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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7164#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1554 fasta sequence
[CCGCGATTAGTGAGTGATTCAGTAACTGATCAGTGTGTAACGAGAGAGCATCAGATAGCGCAACGCAGTTCCTTAAGCGGTTTCTTCACAATAAAACCAATAAAAGTTTAATTTCCAAATCAAATCGGCACCATTTCAATTTTTTCCTCTTCTGCTGAATATTCAAGATTGGGAGGGTTAGTATGTTGAACCTAGAAATGAATGGTACGCGCTGCTTTGTTGTTAAGATCTTTTTGGGACTTTTCGTGCTGGGAGTAGCTGGCACAGAGTTTGAGAAAGTCTTCGAATGGAAACAGATATCCTACACGAATCTGCCGGATCGGAGCAAAGGTTCTACCGACAATGAAACATTTCAGGCGTACAACAACGTCCCCATGGGTGCGACGCATCACAAAAACCGCCTGTTCATCACCATTCCTCGCCGAAGGCCCGGCATTCTGGCCACACTGAATGTGATCGATATGACGAAGGTGTCGCGAGGTGATCGTAGTCCACCGTTCCAAGCCTACCCCTCCTATTCGATCAACGAACTGCAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATAC-GGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACACGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGGAAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCCACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACGATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGANGTTCGAGTGGGACGATGGAGTGTTTTCGATAGCGCTCGGACAGAACGATACGCTGGCCAGTGGGAAGATGGTGTACTACCA-TCCAATGGTTAGTACGACCGAGTTCGGGACGTTTACGAACGTGCTGCGAAGCAAATGGATTGCACTGTCGGGAAATTACGCCAGTCTGTTCGAGCCGTTGGGTGACCGCGGTCCGAATACGCAATCCACGATGCACCATTACGATGCACGTACCGGGGTACTGTTCTATGCGGAGATAAACCGGAACTCTATTGGCTGCTGGAACACGCGGCAAGTCTGCGAGGCCGGGAATCACGCGGTTGTGCATCTGGACAATCGAGAGCTGATCTATCCGTCCGACCTGACCAGCGACTCCGACGGCGTGCTGTGGGTGTTGACTAATAATTTGCCCGTGTGGATTTACGGGCGGTTGAACGAGAGTGACTACAATTTTCGCATATGGCGCCAGGATCCGGCCGTCGCCATCCGGGGTACAAAGTGTGACAATGTAGCTTAGAAGCTGTTTGGACCGATGAGACATCTATGACCGTACATATTGGTTTCAGGGGATTAAAAACTATTTTTTCCAAAGATAAAGTTAATACATTTACATGAATTGC]
[+] EMBL BM651493 [CCGCGATTAGTGAGTGATTCAGTAACTGATCAGTGTGTAACGAGAGAGCATCAGATAGCGCAACGCAGTTCCTTAAGCGGTTTCTTCACAATAAAACCAATAAAAGTTTAATTTCCAAATCAAATCGGCACCATTTCAATTTTTTCCTCTTCTGCTGAATATTCAAGATTGGGAGGGTTAGTATGTTGAACCTAGAAATGAATGGTACGCGCTGCTTTGTTGTTAAGATCTTTTTGGGACTTTTCGTGCTGGGAGTAGCTGGCACAGAGTTTGAGAAAGTCTTCGAATGGAAACAGATATCCTACACGAATCTGCCGGATCGGAGCAAAGGTTCTACCGACAATGAAACATTTCAGGCGTACAACAACGTCCCCATGGGTGCGACGCATCACAAAAACCGCCTGTTCATCACCATTCCTCGCCGAAGGCCCGGCATTCTGGCCACACTGAATGTGATCGATATGACGAAGGTGTCGCGAGGTGATCGTAGTCCACCGTTCCAAGCCTACCCCTCCTATTCGATCAACGAACTGCAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATACGGGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAG ]
[+] EMBL BX626981 [ ATCCTACACGAATCTGCCGGATCGGAGCAAAGGTTCTACCGACAATGAAACATTTCAGGCGTACAACAACGTCCCCATGGGTGCGACGCATCACAAAAACCGCCTGTTCATCACCATTCCTCGCCGAAGGCCCGGCATTCTGGCCACACTGAATGTGATCGATATGACGAAGGTGTCGCGAGGTGATCGTAGTCCACCGTTCCAAGCCTACCCCTCCTATTCGATCAACGAACTGCAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATAC GGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACACGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGGAAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCCACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACGATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGANGTTCGAGTGGGACGATGGAGTGTTTTCGATAGCGCTCGGACAGAACGATACGCTGGGCAGTGGGAAGATGGTGTACTACCATTCCAATGGGTAGTACGACCGA ]
[+] EMBL BX606309 [ CTACCCCTCCTATTCGATCAACGAACTGCAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACGAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATAC GGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAGCGGCCCCAGATCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACACGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGGAAGCGACGGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAACGCGATCCACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACGATCCTACCCGTGCCGCGTTGAACGTGGCCGGCCAGAGGTTCGAGTGGGACGATGGAGTGTTTTCGATAGCGCTCGGACAAAACGATACGCTGGCCAGTGGGAAGATGGTGTACTACCA TCCAATGATTAGTACGACCGAGTTCGGGACGTTTACGAACGTGCTGCGAAGCAAATGGATTGCACTGTCGGGAAATTACGCCAGTCTGTTCGAGCCGTTGGGTGACCGCGGTCCGAATACGCAATCCACGATGCACCATTACGATGCGCGTACCGGGGTACTGTTCTATGCGGAG ]
