cluster # 7203

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Anopheles gambiae
cluster # 7203 cluster # 7203 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7203#0 length = 758 sequences # 3

consensus_7203#1 length = 682 sequences # 2
consensus_7203#2 length = 397 sequences # 1

consensusID : consensus_7203#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 758
fasta sequence

                              [CCGCCCACGCGTCCGGCACGAACGATATCTAT--ATATATACAAATTAATAGATAGTGGAACACACAATACTTAACT--AAAAAAAAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTCTAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTG-AGGCAGCGAAGGATATTGAGCTGCATT-ACAAAACTCTCTCAAACACACATGCAAACACAAAGATTGGGTAACTTATTGAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCACTTTCCAAAGAATCCGCGAAATGTCTACACAAAAACACAGCGTTG----GGGTGTGGGTGTGATATGGTAAATTTTACAAGCCGGAAAAAATGATACGAATTTGCACCGTGTATTTGCACACCTAC---TACTACTACTACTACTACCCGTTTCTTTCCGGTTTATTTTAGATAGCATGTAGAGCATATGTAGTTCGAACGATATCTGCACGTTTTTTCTGCAATACGACGCACGACGCACACAGTGGATAGGCATCATCACCCTATGGAAAGGGTTTACGAAGAGATATATACATAGATAGAGAGAGAGAGAGAGAGAGCAAGAGCACACAGTGACGTGACGTGTAACACGGTGCAACGATAGATTAGCGTTAGAAAGTTTAAAAACATTCACAGAAGCAAAAAATAAGCAAAATCCAACGCGCACCCCCCTTTTTCGGAAACTTTCCTTCCGCAATTTTTCCTTCCTGGTCCTGGATTTGAAATA]

[+] EMBL BM583753             [CCGCCCACGCGTCCGGCACGAACGATATCTAT  ATATATACAAATTAATAGATAGTGGAACACACAATACTTAACT     AAAGAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTCTAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTG AGGCAGCGAAGGATATTGAGCTGCATT ACAAAA  CTCTCAGACACACATGCAAACACAAAGAATGGGTAACTTATTGAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCCCTTTCCAAAGAATCCGCGAAATGTCTACACAAAAACACAGCGTTG    GGGTGTGGGTGTGATATGGTAAATTTTACAAGCCGGAAAAAAGGATACGAATTTGCACCGTGTATTTGCACAC   C   TACTACTACTACTACTACCCGTTTCTTTCCGGTTTATTTTAGATAGTATGTAGAGCTTATGTAGTTCGAACGATATCTGCACGTTTTTTCTGCAATACGACGCACGACGCACACAGTGGATA                                                                                                                                                                                                                                            ]
[+] EMBL BX619769             [                     ACGATATCTATACATATATACAAATTAATAGATAGTGGAACACACAATACTTAACT  AAAAAAAAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTCTAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTGAAGGCAGCGAAGGATATTGAGCTGCATT ACAAAACTCTCCCAAACACACAAGCAAACACAAAGATTGGGTAACTTATTGAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCACTTTCCAAAGAATCCGCGAAATGTCTACACAAAAACACAGCGTT     GGGTGTGGGTGTGATATGGTAAATTTTACAAGCCGGAAAAAATGATACGAATTTGCACCGTGTATTTGCGCACCTAC   TACTACCACTACTACTACCCGTTTCTTTCCGGTTTATTTTAGATAGCATGTAGAGCATAT                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM600841             [                                                      ccgGGAACACACAATACTTAACTAAAAAAAAAAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTCTAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTG AGGCAGCGAAGGATATTGAGCTGCATTGAAAAAACTCTCTCAAACACACATGCAAACACAAAGATTGGGTAACTGATTGAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCACTTTCCAAAGAATCCGCGAAATGTCTACACAAAAACACAGCATTGATGTGTGTGTGGGTGTGATATGGTAAATTTTACAAGCCGGAAAAAATGATACGAATTTGCACCGTGTATTTGCACACCTACTATTACTACTACTACTACTACCCGTTTCTTTCCGGTTTATTTTAGATAGCATGTAGAGCATATGTAGTTCGAACGATATCTGCACGTTTTTTCTGCAATACGACGCACGACGCACACAGTGGATAGGCATCATCACCCTATGGAAAGGGTTTACGAAGAGATATATACATAGATAGAGAGAGAGAGAGAGAGAGCAAGAGCACACAGTGACGTGACGTGTAACACGGTGCAACGATAGATTAGCGTTAGAAAGTTTAAAAACATTCACAGAAGCAAAAAATAAGCAAAATCCAACGCGCACCCCCCTTTTTCGGAAACTTTCCTTCCGCAATTTTTCCTTCCTGGTCCTGGATTTGAAATA]




