ** ** *
consensus_6967#0 CTGCTGATCTATGAAGTGGAAGCAAAAAAAGTTGGT--TTGGCGAAGTAGGGACTACCAA 356
consensus_6967#1 TCATCACCATCAGCAACTGCTGCCACAGCAATCAACAGTAGGCCCAACGATCAGTCTTAA 238
* * * * ** * * * * * *** * * * **
consensus_6967#0 CGAACACGCGCTAAGGGGCAAAAAGGAACAAAATGCAAATGCAAATTTACGCAAAA--CT 414
consensus_6967#1 TCTGAACGTG---AATGCCAAAAAGAAAAAGCTTGAAATGAAGGACGTATTCAACAGCCT 295
*** * * * ******* ** * ** ** * ** *** * **
consensus_6967#0 GCGTGACACCGTACAGAAG--CAGTTCACCCCGATGTGTGTACCCCCTACCTTTGACCGG 472
consensus_6967#1 TGATGACGACACTGAGGAATCCAACGGACCGAAAAAACGAAAACTTGTACCATTGG--AG 353
**** * ** * ** *** * * * **** *** *
consensus_6967#0 TGAGTCAGTTGACAGCGGTCAGTGAAAACATTTTTTTAGCTGGTGTATTTGGTTAGGTTA 532
consensus_6967#1 TACGAGGATGGACGGGGTCAAGCGGACACACCGATTGGAACGGCAAACAGCACACCGGCG 413
* * * *** * * ** * * *** ** ** * *
consensus_6967#0 AGCGATTAGCGCTACGAAAACTGTTCAACAAGGAGCGGTGAGGTGTATAA--GGAAGGCG 590
consensus_6967#1 GGTAGC--GCGCCAAAATCATCGAAAAGCAAAAAG-GATGACGCATCGAGCCGAGAAACT 470
* **** * * * * * *** ** * *** * * * * * *
consensus_6967#0 CGCTGATCGCATATAATAAACCT------TGTTCCTAATAATTCCCCTGATTCCCTTTTT 644
consensus_6967#1 CAAAAATCGCAGGAAGAGAAGCGCAAAAATATTAAGAGTATTATCGACAAGATACCAACG 530
* ****** * ** * * ** * ** * * * *
consensus_6967#0 GATGATAAAGTTGCATTCTATCCACTGACAATTTTTAAGTAGATGCCCCGCGTCAACTCA 704
consensus_6967#1 GAGAAGAGCGATCTCTTTAATTATCCGCTCGATTGGAACGAAATCGATAGTACGATCGAG 590
** * * * * ** ** * * ** ** * ** * * *
consensus_6967#0 ATGGCACTATTCTTTTAAACTAAAATTGCGTTACTGAAGTGCGCTTCATAAACTATAGAA 764
consensus_6967#1 AAGAAGATTCGACCATGGATAAATAAAAAGATAATTGAGTATA-TAGGTGAACCGGAACC 649
* * * * * ** * * ** * *** * * *** *
consensus_6967#0 AGTGTCAAT---TTTGTTTTATTGTAAAGCACTAAACTACCGGTCTCCTAGTTAAAAGCC 821
consensus_6967#1 AACGCTGGTGGATTTCATCTGCTCCAAGGTGTTAGCCGGTAGCACTCCCCAGGGTATACT 709
* * * *** * * * ** * ** * * **** * *
consensus_6967#0 TTCTACTCTCATGATACTTTCTCTCAGCGCAGTAATTAGTGAGTTTTGATGGCCATGTTT 881
consensus_6967#1 GGACGATGTTCAGATGGTT---CTCGACG-AGGAAGCGGAGGTTTTCGTTGTGAAAATGT 765
* * *** ** *** ** ** ** * * *** * ** * * *
consensus_6967#0 A-TGGTTTTTGATCTACTTTAAAACATAAATAGTGAGTTTTGATGGCCATGTTTATGGTT 940
consensus_6967#1 GGCGACTGCTGATCTA---TGAAGTGGAAGCAAAAAAAGTTGGT-------TTGGCGAAG 815
* * ******* * ** ** * * *** * ** *
consensus_6967#0 TTTGATCTACTTTAAAACATACACTTTACATTACTACGACNCNCTTAATGAAAAC-TAAG 999
consensus_6967#1 TAGGGACTACC--AACGAACACGCGCTAAGGGGCAAAAAGGAACCAAATGCAAATGCAAA 873
* * **** ** * ** * ** * * * * **** *** **
consensus_6967#0 TTGAATACGAATTTTGGCGCGTACCAAAATGATGGTTTGTTTGCTCTTCATACAATTGTA 1059
consensus_6967#1 TTACGCA-AAACTGCGTGACACCGTACAGAAGCAGNTCACCCCG---------------- 916
** * ** * * * * * * *
consensus_6967#0 GGAAAGAATCTGTATTGCTAAGCTAGTTAAAAGCATTGTAAACATGAAACATTGAAGCAA 1119
consensus_6967#1 ------------------------------------------------------------
consensus_6967#0 GGTTGCCACAAACCCTTAGAATTAATTTCAAAAGAAACTTTTTTTTTTAATTTCGTTGAA 1179
consensus_6967#1 ------------------------------------------------------------
consensus_6967#0 CGATAATTCGTGTCAGAAAGATTAAACCATTAACAAGATAACCGGACTCTAACTAGCTCG 1239
consensus_6967#1 ------------------------------------------------------------
consensus_6967#0 GAGTAACGTAGGAACAATATTCAATGTTTTAACCTTACATGACTAACCCGCACCAGAGCT 1299
consensus_6967#1 ------------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||