cluster # 7137

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7137 cluster # 7137 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7137#0 length = 904 sequences # 5

consensus_7137#1 length = 185 sequences # 1

consensusID : consensus_7137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 904
fasta sequence

                              [CCGCGGACGCGTGGGTTCGAGAGAGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCCGATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAGGCAGGGCCACCGCACAAGAGCCCCTCGAAAAACACGAAAAAGGGAGACCACAACAAGGACGTGGGCGAGCATGACATCTTCGGCGAGGAAGTGTCCGACTCGGACGAGGAGGATAATCCGATCAACAAAAACATCGATCTGGACGAAACGAGCCGACTGTCGGCAGAAGCCGAANACAGTCGGCTGTCNGATTCCTGCTCCTACCAGGGAACGCAACAGGAGCGCGACAGGAACCCGGCACTGG]

[+] EMBL BM635542             [CCGCGGACGCGTGGGTTCGAGAGAGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCCGATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAGGCAGGGCCACCGCACAAGAGCCCCTCGAAAAACACGA                                                                                                                                                                                                               ]
[+] EMBL BM586327             [               ccgGAGAGAGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCCGATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGTTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAA                                                                                                                                                                                                                                                        ]
[+] EMBL BM590910             [                      ccGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCCGATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAGGCAGGGC                                                                                                                                                                                                                                             ]
[+] EMBL BX622682             [                                                                               ATAGTAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTATGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACACTCAAGAAAAAGTACGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAGGCAGGGGCACCGCACAAGAGCCCCTCGAAAAACACGAAAAAGGGAGACCACAACAAGGACGTGGGCGAGCATGACATCTTCGGCGAGGAAGTGTCCGACTCGGACGAGGAGGATAATCCGATCAACAAAAACATCGATCTGGACGAAACGAGCCGACTGTCGGCAGAAGCCGAANACAGTCGGCTGTCNGATTCCTGCTCCTACCAGGGAACGCAACAGGAGCGCGACAGGAACCCGGCACTGG]
[+] EMBL BX624995             [                                                                                    AAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATCATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCCAACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAGGCAGGGCCACCGCACAAGAGCCCCTCGAAAAACACGAAAAAGGGAGACCACAACAAGGACGTGGGCGAGCATGACATCTTCGGCGAGGAAGTGTCCGACTCGGACGAGGAGGATAATCCGATCAACAAAAACATTGATCTGGACGAAACGAGCCGAC                                                                                       ]




>consensus_7137#0
CCGCGGACGCGTGGGTTCGAGAGAGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCC
GATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATC
ATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCC
AACAACCTGAAGGATCGGCTCTTCATTCGGCTGGAAAATGAGCTGCGCTATGGCGAGGTT
CGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAGTCG
TTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATGATT
TGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAAAAG
AAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCGTGC
AAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCACCG
GAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTGAAG
TGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAACGAG
GCAGGGCCACCGCACAAGAGCCCCTCGAAAAACACGAAAAAGGGAGACCACAACAAGGAC
GTGGGCGAGCATGACATCTTCGGCGAGGAAGTGTCCGACTCGGACGAGGAGGATAATCCG
ATCAACAAAAACATCGATCTGGACGAAACGAGCCGACTGTCGGCAGAAGCCGAANACAGT
CGGCTGTCNGATTCCTGCTCCTACCAGGGAACGCAACAGGAGCGCGACAGGAACCCGGCA
CTGG

consensusID : consensus_7137#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 185
fasta sequence

                              [AACGCAACAGGAGCGCGACAGGAACCCGGCACTGGAGTTCAACAAGAGCATGTTCAGTGGAGCCGGTTCCAGTAGCGGATATAGGGCGGCCCGGCGACCTGACACAGGGGCGAGCAGTGCGGGCGGATCGAAGTCGATGTCATTCTTCCAGGGAGATAATAGTTCGCGTTTGGTTTCCGACAACG]

