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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7095#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1179 fasta sequence
[TAGGGAGCTCACAGCGCTTCCCGGTTCGCCCATCCTTTTTTAACATACGCTCCGGTTTTTGTTTTTTAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCCCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACC-AACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGATCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTTGCACCATAAACGGTTAAAAGAACGGTCTTCACGACGGCCCCTGTTGTTGTTGTTGTTGTTGCTGCTACCTTGCTCTGCTCGCTCGTCGATAATTTCTCTGCCGGGTGGCCATGCTAAACCAGTGCAGAATGTAAGGGCAACAAAGCATTAGGAGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGCGAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGATCACAGCGGAAAAGAAGCGCGGGGGAATATAGTTGTAAATTGTT-GTACATTGTTCGTGCTACGCAAAATTCGTTCTCGTGTTGCGTGTGTTGGCTTGTACACCATCGTTGTGATATTACTGCTACTAC--TATAGTAATTTAAATGGCTTTCCTTCTTTTTTATCTTTATCCATCGCACTCCTGCTCTGTATACCTTAGTGTTGCGGATTTGTTTTTGCTTTCCATAACTGATTGCACGATTAAAACAGTGTGTGAGTGTTTAAAGGTAGAACGGGGTAAACCATGTGGTCGCTTGTGTGAGATAGAGATTGAGAAAATGGGGTTGCGTGTTTTGTTTTCTTCTATCTTTCGTTTGGATAAATGCGGCAACTGACGGTAACAAAATCGGAAAGCAAATTAGAATAAACACATTGAAGCCGAGCTGAGCTCTGCAGCAGCACGTTAAATGGTGTACATTAGTGTTGAGATGTACATGTACAATAAA]
[+] EMBL CNS09IGJ [TAGGGAGCTCACAGCGCTTCCCGGTTCGCCCATCCTTTTTTAACATACGCTCCGGTTTTTGTTTTTTAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCCCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACC AACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGATCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTTGCACCATAAACGGTTAAAAGAACGGTCTTCACGACGGCCCCTGTTGTTGTTGTTGTTGTTGCTGCTACCTTGCTCTGCTCGCTCGTCGATAATTTCTCTGCCGGGTGGCCATGCTAAACCAGTGCAGAATGTAAGGGCAACAAAGCATTAGGAGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGCGAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGATCACAGCGGAAAAGAAGCGCGGGGGAATATAGTTGTAAATTGTT GTACATTGTTCGTGCTACGCAAAATTCGTTCTCGTGTTGCGTGTGTTGGCTTGTACACCATCGTTGTGATATTACTGCTACTAC TATAGTAATTTAAATGGCTTTCCTTCTTTTTTATCTTTATCCATCGCACTCCTGCTCTGTATACCTTAGTGTTGCGGATTTGTTTTTGCTTTCCATAACTGATTGCACGATTAAAACAGTGTGTGAGAAAAAAAAGGTAGAACGGGGTAAACCATGTGGTCGCTTGTGTGA ]
[+] EMBL CNS09O2N [ TCACAGCGCTTCCCGGTTCGCACATCCTTTTTTAACATACGCTCCGGTTTTTGTTTTTTAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCCCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACC AACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGATCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTTGCACCATAAACGGTTAAAAGAACGGTCTTCACGACGGCCCCTGTTGTTGTTGTTGTTGTTGCTGCTACCTTGCTCTGCTCGCTCGTCGATAATTTCTCTGCCGGGTGGCCATGCTAAACCAGTGCAGAATGTAAGGGCAACAAAGCATTAGGAGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGCGAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGATCACAGCGGAAAAGAAGCGCGGGGGAATATAGTTGTAAATTGTTAGTACAaagt ]
[-] EMBL CNS09IGK [ GCGAGTACACCAAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGATCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTTGCACCATAAACGGTTAAAAGAACGGTCTTCACGACGGCCCCTGTTGTTGTTGTTGTTGTTGCTGCTACCTTGCTCTGCTCGCTCGTCGATAATTTCTCTGCCGGGTGGCCATGCTAAACCAGTGCAGAATGTAAGGGCAACAAAGCATTAGGAGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGCGAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGATCACAGCGGAAAAGAAGCGCGGGGGAATATAGTTGTAAATTGTT GTACATTGTTCGTG TACGCAAAATTCGTTCTCGTGTTGCGTGTGTTGGCTTGTACACCATCGTTGTGATATTACTGCTACTAC TATAGTAATTTAAATGGCTTTCCTTCTTTTTTATCTTTATCCATCGCACTCCTGCTCTGTATACCTTAGTGTTGCGGATTTGTTTTTGCTTTCCATAACTGATTGCACGATTAAAACAGTGTGTGAGTGTTTAAAGGTAGAACGGGGTAAACCATGTGGTCGCTTGTGTGAGATAGAGATTGAGAAAATGGGGTTGCGTGTTTTGTTTTCTTCTATCTTTCGTTTGGATAAATGCGGCAACTGACGGTAACAAAATCGGAAAGCAAATTAGAATAAACACATTGAAGCCGAGCTGAGCTCTGCAGCAGCACGTTAAATGGTGTACATTAGTGTTGAGATGTACATGTACAATAAA]
[+] EMBL BM641029 [ CCGTGCTAAAACAGTGCAGAATGTAAGGGCAACAAAGCATTAGGCGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGCGAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGAACACAGCGGAAAAGAAGCGCGGGGGAATATAGTTGTAAATTGTT GTACATTGTTCGTGCTACGCAAAATTCGTTCTCGTGTTGCGTGTGTTGGCTTGTACACCATCGTTGTGATATTACTGCTACTACTATATAGTAATTTAAATGGCTTTCCTTCTTTTTTATCTCCATCCATCGCACTCCTGCTCTGTATACCTTAGTGTTGCGGATTTGTTTTTGCTTTCCATAACTGATTGCACGATTAAAACAGTGTGTGAGTGTTTAAAGGT ]
consensusID : consensus_7095#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 479 fasta sequence
[ATCGCCGAGGTNNATCGGGCGGACGGGCACGTTTATCGTGATCGATATGA-TTTGGATCAGATTCTGCGTCAAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCGCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACCAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGACCCCA-CCAAAA-CCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTGACAAAACGGT]
