cluster # 7194

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Anopheles gambiae
cluster # 7194 cluster # 7194 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7194#0 length = 718 sequences # 1

consensus_7194#1 length = 702 sequences # 5

consensusID : consensus_7194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 718
fasta sequence

                              [CGGGGGAGATATCTTTCTACACTCACACGATACGGTTGCATTCCGCTGGAGGGAGGGCAGTGGTAATAAAAATCTTCCCCATTCTGGAAATTGCACGAAAAACTACACGATTCGACAGCTTTATCGTTTAGCTGATGTGTTCATAAGCCCAAGATCTATTAGCAACATCATCAATCGACGAGGGAGCACAAATCAACACACAGAGATAAAAAAAGAAACGGACGTTACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAGTATCTGACGCTGCTGCTGAAGAGTACCCGCACGGAGCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCAGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCACACTGTTTCTTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAG]

[+] EMBL BX615176             [CGGGGGAGATATCTTTCTACACTCACACGATACGGTTGCATTCCGCTGGAGGGAGGGCAGTGGTAATAAAAATCTTCCCCATTCTGGAAATTGCACGAAAAACTACACGATTCGACAGCTTTATCGTTTAGCTGATGTGTTCATAAGCCCAAGATCTATTAGCAACATCATCAATCGACGAGGGAGCACAAATCAACACACAGAGATAAAAAAAGAAACGGACGTTACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAGTATCTGACGCTGCTGCTGAAGAGTACCCGCACGGAGCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCAGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCACACTGTTTCTTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAG]




>consensus_7194#0
CGGGGGAGATATCTTTCTACACTCACACGATACGGTTGCATTCCGCTGGAGGGAGGGCAG
TGGTAATAAAAATCTTCCCCATTCTGGAAATTGCACGAAAAACTACACGATTCGACAGCT
TTATCGTTTAGCTGATGTGTTCATAAGCCCAAGATCTATTAGCAACATCATCAATCGACG
AGGGAGCACAAATCAACACACAGAGATAAAAAAAGAAACGGACGTTACTCCAGGCGCTAT
CTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAGTATCT
GACGCTGCTGCTGAAGAGTACCCGCACGGAGCAGGATGACTCATACCTGCTGCGATACGT
TTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCGG
TGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCAGTACCCGTG
GATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGG
GGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCACACTGTTTCTTGCGGCTTCCTGC
AGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTG
CGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAG

consensusID : consensus_7194#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 702
fasta sequence

                              [CCGGTTCCGTTCAGTACAGTTATTCGCTATCGTTTTGTATCTTGCTCAGCCAGCTCTTGCCTTAGAAACGGACGTCACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAG-TATCTGACGCTGCTGCTAAAGAGTACCCGCAC-GGAGCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGGTTAACGTGTCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATC-AGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGG-CACACTGTTTCGTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAGCGAATTATCATCCACGAAGGTTACACCGGGAATCACGCGGATCGCGAAAATGATATTGCACTGATCGAATTGAGCGGGTCGGCGAAGTACAACGACTTCGTAAAGCCTATCTGCCTGCCCGAGCCGGGCACACC]

[+] EMBL BM632583             [CCGGTTCCGTTCAGTACAGTTATTCGCTATCGTTTTGTATCTTGCTCAGCCAGCTCTTGCCTTAGAAACGGACGTCCCTCCTGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAG TATCTGACGCTGCTGCTAAAGAGTACCCGCAC GGAGCAGGATGACTCATACCTGCTGCGGTACGTTTGCGATCGACGCAAGGGGTTAACGTGTCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATTGTCGGTGGACAGCGCACGTCGATCGATC AGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGG CACACTGTTTCGTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCCTGTGCATCTCCGGTGCAAGACTTTGACTACGAGCGAATCATCATCCACGAAGGCTACACCGGGAATCACGCGGATCGCGAAAATGATATTGCACTGATCGAATTGAGCGGGTC                                                      ]
[+] EMBL BX619810             [        nTTCAGTACAGTTATTCGCTATCGTTTTGTATCTTGCCCAGCAAGCTCTTACCTTAGAAACGGACGTCACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAG TATCTGACGCTGCTGCTAAAGAGTACCCGCAC GGAGCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGGTTAACGTGTCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCGAGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGG CACACTGTTTCGTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAa                                                                                                                                                                             ]
[+] EMBL BX614670             [                                TTTTGTATCTTGCTCAGCCAGCTCTAGCCTTAGAAACGGACGTTACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAG TATCTGACGCTGCTGCTGAAGAGTACCCGCAC GGAGCAGGATGACTCATACCTGCTTCGATACGTTTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATC AGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGG CACACTGTTTCTTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAGCGAATTATCATCCACGAAGGTTACACCGGGAATCACGCGGATCGCGAAAATGATATTGCACTCATCGAATTGAGCGGGTCGGCGAAGTACAACGACTTCGTAAAGCCTATCTGCCTGCCCGAGCCGGGCACACC]
[+] EMBL BX614373             [                                   TGTATCTTGCTCAGCCAGCTCTAGCCTTAGAAACGGACGTTACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAG TATCTGACGCTGCTGCTGAAGAGTACCCGCAC GGAGCAGGATGACTCATACCTGCTTCGATACGTTTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATC AGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGG CACACTGTTTCTTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAGCGAATTATCATCCACGAAGGTTACACCGGGAATCACGCGGATCGCGAAAATGA                                                                                 ]
[+] EMBL BX619303             [                                                                                                                         nTGCACTTCAAGAACGATCCAAAGNTATCTGAC C GCTGCTAAAGAGTACCCGCACGGGAGCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGGTTAACGTGTCGGACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATC AGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCCACACTGTTTCGTGCGGCTTCCTGCAGGTGTTGAGCTACACNNAGTGCGACTGGGCG                                                                                                                                                                                                                            ]