>consensus_7203#0
CCGCCCACGCGTCCGGCACGAACGATATCTATATATATACAAATTAATAGATAGTGGAAC
ACACAATACTTAACTAAAAAAAAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTC
TAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTGAGGCAGCGAAGGATATT
GAGCTGCATTACAAAACTCTCTCAAACACACATGCAAACACAAAGATTGGGTAACTTATT
GAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCACTTTCCAAAGAATCCGCGAAAT
GTCTACACAAAAACACAGCGTTGGGGTGTGGGTGTGATATGGTAAATTTTACAAGCCGGA
AAAAATGATACGAATTTGCACCGTGTATTTGCACACCTACTACTACTACTACTACTACCC
GTTTCTTTCCGGTTTATTTTAGATAGCATGTAGAGCATATGTAGTTCGAACGATATCTGC
ACGTTTTTTCTGCAATACGACGCACGACGCACACAGTGGATAGGCATCATCACCCTATGG
AAAGGGTTTACGAAGAGATATATACATAGATAGAGAGAGAGAGAGAGAGAGCAAGAGCAC
ACAGTGACGTGACGTGTAACACGGTGCAACGATAGATTAGCGTTAGAAAGTTTAAAAACA
TTCACAGAAGCAAAAAATAAGCAAAATCCAACGCGCACCCCCCTTTTTCGGAAACTTTCC
TTCCGCAATTTTTCCTTCCTGGTCCTGGATTTGAAATA

consensusID : consensus_7203#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 682
fasta sequence

                              [CCGCCCACGCGTCCGGTCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTACAAGAAGTAGAGTGGAACTGGGTGGTGAGAACGGAGAGAATGGGGGGAAGGAAAAGGGAACACGATTACAAACGACAAACGACGCGTGTCGCGAATGGAAAATGTGGAAACACCAATCCTATTAAGGGGGGAAACAAACGAATGTTAGGGATGATAGCCAGTGTTAGGCCGACCCCCCCTATGTTTGTGTGCTGTTCGAGTTTTCCGTTTCAATGTTTCATACTTTTCTCTTTTAAATGTATGAGAGTTTTCGATATAAACAACTAAAATTAGAAAATGCGCTTGAGTTAAAACGAGTTTTGCTTGTTTTTTTTTGGCTCACCACTGTACAGTTCCTTTCGTCTTTGTATGTGAACGTTAGGCAAAGGTCTGGAGAGGCATCTCTCGCATCTGGCTTATATATCGTTAGGGGATAAA---AAATAGTACGACGCAGAGGAGGGGGGAGAAATGCGATGGAGAACTTTTAGCTATGCGCGATTATTGAAAAGTAAGAAACGTTTGTACTCCCGTCCCACGGCGGGATGAGATTGGCGATGAAATGACAAAAAGGATTCGATTCGAATCGGCACGAACGATATCTATATATATATACAAATTAATAGATAGTGGAACACACAATACTT]