[+] EMBL BM631847 [ ccgCGATGGAGTGTTTTCGATAGCGCTCGGACAGAACGATACGCTGGCCAGTGGGAAGATGGTGTACTACCA TCCAATGGTTAGTACGACCGAGTTCGGGACGTTTACGAACGTGCTGCGAAGCAAATGGATTGCACTGTCGGGAAATTACGCCAGTCTGTTCGAGCCGTTGGGTGACCGCGGTCCGAATACGCAATCCACGATGCACCATTACGATGCACGTACCGGGGTACTGTTCTATGCGGAGATAAACCGGAACTCTATTGGCTGCTGGAACACGCGGCAAGTCTGCGAGGCCGGGAATCACGCGGTTGTGCATCTGGACAATCGAGAGCTGATCTATCCGTCCGACCTGACCAGCGACTCCGACGGCGTGCTGTGGGTGTTGACTAATAATTTGCCCGTGTGGATTTACGGGCGGTTGAACGAGAGTGACTACAATTTTCGCATATGGCGCCAGGATCCGGCCGTCGCCATCCGGGGTACAAAGTGTGACAATGTAGCTTAGAAGCTGTTTGGACCGATGAGACATCTATGACCGTACATATTGGTTTCAGGGGATTAAAAACTATTTTTTCCAAAGATAAAGTTAATACATTTACATGAATTGC]
[+] EMBL BM619716 [ ccgCGTTGGGTGACCGCGGCCCGAATACGCAATCCACGATGCACCATTACGATGCACGTACCGGGGTACTGTTCTATGCGGAGATAAACCGGAACTCTATTGGCTGCTGGAACACGCGGCAAGTCTGCGAGGCCGGGAATCACGCGGTTGTGCATCTGGACAATCGAGAGCTGATCTATCCGTCCGACCTGACCAGCGACTCCGACGGCGTGCTGTGGGTGTTGACTAATAATTTGCCCGTGTGGATTTACGGGCGGTTGAACGAGAGTGACTACAATTTTCGCATATGGCGCCAGGATCCGGCCGTCGCCATCCGGGGTACAAAGTGTGACAATGTAGCTTAGAAGCTGTTTGGACCGATGAGACATCTATGACCGTACATATTGGTTTCAGGGGATTAAAAACTATTTTTTCCAAAGATAAAGTTAATACATTTACATG ]
consensusID : consensus_7164#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[AATCGGCACGAGGTGTCCTTCACTTTGATCTTACAAGAATGGTACAGTATGTAATTGACATCACTGTGAACACTGTTTTGTAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATACGGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACACGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGGAAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCCACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACGATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGAGGTTCGACGTGGGACGATGGAGTGTNTCNCGATAGCGCTCGGACAGAACGATACGCTGGCCANNTGGGAAGATGGTGTACTACCATCCAATGGTTAT]
[+] EMBL AL934656 [AATCGGCACGAGGTGTCCTTCACTTTGATCTTACAAGAATGGTACAGTATGTAATTGACATCACTGTGAACACTGTTTTGTAGCCACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCTGCGAACGGCTCTGGTTCGTCGATACGGGTATGCTCGAGTATCCCGGTAATCGAATGCAGGTGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACACGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGGAAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCCACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACGATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGAGGTTCGACGTGGGACGATGGAGTGTNTCNCGATAGCGCTCGGACAGAACGATACGCTGGCCANNTGGGAAGATGGTGTACTACCATCCAATGGTTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7164#0 CCGCGATTAGTGAGTGATTCAGTAACTGATCAGTGTGTAACGAGAGAGCATCAGATAGCG 60
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 CAACGCAGTTCCTTAAGCGGTTTCTTCACAATAAAACCAATAAAAGTTTAATTTCCAAAT 120
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 CAAATCGGCACCATTTCAATTTTTTCCTCTTCTGCTGAATATTCAAGATTGGGAGGGTTA 180
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 GTATGTTGAACCTAGAAATGAATGGTACGCGCTGCTTTGTTGTTAAGATCTTTTTGGGAC 240
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 TTTTCGTGCTGGGAGTAGCTGGCACAGAGTTTGAGAAAGTCTTCGAATGGAAACAGATAT 300
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 CCTACACGAATCTGCCGGATCGGAGCAAAGGTTCTACCGACAATGAAACATTTCAGGCGT 360
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 ACAACAACGTCCCCATGGGTGCGACGCATCACAAAAACCGCCTGTTCATCACCATTCCTC 420
