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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7049#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1703 fasta sequence
[CCAACACTGCCAGCGTCTCGAGAAAAGCGGACAAAACGCTGTCAACTATTGTGAAGGCCAAAAACAAAAAGGCAAATGGTTTGCCAGCAGCATGGCGAGCGGAACTGTACGGTACCCGACCTGGATCGGCCCAGGCCAGACTGGAGCAGCTTTGTACCGCCCTGCATCAGGAGGTAGAGGAGCAAAAAAAGGCAAAGGCTGTGACAAGCGTCCCGCGGAAACGTACCGCTCCGAATGGGGACAGCCCTCCAAAGAAAAAGCTAACATTACCATCAACAAGCTTTAAACAGTCTAGCTCTACATCTACTGTTACTCGTGTTGCTACCGTCCCTGAAACTATCCCCGTTGCTGCTGTAACACATGCAGCCACTAAACCTGTCAGTATTGCAACTGGTACTGGGGGAGCTTGTGTTGCAACAAGCACATCTACTGTAGCAGAGAGCAATGAGATGGATGTGAGATGATGTAGAAATGAACAGTCCCGAGCCGGCTGCACTCCTTTCTCCGCCCATACCAGCGAACGATAGTATGGACTGTATGGAGTTTGACTATTCACCAGAACCAAAAAGGGCACAAAACAAATCGGCGAGCGACTCAAAACCATCGACCAACGAACAGCCGAAAAAGGCTGAAAAGCAGAAGGAAACGAACAATGATTCACATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGCTACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGCTTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTGGTGAAATTCCTGCACAAAAATGTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCGTGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGTGCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGTAACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGGGCTGCAATCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCCAATATAAAGATGTAGGAATATGGTAGGAGCTGCTTATTGATTTGGCTGTCCTTGGCCATTTCGCTGTTGAATTATCCTTTTGTGCTGGTACACGTTGTTAATCTATCCGTTCAACATTGAACGTTTGTACATTGAATTTACTATTTTTTGTTTAATCCAGCCAGAGGGAAAAATACAGAATTTGTTGTTACTGTCCTGTTGCAACAAAGAAAATAGGACAACTTCAGCAATAGCTCAGCCACACCTAACTGGTAAATAATTTATTTTCTTTGTTTCTTTGTTTTTTGAATTTTGGAAATGAAAATAATTGCTCAGGAATGAAACAGAATAGCCATAGCAAGAATTATCATAAATATACTTATCTGCTCTTATGGAAGAGTAATTGTAAAATACAGCTAACGGCGAACGTCCTTACTGGATTAAACATGGGCTGCATGAATTTGAAGTCTTTCAGAAAGATTGAATAAACGGAGAATAAACTGTATAATAAAAATGATAAAAAA]
[+] EMBL CNS08PD5 [CCAACACTGCCAGCGTCTCGAGAAAAGCGGACAAAACGCTGTCAACTATTGTGAAGGCCAAAAACAAAAAGGCAAATGGTTTGCCAGCAGCATGGCGAGCGGAACTGTACGGTACCCGACCTGGATCGGCCCAGGCCAGACTGGAGCAGCTTTGTACCGCCCTGCATCAGGAGGTAGAGGAGCAAAAAAAGGCAAAGGCTGTGACAAGCGTCCCGCGGAAACGTACCGCTCCGAATGGGGACAGCCCTCCAAAGAAAAAGCTAACATTACCATCAACAAGCTTTAAACAGTCTAGCTCTACATCTACTGTTACTCGTGTTGCTACCGTCCCTGAAACTATCCCCGTTGCTGCTGTAACACATGCAGCCACTAAACCTGTCAGTATTGCAACTGGTACTGGGGGAGCTTGTGTTGCAACAAGCACATCTACTGTAGCAGAGAGCAATGAGATGGATGTGAGATGATGTAGAAATGAACAGTCCCGAGCCGGCTGCACTCCTTTCTCCGCCCATACCAGCGAACGATAGTATGGACTGTATGGAGTTTGACTATTCACCAGAACCAAAAAGGGCACAAAACAAATCGGCGAGCGACTCAAAACCATCGACCAACGAACAGCCGAAAAAGGCTGAAAAGCAGAAGGAAACGAACAATGATTCACATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGCTACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGCTTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCC ]
[-] EMBL CNS08PD6 [ CACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGCTTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTGGTGAAATTCCTGCACAAAAATGTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCGTGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGTGCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGTAACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGGGCTGCAATCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCCAATATAAAGATGTAGGAATATGGTAGGAGCTGCTTATTGATTTGGCTGTCCTTGGCCATTTCGCTGTTGAATTATCCTTTTGTGCTGGTACACGTTGTTAATCTATCCGTTCAACATTGAACGTTTGTACATTGAATTTACTATTTTTTGTTTAATCCAGCCAGAGGGAAAAATACAGAATTTGTTGTTACTGTCCTGTTGCAACAAAGAAAATAGGACAACTTCAGCAATAGCTCAGCCACACCTAACTGGTAAATAATTTATTTTCTTTGTTTCTTTGTTTTTTGAATTTTGGAAAGGAAAATAATTGCTCAGGAATGAAATAGAATAGCCATAGCAAGAATTATCATAAATATACTTATCTGCTCTTATGGAAGAGTAATTGTAAAATACAGATAACGGCGAACGT ]