[+] EMBL BM612769             [CCGCCCACGCGTCCGGTCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTACAAGAAGTAGAGTGGAACTGGGTGGTGAGAACGGAGAGAATGGGGGGAAGGAAAAGGGAACACGATTACAAACGACAAACGACGCGTGTCGCGAATGGAAAATGTGGAAACACCAATCCTATTAAGGGGGGAAACAAACGAATGTTAGGGATGATAGCCAGTGTTAGGCCGACCCCCCCTATGTTTGTGTGCTGTTCGAGTTTTCCGTTTCAATGTTTCATACTTTTCTCTTTTAAATGTATGAGAGTTTTCGATATAAACAACTAAAATTAGAAAATGCGCTTGAGTTAAAACGAGTTTTGCTTGTTTTTTTTTGGCTCACCACTGTACAGTTCCTTTCGTCTTTGTATGTGAACGTTAGGCAAAGGTCTGGAGAGGCATCTCTCGCATCTGGCTTATATATCGTTAGGGGATAAA   AAATAGTACGACGCAGAGGAGGGGGGAGAAATGCGATGGAGAACTTTTAGCTATGCGCGATTATTGAAAAGTAAGAAACGTTTGTACTCCCGTCCCACGGCGGGATGAGATTGGCGATGAAATGACAAAAAGGATTCGA                                                                   ]
[+] EMBL BM576639             [                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGAGGCATCTCTCGCATCTGGCTTATATATCGTTAGGGGATAAAAAGAAATAGTACGATTCAGAGGAGGGGGGAG   TGCGATGGAGAACTTTTAGCTATGCGCGATTATTGAAAAGTAAGAAACGTTTGTACTCCCGTCCCACGGCGGGATGAGATTGGCGATGAAATGACAAAAAGGATTCGATTCGAATCGGCACGAACGATATCTATATATATATACAAATTAATAGATAGTGGAACACACAATACTT]




>consensus_7203#1
CCGCCCACGCGTCCGGTCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTAC
AAGAAGTAGAGTGGAACTGGGTGGTGAGAACGGAGAGAATGGGGGGAAGGAAAAGGGAAC
ACGATTACAAACGACAAACGACGCGTGTCGCGAATGGAAAATGTGGAAACACCAATCCTA
TTAAGGGGGGAAACAAACGAATGTTAGGGATGATAGCCAGTGTTAGGCCGACCCCCCCTA
TGTTTGTGTGCTGTTCGAGTTTTCCGTTTCAATGTTTCATACTTTTCTCTTTTAAATGTA
TGAGAGTTTTCGATATAAACAACTAAAATTAGAAAATGCGCTTGAGTTAAAACGAGTTTT
GCTTGTTTTTTTTTGGCTCACCACTGTACAGTTCCTTTCGTCTTTGTATGTGAACGTTAG
GCAAAGGTCTGGAGAGGCATCTCTCGCATCTGGCTTATATATCGTTAGGGGATAAAAAAT
AGTACGACGCAGAGGAGGGGGGAGAAATGCGATGGAGAACTTTTAGCTATGCGCGATTAT
TGAAAAGTAAGAAACGTTTGTACTCCCGTCCCACGGCGGGATGAGATTGGCGATGAAATG
ACAAAAAGGATTCGATTCGAATCGGCACGAACGATATCTATATATATATACAAATTAATA
GATAGTGGAACACACAATACTT

consensusID : consensus_7203#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [AGGCAGAATCGGCACGNTGATCGACTGGAACAATACGAGCGACTGGTACAAGGCGATGTACACCGTGATCTGCTGCTTTCCGCACACGTTCAAGGACATGGTGCAGAGCTTCCTGCAGGAGCACGTGGACAGCAGCACGGACAAGGCGAAGGAGATGATCGGCGAAAGCTTGGCGCGCCTGAACCAGATCGAGTTTGCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTACAAGAAGTAGGAGTGGAACTGGGTGGTCAGAACAGCAGAGAATGGGCGGAAGGAACAAGGGAACACGTTTACAAAGCGACAAACGACGCGTGTCGCGAATGGACAAATGTGCAAACACCAAGTCCTACTGAGGGGGGAAACAAAGCGAATGTTAGGGA]