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 GCCGAAGGCCCGGCATTCTGGCCACACTGAATGTGATCGATATGACGAAGGTGTCGCGAG 480
consensus_7164#1 ----------------------------------AATCGGCACGAGG--TGTCCTTCACT 24
**** * ** * ** *
consensus_7164#0 GTGATCGTAGTCCACCGTTCCAA-GCCTACCC--CTCCTATTCGATCAACGAACTGCAGC 537
consensus_7164#1 TTGATCTTACAAGAATGGTACAGTATGTAATTGACATCACTGTGAACACTGTTTTGTAGC 84
***** ** * * * ** ** * * * ** ** * ** ***
consensus_7164#0 CACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCT 597
consensus_7164#1 CACAGTACGAGCCCGACCTGCACAAGCTGATCTCGGTGTACCGCACCAGGGTGGATGCCT 144
************************************************************
consensus_7164#0 GCGAACGGCTCTGGTTCGTCGATACGGGTATGCTCGAGTATCCCGGTAATCGAATGCAGG 657
consensus_7164#1 GCGAACGGCTCTGGTTCGTCGATACGGGTATGCTCGAGTATCCCGGTAATCGAATGCAGG 204
************************************************************
consensus_7164#0 TGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACA 717
consensus_7164#1 TGCAGCGGCCCCAGCTCTGGATTATCGATTTGAAGCGCGACCAGCTGGTCCAGCGGTACA 264
************************************************************
consensus_7164#0 CGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGG 777
consensus_7164#1 CGATACCGGCATCGATCGTACGGGAAGGCGTCGGTATGGCCAGCCTCACCGTGGACGTGG 324
************************************************************
consensus_7164#0 AAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCC 837
consensus_7164#1 AAGCGACAGATTGCGATGCAGCTTACGCTTACATCCCGGATCTTGTCGCAAATGCGATCC 384
************************************************************
consensus_7164#0 ACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACG 897
consensus_7164#1 ACGTGTACGGTTTGCGCGAGAACGATATGTGGTCGTTTAACCACAGCTCCTTCGCACACG 444
************************************************************
consensus_7164#0 ATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGANGTTCGA-GTGGGACGATGGAGTG 956
consensus_7164#1 ATCCTACCCGTGCAGCGCTGAACGTTGCCGGCCAGAGGTTCGACGTGGGACGATGGAGTG 504
************************************ ****** ****************
consensus_7164#0 TTT-TCGATAGCGCTCGGACAGAACGATACGCTGGCCAGT-GGGAAGATGGTGTACTACC 1014
consensus_7164#1 TNTCNCGATAGCGCTCGGACAGAACGATACGCTGGCCANNTGGGAAGATGGTGTACTACC 564
* * ********************************* *******************
consensus_7164#0 ATCCAATGGTTAGTACGACCGAGTTCGGGACGTTTACGAACGTGCTGCGAAGCAAATGGA 1074
consensus_7164#1 ATCCAATGGTTAT----------------------------------------------- 577
************
consensus_7164#0 TTGCACTGTCGGGAAATTACGCCAGTCTGTTCGAGCCGTTGGGTGACCGCGGTCCGAATA 1134
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 CGCAATCCACGATGCACCATTACGATGCACGTACCGGGGTACTGTTCTATGCGGAGATAA 1194
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 ACCGGAACTCTATTGGCTGCTGGAACACGCGGCAAGTCTGCGAGGCCGGGAATCACGCGG 1254
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 TTGTGCATCTGGACAATCGAGAGCTGATCTATCCGTCCGACCTGACCAGCGACTCCGACG 1314
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 GCGTGCTGTGGGTGTTGACTAATAATTTGCCCGTGTGGATTTACGGGCGGTTGAACGAGA 1374
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 GTGACTACAATTTTCGCATATGGCGCCAGGATCCGGCCGTCGCCATCCGGGGTACAAAGT 1434
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 GTGACAATGTAGCTTAGAAGCTGTTTGGACCGATGAGACATCTATGACCGTACATATTGG 1494
consensus_7164#1 ------------------------------------------------------------
consensus_7164#0 TTTCAGGGGATTAAAAACTATTTTTTCCAAAGATAAAGTTAATACATTTACATGAATTGC 1554
consensus_7164#1 ------------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||