[+] EMBL AL931936 [ATCGCCGAGGTNNATCGGGCGGACGGGCACGTTTATCGTGATCGATATGA TTTGGATCAGATTCTGCGTCAAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCGCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACCAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGACCCCA CCAAAA CCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTGACAAAACGGT]
[+] EMBL BX618948 [ CGGGCACGTTTATCGTGATCGATATGATTTTGGATCAGATTCTGCGTCAAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCGCTCGCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGTCCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGTGGGCCGCGAGTACACCAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTTAAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCTTCTACGTACCTCCGCCTGACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCCATCCGACCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7095#0 ---TAGGGAGCTCACAGCGCTTCCCGGTTCGCCCATCCTTTTT--TAACATACGCTCCGG 55
consensus_7095#1 ATCGCCGAGGTNNATCGGGCGGACGGGCACGTTTATCGTGATCGATATGATTTGGATCAG 60
* * * * ** * ** ** *** * * ** ** * * *
consensus_7095#0 TTTTTGTTTTTTAGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCG 115
consensus_7095#1 ATTCTGCGTCA-AGGTCACGAGTGTGAGATTGACATTCAGCGGACAATTCAGATGGTGCG 119
** ** * ************************************************
consensus_7095#0 CTCCCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGT 175
consensus_7095#1 CTCGCAGCGTTCCGGCATGGTGCAGACGGAAGCTCAATACAAGTTCGTCTACTTCGCCGT 179
*** ********************************************************
consensus_7095#0 CCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGT 235
consensus_7095#1 CCAGCACTACATCCAGACGCTGCTGCAGCGGAAGCAGGCCGAGCAGCAGAGCCTGCAGGT 239
************************************************************
consensus_7095#0 GGGCCGCGAGTACACCAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTT 295
consensus_7095#1 GGGCCGCGAGTACACCAACATTAAGTACGTCGACGAAATCTATGTCTAAAGTAACTGTTT 299
************************************************************
consensus_7095#0 AAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCCCTTCTACGTACCTCCGCCT 355
consensus_7095#1 AAGCGCTTTCGAAACTAACTTAGCGTTACGCTGTCCCCCCC-TTCTACGTACCTCCGCCT 358
***************************************** ******************
consensus_7095#0 GACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCC 415
consensus_7095#1 GACCCACGTCTGTCCGTCTGTGTAGCCGTAACCTAGAGCGCGTGTGTTTGCATATCCCCC 418
************************************************************
consensus_7095#0 ATCCGATCCCACCCAAAACCCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTTGCACCAT 475
consensus_7095#1 ATCCGACCCCACC--AAAACCCTCCCTCCCTGAAAGAACGAGCTTCTACGTTGACA---- 472
****** ****** *** ********************************* **
consensus_7095#0 AAACGGTTAAAAGAACGGTCTTCACGACGGCCCCTGTTGTTGTTGTTGTTGTTGCTGCTA 535
consensus_7095#1 AAACGGT----------------------------------------------------- 479
*******
consensus_7095#0 CCTTGCTCTGCTCGCTCGTCGATAATTTCTCTGCCGGGTGGCCATGCTAAACCAGTGCAG 595
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 AATGTAAGGGCAACAAAGCATTAGGAGACCAGGGAAAGGGATCAAGGGATCAGCTGGAGC 655
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 GAACGGCATGACGCATAGGGAACGACCAGATCGCGGCCAGATCACAGCGGAAAAGAAGCG 715
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 CGGGGGAATATAGTTGTAAATTGTTGTACATTGTTCGTGCTACGCAAAATTCGTTCTCGT 775
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 GTTGCGTGTGTTGGCTTGTACACCATCGTTGTGATATTACTGCTACTACTATAGTAATTT 835
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 AAATGGCTTTCCTTCTTTTTTATCTTTATCCATCGCACTCCTGCTCTGTATACCTTAGTG 895
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 TTGCGGATTTGTTTTTGCTTTCCATAACTGATTGCACGATTAAAACAGTGTGTGAGTGTT 955
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 TAAAGGTAGAACGGGGTAAACCATGTGGTCGCTTGTGTGAGATAGAGATTGAGAAAATGG 1015
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 GGTTGCGTGTTTTGTTTTCTTCTATCTTTCGTTTGGATAAATGCGGCAACTGACGGTAAC 1075
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 AAAATCGGAAAGCAAATTAGAATAAACACATTGAAGCCGAGCTGAGCTCTGCAGCAGCAC 1135
consensus_7095#1 ------------------------------------------------------------
consensus_7095#0 GTTAAATGGTGTACATTAGTGTTGAGATGTACATGTACAATAAA 1179
consensus_7095#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||