[+] EMBL BX468846             [AGGCAGAATCGGCACGNTGATCGACTGGAACAATACGAGCGACTGGTACAAGGCGATGTACACCGTGATCTGCTGCTTTCCGCACACGTTCAAGGACATGGTGCAGAGCTTCCTGCAGGAGCACGTGGACAGCAGCACGGACAAGGCGAAGGAGATGATCGGCGAAAGCTTGGCGCGCCTGAACCAGATCGAGTTTGCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTACAAGAAGTAGGAGTGGAACTGGGTGGTCAGAACAGCAGAGAATGGGCGGAAGGAACAAGGGAACACGTTTACAAAGCGACAAACGACGCGTGTCGCGAATGGACAAATGTGCAAACACCAAGTCCTACTGAGGGGGGAAACAAAGCGAATGTTAGGGA]




>consensus_7203#2
AGGCAGAATCGGCACGNTGATCGACTGGAACAATACGAGCGACTGGTACAAGGCGATGTA
CACCGTGATCTGCTGCTTTCCGCACACGTTCAAGGACATGGTGCAGAGCTTCCTGCAGGA
GCACGTGGACAGCAGCACGGACAAGGCGAAGGAGATGATCGGCGAAAGCTTGGCGCGCCT
GAACCAGATCGAGTTTGCGACTGGTACGATCGGTTCGTCTCGCTGGTGAGTCTTATGTAC
AAGAAGTAGGAGTGGAACTGGGTGGTCAGAACAGCAGAGAATGGGCGGAAGGAACAAGGG
AACACGTTTACAAAGCGACAAACGACGCGTGTCGCGAATGGACAAATGTGCAAACACCAA
GTCCTACTGAGGGGGGAAACAAAGCGAATGTTAGGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7203#1      CCGCCCACGCGTCCGGT-CGACTGGTACG---ATCGGTTCGTCTCGCTGGTGAGTCTTAT 56
consensus_7203#2      ------------------------------------------------------------
consensus_7203#0      CCGCCCACGCGTCCGGCACGAACGATATCTATATATATACAAATTAATAGATAGTGGAAC 60
                                                                                  

consensus_7203#1      GTACAAGAAGTAGAGTGGAACTGGGTGGTGAGAACGGAGAGAATGGGGGGAAG------- 109
consensus_7203#2      ------------------------------------------------------------
consensus_7203#0      ACACAATACTTAACTAAAAAAAAAACAAAGAAAACAAAGGATATAGCTAGGGGCTTACTC 120
                                                                                  

consensus_7203#1      -----GAAAAGGGAACACGATTACAAACGACAAACGACGCGTGTCGCGAATGGAAAATGT 164
consensus_7203#2      --------------------------------------------------------AGGC 4
consensus_7203#0      TAATTGTACTGGGACTGTGCACACACTGCGGGAAGGACTCTTGAGGC-AGCGAAGGATAT 179
                                                                              *   

consensus_7203#1      GGAAACACC------AATCCTATTAAGGGGGGAAACAAA--CGAATGTTAGGGATGATAG 216
consensus_7203#2      AGAATCGGC------ACGNTGATCGACTGGAACAATA----CGAGCGACTGGTACAA--G 52
consensus_7203#0      TGAGCTGCATTACAAAACTCTCTCAAACACACATGCAAACACAAAGATTGGGTAACTTAT 239
                       **            *      *  *          *    * *      ** *      

consensus_7203#1      CCAGTGTT---AGGCCGACCCCCCCTATGTTTGTGTGC-TGTTCGAGTTTTCCGTTTCAA 272
consensus_7203#2      GCGATGT----ACACCGTGATCTGCTGC-TTTCCGCACACGTTCAAGGAC---------A 98
consensus_7203#0      TGAATGTTTGAGGGACGGATTCGGCGGTGAAATGGATCACTTTCCAAAGAATCCGCGAAA 299
                          ***        **    *  *         *  *   *** *             *