[-] EMBL AGA281028 [ ATATTTTGTTTAATCCAGCCAG GGGAAAAATACAGAATTTGTTGTTACTGTCCTGTTGCAACAAAGAAATTAGGACAACTTCAGCAATAGCTCAGCCACACCTAACTGGTAAATAATTTATTTTCTTTGTTTCTTTGTTTTTTGAATTTTGGAAATGAAAATAATTGCTCAGGAATGAAACAGAATAGCCATAGCAAGAATTATCATAAATATACTTATCTGCTCTTATGGAAGAGTAATTGTAAAATACAGCTAACGGCGAACGTCCTTACTGGATTAAACATGGGCTGCATGAATTTGAAGTCTTTCAGAAAGATTGAATAAACGGAGAATAAACTGTATAATAAAAA ]
[-] EMBL AGA281200 [ CTTTGTTTCTTTGTTTTTTGAATTTTGGAAATGAAAATAATTGCTCAGGAATGAAACAGAATAGCCATAGCAAGAATTATCATAAATATACTTATCTGCTCTTATGGAAGAGTAATTGTAAAATACAGCTAACGGCGAACGTCCTTACTGGATTAAACATGGGCTGCATGAATTTGAAGTCTTTCAGAAAGATTGAATAAACGGAGAATAAACTGTATAATAATGTTGATAAAAAA]
consensusID : consensus_7049#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 745 fasta sequence
[AGAATCGCCCGAGGTTGAACAATGATTCACATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGCTACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGCTTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTGGTGAAATTCCTGCACAAAATGCTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCGTGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGTGCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGTAACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGAGCTGCAATCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCCAATATAAAGCATGTAGCGAATATGGTAGAGAGTTCGCAGTAACGATTNGGCATGTCCTTGGGCCACTTTCGCTGCTTCGAACTCATCCTTTTCGTGCTGGTACACGTTGGTTAATCTATCCGTTCAACAATTGAACGGTTGTACACTTGAATTTACTATATTTGGTTNAATCCAGC]
[+] EMBL AL931531 [AGAATCGCCCGAGGTTGAACAATGATTCACATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGCTACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGCTTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTGGTGAAATTCCTGCACAAAATGCTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCGTGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGTGCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGTAACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGAGCTGCAATCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCCAATATAAAGCATGTAGCGAATATGGTAGAGAGTTCGCAGTAACGATTNGGCATGTCCTTGGGCCACTTTCGCTGCTTCGAACTCATCCTTTTCGTGCTGGTACACGTTGGTTAATCTATCCGTTCAACAATTGAACGGTTGTACACTTGAATTTACTATATTTGGTTNAATCCAGC]
[+] EMBL AGA282656 [ ACCGATCGTGATCATACCGTACAAGGTGCTGCACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTGGTGAAATTCCTGCACAAAATGCTGCGCGCCAAAGATGCACGCGTCAAGGGGCAGCACCCGTGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGTGCGCTGCAGGTGCAGACGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGTAACATGCTGACGAAAGCGTTGGTCGCCAACTTTAACTCCTGTACGATGGAGGAGCTGCAATCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7049#0 CCAACACTGCCAGCGTCTCGAGAAAAGCGGACAAAACGCTGTCAACTATTGTGAAGGCCA 60
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 AAAACAAAAAGGCAAATGGTTTGCCAGCAGCATGGCGAGCGGAACTGTACGGTACCCGAC 120
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 CTGGATCGGCCCAGGCCAGACTGGAGCAGCTTTGTACCGCCCTGCATCAGGAGGTAGAGG 180
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 AGCAAAAAAAGGCAAAGGCTGTGACAAGCGTCCCGCGGAAACGTACCGCTCCGAATGGGG 240
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 ACAGCCCTCCAAAGAAAAAGCTAACATTACCATCAACAAGCTTTAAACAGTCTAGCTCTA 300
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 CATCTACTGTTACTCGTGTTGCTACCGTCCCTGAAACTATCCCCGTTGCTGCTGTAACAC 360
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 ATGCAGCCACTAAACCTGTCAGTATTGCAACTGGTACTGGGGGAGCTTGTGTTGCAACAA 420
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 GCACATCTACTGTAGCAGAGAGCAATGAGATGGATGTGAGATGATGTAGAAATGAACAGT 480
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 CCCGAGCCGGCTGCACTCCTTTCTCCGCCCATACCAGCGAACGATAGTATGGACTGTATG 540
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 GAGTTTGACTATTCACCAGAACCAAAAAGGGCACAAAACAAATCGGCGAGCGACTCAAAA 600