[+] EMBL CNS099PU             [AACGCAACAGGAGCGCGACAGGAACCCGGCACTGGAGTTCAACAAGAGCATGTTCAGTGGAGCCGGTTCCAGTAGCGGATATAGGGCGGCCCGGCGACCTGACACAGGGGCGAGCAGTGCGGGCGGATCGAAGTCGATGTCATTCTTCCAGGGAGATAATAGTTCGCGTTTGGTTTCCGACAACG]




>consensus_7137#1
AACGCAACAGGAGCGCGACAGGAACCCGGCACTGGAGTTCAACAAGAGCATGTTCAGTGG
AGCCGGTTCCAGTAGCGGATATAGGGCGGCCCGGCGACCTGACACAGGGGCGAGCAGTGC
GGGCGGATCGAAGTCGATGTCATTCTTCCAGGGAGATAATAGTTCGCGTTTGGTTTCCGA
CAACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7137#0      CCGCGGACGCGTGGGTTCGAGAGAGCTCACGAACGCAGCAACAAGCTTAGAAAAATGCCC 60
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      GATAAACCCGTAAAACAGGATAGCAAAAAGGACGATGGAGCGGAGCTGGAAACGCAGATC 120
consensus_7137#1      -------------------AACGCAACAGGAGCG-CGACAGGAACCCGGCACTGGAGTTC 40
                                         *  **** * *  **  *    * * * ** *  * ** **

consensus_7137#0      ATCATGCGAATGCCGAAGGAACCTGCTGCGGCGTTGCGCGAAGCGATACAAAGTGGAGCC 180
consensus_7137#1      AACAAGAGCATGTTCAGTGGAGCCG-------GTTCCAGTAGCGGATATAGGGCGGC-CC 92
                      * ** * * ***   *  * * * *       *** *   *   **** *  * **  **

consensus_7137#0      AACAACCTGAAGGATCGGCTCTTCATTCGGCTGGA---AAATGAGCTGCGCTATGGCGAG 237
consensus_7137#1      GGCGACCTGACACAGGGGCGAGCAGTGCGGGCGGATCGAAGTCGATGTCATTCTTCCAGG 152
                        * ******   *  ***      * ***  ***   ** *      *  * *  *  *

consensus_7137#0      GTTCGATTTGACCATTGGTTGCTTCACGCGAAGGTGGTCGATCTTCCCACGATCATTGAG 297
consensus_7137#1      GAGATAATAGTTCGC-GTTTGGTTTCCGACAACG-------------------------- 185
                      *    * * *  *   * *** **  **  ** *                          

consensus_7137#0      TCGTTAAAAACGATCGACTCGAAAAATTTCTACAAAACAGCGGACATATGTCAGATGATG 357
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      ATTTGCAAGGAGGAACCCGAACAGCAATCGGCTGAAGAGGAATCACCCAACAAGAACAAA 417
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      AAGAAGGACCCGAACAAGGTGGACAAGAAGTTCCTGTGGCCGCACGGCGTGACGCCGCCG 477
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      TGCAAAAACATACGCAAGCGCCGTTTTCGCAAAACGCTCAAGAAAAAGTATGTCGAAGCA 537
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      CCGGAAATCGAGAAAGAAGTGAAGCGTTTGCTGCGCGTCGACAACGAGGCGGTCAACGTG 597
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      AAGTGGGAACTGATCACCGAGGACGAGGATCCGAACAAACCGTCGCCGGGTTCGGGTAAC 657
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      GAGGCAGGGCCACCGCACAAGAGCCCCTCGAAAAACACGAAAAAGGGAGACCACAACAAG 717
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      GACGTGGGCGAGCATGACATCTTCGGCGAGGAAGTGTCCGACTCGGACGAGGAGGATAAT 777
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      CCGATCAACAAAAACATCGATCTGGACGAAACGAGCCGACTGTCGGCAGAAGCCGAANAC 837
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      AGTCGGCTGTCNGATTCCTGCTCCTACCAGGGAACGCAACAGGAGCGCGACAGGAACCCG 897
consensus_7137#1      ------------------------------------------------------------
                                                                                  

consensus_7137#0      GCACTGG 904
consensus_7137#1      -------