consensus_7203#1      TGT-TTCATACTTTTCTCTTTTAAATGTATGAGAGTTTT-CGATATAAACAACTAAAATT 330
consensus_7203#2      TGG-TGCAGAGCTTCCTGC---AGGAGCACGTGGACAG--CAGCACGGACAAGGCGAAGG 152
consensus_7203#0      TGTCTACACAAAAACACAGCGTTGGGGTGTGGGTGTGATATGGTAAATTTTACAAGCCGG 359
                      **  * ** *                *   * *           *      *        

consensus_7203#1      AGAAAATGCGCTTGAGTTAAAACGAGT-TTTGCTTGTTTTTTTTTGGC-TCACCACTGTA 388
consensus_7203#2      AGATGATCGGCGAAAGCTTGG-CGCGC-CTGAACCAGATCG----AGT-TTGCGACTGGT 205
consensus_7203#0      AAAAAATGATACGAATTTGCACCGTGTATTTGCACACCTACTACTACTACTACTACTACC 419
                      * *  **       *  *    ** *   *        *             * ***   

consensus_7203#1      CAGTTCCTTTCGTCTT--TGTATGTGA-ACGTTAGGCAAAGGTCTGGAGAGGCATCTCT- 444
consensus_7203#2      ACGATCGGTTCGTCTC--GCTG-GTGA-GTCTTATGTACAAGAAGTAGGAG--------- 252
consensus_7203#0      CGTTTCTTTCCGGTTTATTTTAGATAGCATGTAGAGCATATGTAGTTCGAACGATATCTG 479
                          **  * **  *     *   *      *   * * * *      **          

consensus_7203#1      CGCATCTGGCTTATA-TATCGT-TAGGGGATAAAAAATAGTACGACGCAGAGGAGGGGGG 502
consensus_7203#2      TGGAACTGG--------GTGGT-CAGAACAGCAGAGAATGGGCGG----AAGGAACAAGG 299
consensus_7203#0      CACGTTTTTTCTGCAATACGACGCACGACGCACACAGTGGATAGGCATCATCACCCTATG 539
                            *                 *              *   *               *

consensus_7203#1      AGAAATGCGATGGAGAACTTTTAGCTATGCGCGATTATTGAAAAGTAAGAAACGTTTGTA 562
consensus_7203#2      GAACACGTT-TACAAAGCGACAAACGACGCGTG----TCGCGAATGGACAAATGTGCAAA 354
consensus_7203#0      GAAAGGGTTTACGAAGAGATATATACATAGATAGAGAGAGAGAGAGAGAGAGCAAGAGCA 599
                        *   *      *        *   *            *  *       *        *

consensus_7203#1      CTC----------CC-GTCCCACGGCGGGATGA--GATTGGCGATGAAATGACAAAAAGG 609
consensus_7203#2      CAC----------CAAGTCCTACTGAGGGGGGA--AACAA---AGCGAATGTTAGGGA-- 397
consensus_7203#0      CACAGTGACGTGACGTGTAACACGGTGCAACGATAGATTAGCGTTAGAAAGTTTAAAAAC 659
                      * *          *  **   ** * *    **   *          ** *      *  

consensus_7203#1      ATTCGATTCGAATCGGCACGAACGATATCTATATATATATACAAATTAATAGATAGTGGA 669
consensus_7203#2      ------------------------------------------------------------
consensus_7203#0      ATTCACAGAAGCAAAAAATAAGCAAAATCCA-ACGCGCACCCCCCTTTTTCGGAAACTTT 718
                                                                                  

consensus_7203#1      ACACACAATACTT--------------------------- 682
consensus_7203#2      ----------------------------------------
consensus_7203#0      CCTTCCGCAATTTTTCCTTCCTGGTCCTGGATTTGAAATA 758