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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1046 fasta sequence
[AGGGCACCCGCTCTTCCGTTTTCTGTTTAATTTCTGTTCAGTTTCGCAATTGTTTCCCATCGATTAATTTCCTTCAGCTTCACGCACACGACGGCAGAAAAGGA-TCGTTTAACATCTCCATCACCGACCAGCAGTCCATCCTTGATGTGCTTGTCGAGACGAAGAAAATCCTCGCCGACGGTGGGCAGCATGAATCGATCATCACGCGACTGCCACTGTGCGTAGAAATCTCACTCCAAACGGCCGAAGGTGGTAGCATGATATTGGAGTGCTGGACGCTGAGCATCAGGACGGACCAAACGAACGCACCCCAGCGCGCCAACCAGGTGATCTACAATCGTATGAGCTTGCTGCTCAAGTCGCTACTCTCTGTCACACGTGTTACACCGGCGTACCGCGTATCGCGCATGAAACGGGCCGACTCGTACGACATCTACTACCGCATCTATACAGGCGAGCCCCAGACGAATCAGTTGGGCGATGGTTACAACCAGGTACGCGTCGGACAGTTGTGCACACAAATCGGAACGCTAAACATGGCCGTGGCCTACCGGACGAAGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGATCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACTACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCC-AACAGTGGCCCGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATTGCCACCGGCGCGATACCAGTNNCTGGCGCGGCGACGGTA]
[+] EMBL AGA282970 [AGGGCACCCGCTCTTCCGTTTTCTGTTTAATTTCTGTTCAGTTTCGCAATTGTTTCCCATCGATTAATTTCCTTCAGCTTCACGCACACGACGGCAGAAAAGGA TCGTTTAACATCTCCATCACCGACCAGCAGTCCATCCTTGATGTGCTTGTCGAGACGAAGAAAATCCTCGCCGACGGTGGGCAGCATGAATCGATCATCACGCGACTGCCACTGTGCGTAGAAATCTCACTCCAAACGGCCGAAGGTGGTAGCATGATATTGGAGTGCTGGACGCTGAGCATCAGGACGGACCAAACGAACGCACCCCAGCGCGCCAACCAGGTGATCTACAATCGTATGAGCTTGCTGCTCAAGTCGCTACTCTCTGTCACACGTGTTACACCGGCGTACCGCGTATCGCGCATGAAACGGGCCGACTCGTACGACATCTACTACCGCATCTATACAGGCGAGCCCCAGACGAATCAGTTGGGCGATGGTTACAACCAGGTACGCGTCGGACAGTTGTGCACACAAATCGGAACGCTAAACATGGCCGTGGCCTACCGGACGAAGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGATCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACTACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACG CCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTAT ]
[+] EMBL AGA284772 [ cgtcgacGGATTGGTTTAACATCTCCATCACCGACCAGCAGTCCATCCTTGATGTGCTTGTCGAGACGAAGAAAATCCTCGCCGACGGTGGGCAGCATGAATCGATCATCACGCGACTGCCACTGTGCGTAGAAATCTCACTCCAAACGGCCGAAGGTGGTAGCATGATATTGGAGTGCTGGACGCTGAGCATCAGGACGGACCAAACGAACGCACCCCAGCGCGCCAACCAGGTGATCTACAATCGTATGAGCTTGCTGCTCAAGTCGCTACTCTCTGTCACACGTGTTACACCGGCGTACCGCGTATCGCGCATGAAACGGGCCGACTCGTACGACATCTACTACCGCATCTATACAGGCGAGCCCCAG ]
[-] EMBL AGA281363 [ ATCGCGCATGAAACGGGCCGACTCGTACGACATCTAATACCGCATCTATACAGGCGAGCCCCAGACGAATCAGTTGGGCGATGGTTACAACCAGGTACGCGTCGGACAGTTGTGCACACAAATCGGAACGCTAAACATGGCCGTGGCCTACCGGACGAAGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGATCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACTACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCCTTACAGTGGCCCGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATTGCCACCGGCGCGATACCAGTNNCTGGCGCG ]
[+] EMBL BM645460 [ ccgGATGGTTACAACCAGGTACGCGTCGGACAGTTGTGCACACAAATCGGAACGCTAAACATGGCCGTGGCCTACCGGACGAAGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGATCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACTACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCC AACAGTGGCCCGATGCATTTCCGCCTCTC ]
[-] EMBL AGA283476 [ AGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGATCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACTACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCC AACAGTGGCCCGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATCGCCACCGGCGCGATACCAGTGCCTGGCGCGGCGACGGTA]
consensusID : consensus_7014#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence
[CCGGTGAATTGAACTTAGAGCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCCAACAGTGGCCCGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATCGCCACCGGCGCGATACCAGTGCCTGGCGCGGCGACG]