>consensus_7194#1
CCGGTTCCGTTCAGTACAGTTATTCGCTATCGTTTTGTATCTTGCTCAGCCAGCTCTTGC
CTTAGAAACGGACGTCACTCCAGGCGCTATCTGTCGGGTGGAAGGAAATTTCGGACGCTG
TGTGCACTTCAAGAACGATCCAAAGTATCTGACGCTGCTGCTAAAGAGTACCCGCACGGA
GCAGGATGACTCATACCTGCTGCGATACGTTTGCGATCGACGCAAGGGGTTAACGTGTCG
GACTGGCTCGGTGAACGATGAGGTTTGCGGTGTGCAGATGGATAACCGTATCGTCGGTGG
ACAGCGCACGTCGATCGATCAGTACCCGTGGATGGCGTTGCTGCAGTACATCAACCATCG
CAAGGGCACGAAGCGGTTCGCCTGTGGAGGGGCACTGCTGAACCGGAAGTTTGTCCTCTC
GGCGGCACACTGTTTCGTGCGGCTTCCTGCAGGTGTTGAGCTACACAAAGTGCGACTGGG
CGAATGGGACACCGATTCCGAAATTGACTGCGAAGATTTGGATGATGAGCTGTCTTGTGC
ATCTCCGGTGCAAGACTTTGACTACGAGCGAATTATCATCCACGAAGGTTACACCGGGAA
TCACGCGGATCGCGAAAATGATATTGCACTGATCGAATTGAGCGGGTCGGCGAAGTACAA
CGACTTCGTAAAGCCTATCTGCCTGCCCGAGCCGGGCACACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7194#0      CGGGGGAGATATCTTTCTACACTCACACGATACGGTTGCATTCCGCTGGAGGGAGGGCAG 60
consensus_7194#1      ------------------------------------------------------------
                                                                                  

consensus_7194#0      TGGTAATAAAAATCTTCCCCATTCTGGAAATTGCACGAAAAACTACACGATTCGACAGCT 120
consensus_7194#1      ------------------------------------------------------------
                                                                                  

consensus_7194#0      TTATCGTTTAGCTGATGTGTTCATAAGCCCAAGATCTATTAGCAACATCATCAATCGACG 180
consensus_7194#1      -----------------------------CCGGTTCCGTT--CAGTACAGTTATTCGCTA 29
                                                   *  * **  **  **  *   * * ***   

consensus_7194#0      AGGGAGCACAAATCAA-CACACAGAGATAAAAAAAGAAACGGACGTTACTCCAGGCGCTA 239
consensus_7194#1      TCGTTTTGTATCTTGCTCAGCCAGCTCTTGCCTTAGAAACGGACGTCACTCCAGGCGCTA 89
                        *      *  *    **  ***   *      ************ *************

consensus_7194#0      TCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAGTATC 299
consensus_7194#1      TCTGTCGGGTGGAAGGAAATTTCGGACGCTGTGTGCACTTCAAGAACGATCCAAAGTATC 149
                      ************************************************************

consensus_7194#0      TGACGCTGCTGCTGAAGAGTACCCGCACGGAGCAGGATGACTCATACCTGCTGCGATACG 359
consensus_7194#1      TGACGCTGCTGCTAAAGAGTACCCGCACGGAGCAGGATGACTCATACCTGCTGCGATACG 209
                      ************* **********************************************

consensus_7194#0      TTTGCGATCGACGCAAGGGATTAACGTGCCGGACTGGCTCGGTGAACGATGAGGTTTGCG 419
consensus_7194#1      TTTGCGATCGACGCAAGGGGTTAACGTGTCGGACTGGCTCGGTGAACGATGAGGTTTGCG 269
                      ******************* ******** *******************************

consensus_7194#0      GTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCAGTACCCGT 479
consensus_7194#1      GTGTGCAGATGGATAACCGTATCGTCGGTGGACAGCGCACGTCGATCGATCAGTACCCGT 329
                      ************************************************************

consensus_7194#0      GGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAG 539
consensus_7194#1      GGATGGCGTTGCTGCAGTACATCAACCATCGCAAGGGCACGAAGCGGTTCGCCTGTGGAG 389
                      ************************************************************

consensus_7194#0      GGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCACACTGTTTCTTGCGGCTTCCTG 599
consensus_7194#1      GGGCACTGCTGAACCGGAAGTTTGTCCTCTCGGCGGCACACTGTTTCGTGCGGCTTCCTG 449
                      *********************************************** ************

consensus_7194#0      CAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACT 659
consensus_7194#1      CAGGTGTTGAGCTACACAAAGTGCGACTGGGCGAATGGGACACCGATTCCGAAATTGACT 509
                      ************************************************************

consensus_7194#0      GCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAG- 718
consensus_7194#1      GCGAAGATTTGGATGATGAGCTGTCTTGTGCATCTCCGGTGCAAGACTTTGACTACGAGC 569
                      *********************************************************** 

consensus_7194#0      ------------------------------------------------------------
consensus_7194#1      GAATTATCATCCACGAAGGTTACACCGGGAATCACGCGGATCGCGAAAATGATATTGCAC 629
                                                                                  

consensus_7194#0      ------------------------------------------------------------
consensus_7194#1      TGATCGAATTGAGCGGGTCGGCGAAGTACAACGACTTCGTAAAGCCTATCTGCCTGCCCG 689
                                                                                  

consensus_7194#0      -------------
consensus_7194#1      AGCCGGGCACACC 702