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 CCATCGACCAACGAACAGCCGAAAAAGGCTGAAAAGCAGAAGGAAACGAACAATGATTCA 660
consensus_7049#1 -------------------------------AGAATCGCCCGAGGTTGAACAATGATTCA 29
* ** * * *************
consensus_7049#0 CATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGC 720
consensus_7049#1 CATAAAGCATTGTCCGACCTGAAGACCAAATACAAAGAGGGACTGAGTGCGTTTTCTAGC 89
************************************************************
consensus_7049#0 TACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGC 780
consensus_7049#1 TACTTTTACTGCGTAATTGACACCAACATTTTCATCGAGCATTATCAGGACTTTCAGAGC 149
************************************************************
consensus_7049#0 TTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTG 840
consensus_7049#1 TTTCTTTCGAAGAAATACAAAGGACGTCAACCGATCGTGATCATACCGTACAAGGTGCTG 209
************************************************************
consensus_7049#0 CACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTG 900
consensus_7049#1 CACGAGCTGGACACGGTGAAGCACAAAAAGCCGCAGCTAGCCTCGAAGATTGTGCCGGTG 269
************************************************************
consensus_7049#0 GTGAAATTCCTGCACAAAAATGTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCG 960
consensus_7049#1 GTGAAATTCCTGCACAAAATGCTGCGCGCCAAAGATGCACGCGTCAAGGGCCAGCACCCG 329
******************* **************************************
consensus_7049#0 TGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGT 1020
consensus_7049#1 TGGGACGATACAATCGAGCTGATGCCATTGCTGTCGCCGGATGATTCCATCGTAAACTGT 389
************************************************************
consensus_7049#0 GCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGT 1080
consensus_7049#1 GCGCTGCAGGTGCAGGCGGTTGCCGGTGACGCACAGGTTGTGCTGGTATCGAACGATTGT 449
************************************************************
consensus_7049#0 AACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGGGCTGCAA 1140
consensus_7049#1 AACATGCTGACGAAAGCGTTGGTCGCAAACTTGAACTCCTGTACGATGGAGGAGCTGCAA 509
**************************************************** *******
consensus_7049#0 TCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCC 1200
consensus_7049#1 TCGGATTACAATTTCTAGAAACCCCTTCGACTTAGATAGGTAGTCGTTTCAGTGCCTTCC 569
************************************************************
consensus_7049#0 AATATAAAG-ATGTAG-GAATATGGTAGGAGCTGCTTATT---GATTTGGC-TGTCCTTG 1254
consensus_7049#1 AATATAAAGCATGTAGCGAATATGGTAGAGAGTTCGCAGTAACGATTNGGCATGTCCTTG 629
********* ****** *********** * * * * **** *** ********
consensus_7049#0 G-CCA-TTTCGCTGTT---GAATTATCCTTTT-GTGCTGGTACACGTTG-TTAATCTATC 1307
consensus_7049#1 GGCCACTTTCGCTGCTTCGAACTCATCCTTTTCGTGCTGGTACACGTTGGTTAATCTATC 689
* *** ******** * * * ******** **************** **********
consensus_7049#0 CGTTCAACA-TTGAACGTTTGTACA-TTGAATTTACTATTTTTTGTTTAATCCAGCCAGA 1365
consensus_7049#1 CGTTCAACAATTGAACGGTTGTACACTTGAATTTACTATATTTGGTTNAATCCAGC---- 745
********* ******* ******* ************* *** *** ********
consensus_7049#0 GGGAAAAATACAGAATTTGTTGTTACTGTCCTGTTGCAACAAAGAAAATAGGACAACTTC 1425
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 AGCAATAGCTCAGCCACACCTAACTGGTAAATAATTTATTTTCTTTGTTTCTTTGTTTTT 1485
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 TGAATTTTGGAAATGAAAATAATTGCTCAGGAATGAAACAGAATAGCCATAGCAAGAATT 1545
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 ATCATAAATATACTTATCTGCTCTTATGGAAGAGTAATTGTAAAATACAGCTAACGGCGA 1605
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 ACGTCCTTACTGGATTAAACATGGGCTGCATGAATTTGAAGTCTTTCAGAAAGATTGAAT 1665
consensus_7049#1 ------------------------------------------------------------
consensus_7049#0 AAACGGAGAATAAACTGTATAATAAAAATGATAAAAAA 1703
consensus_7049#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||