[+] EMBL BM654371 [CCGGTGAATTGAACTTAGAGCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCATTCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGCCCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGGGCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCAACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCCAACAGTGGCCCGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATCGCCACCGGCGCGATACCAGTGCCTGGCGCGGCGACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7014#0 AGGGCACCCGCTCTTCCGTTTTCTGTTTAATTTCTGTTCAGTTTCGCAATTGTTTCCCAT 60
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 CGATTAATTTCCTTCAGCTTCACGCACACGACGGCAGAAAAGGATCGTTTAACATCTCCA 120
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 TCACCGACCAGCAGTCCATCCTTGATGTGCTTGTCGAGACGAAGAAAATCCTCGCCGACG 180
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 GTGGGCAGCATGAATCGATCATCACGCGACTGCCACTGTGCGTAGAAATCTCACTCCAAA 240
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 CGGCCGAAGGTGGTAGCATGATATTGGAGTGCTGGACGCTGAGCATCAGGACGGACCAAA 300
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 CGAACGCACCCCAGCGCGCCAACCAGGTGATCTACAATCGTATGAGCTTGCTGCTCAAGT 360
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 CGCTACTCTCTGTCACACGTGTTACACCGGCGTACCGCGTATCGCGCATGAAACGGGCCG 420
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 ACTCGTACGACATCTACTACCGCATCTATACAGGCGAGCCCCAGACGAATCAGTTGGGCG 480
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 ATGGTTACAACCAGGTACGCGTCGGACAGTTGTGCACACAAATCGGAACGCTAAACATGG 540
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 CCGTGGCCTACCGGACGAAGATTACGTTCTCGCCAACGCAAACCGGACGCGACAACACGA 600
consensus_7014#1 ------------------------------------------------------------
consensus_7014#0 TCATGCTGAAGAGTGATCACTTCCTGAAGGATATCAGCCCGAAGCACGTACGCTACAACT 660
consensus_7014#1 ---------------------------------------------------CCGGTGAAT 9
* * *
consensus_7014#0 ACAACAAAAAGATCGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCAT 720
consensus_7014#1 TGAACTTAGAG--CGAGAAAAAGGTGATCGATCTGGACAAACCGATGCGCTGCGGTGCAT 67
*** * ** ***********************************************
consensus_7014#0 TCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGC 780
consensus_7014#1 TCGTGGATGCGTCGCGCGTCAAGAAGCCCACCGAGGACGACTACACACTGCCGGAGACGC 127
************************************************************
consensus_7014#0 CCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGG 840
consensus_7014#1 CCCCGTTCAGCTGGCTGCTGCCGAAGCCGCGCGACGAAAGCACCTTCCGCGGTGGCGAGG 187
************************************************************
consensus_7014#0 GCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCA 900
consensus_7014#1 GCTGCGAGGATCGGGTATCGCTCCACTCGCCCACCAACGTGGACGAAAACTGCTCCAGCA 247
************************************************************
consensus_7014#0 ACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCCAACAGTGGCC 960
consensus_7014#1 ACGCGAACAATCTCAACAACAACAACGCCAGCAAAGGCTCGTACGAGTCCAACAGTGGCC 307
************************************************************
consensus_7014#0 CGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATTGCCACCGGCGCGA 1020
consensus_7014#1 CGATGCATTTCCGCCTCTCTCAGTCGCCCAAGAGCGGCGACGCGATCGCCACCGGCGCGA 367
********************************************** *************
consensus_7014#0 TACCAGTNNCTGGCGCGGCGACGGTA 1046
consensus_7014#1 TACCAGTGCCTGGCGCGGCGACG--- 390
******* **************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||