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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7229#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1168 fasta sequence
[CCGCCCACGCGTCCG-AGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTATCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACA----TCTCTCTCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAGCGCAGGTTCGTCGTCACAGCCGGGCACGAGCAAGGCAGGCAGCTCCAAAAAGCACAATCACAGTCTCTCGCTACAGACCAGCCTCACGATGGTGGCCGGCGCAGGCGGCAGTAACTTCCACTCCGAGTTCCGGAACGATCCGGTCGTGAAGGAGATGCGCCAAATACGGGAAGAGAATGCACGGCGCCAGAAGCACGACTACTCGCACGTATTTCGCAACAAATCCCGGTTCGATTTCATTAGAATCTCAGCAGTGATCATGGGCATGGAGTTTGTCTACTCGGCCGAGACGGCCTTCGTCTCACCGATCCTGCTCAGCATCGGCATCGAGCATCAGCTCATGACCATGGTGTGGGGCATCTCGCCCCTGATCGGCTTCTTCCTATCGCCCGTTATCGGTTCCGTCAGCGATCGGTGCCGGTCGAGGTTTGGGCGTCGCCNGNCGGTACTGTTTGCGCTCGGCGTCGGTTTTGATAACNGGCTGCATATTGGTACCGTACGGTCGGAACATTGGCGCGTGGGTTGGAGAT]
[+] EMBL BM582877 [CCGCCCACGCGTCCG AGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTTTCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACATCTCTCTCTCTCTCTCTCTCTCTCTGGGAAGAAGGAAACAGATCCGAGCGCAGGTT ]
[+] EMBL BM592768 [ CCG AGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTATCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACA TCTCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAACGCAGGTTCGTCGTCACAGCCGGGCACGAGCAAGGCAGGCAGCTCCAAAAAGCACAATCACA ]
[+] EMBL BM614242 [ CCGCAGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGCGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTATCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACA TCTCTCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAGCGCAGGTT ]
[+] EMBL BM603167 [ CCGCAGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTT ]
[+] EMBL BM646251 [ ccgCCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGCGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTATCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACA TCTCTCTCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAGCGC ]
[+] EMBL BX624090 [ TGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGACAAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACA TCTCTCTCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAGCGCAGGTTCGTCGTCACAGCCGGGCACGAGCAAGGCAGGCAGCTCCAAAAAGCACAATCACAGTCTCTCGCTACAGACCAGCCTCACGATGGTGGCCGGCGCAGGCGGCAGTAACTTCCACTCCGAGTTCCGGAACGATCCGGTCGTGAAGGAGATGCGCCAAATACGGGAAGAGAATGCACGGCGCCAGAAGCACGACTACTCGCACGTATTTCGCAACAAATCCCGGTTCGATTTCATTAGAATCTCAGCAGTGATCATGGGCATGGAGTTTGTCTACTCGGCCGAGACGGCCTTCGTCTCACCGATCCTGCTCAGCATCGGCATCGAGCATCAGCTCATGACCATGGTGTGGGGCATCTCGCCCCTGATCGGCTTCTTCCTATCGCCCGTTATCGGTTCCGTCAGCGATCGGTGCCGGTCGAGGTTTGGGCGTCGCCNGNCGGTACTGTTTGCGCTCGGCGTCGGTTTTGATAACNGGCTGCATATTGGTACCGTACGGTCGGAACATTGGCGCGTGGGTTGGAGAT]
consensusID : consensus_7229#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence
[CCGCCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTTTCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCCTTTTCTTGCTGCATT]
[+] EMBL BM642152 [CCGCCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGGGCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCGAATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGAAGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTTTCAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCACGTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGCTGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAAAACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAGTTCAGAGGGCGCCTTTTCTTGCTGCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7229#0 CCGCCCACGCGTCCGAGATAACCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGG 60
consensus_7229#1 ------------------CCGCCGGCTGGTGCAGGCACGGGTGCAGCTTCTTCGCCTAGG 42
***************************************
consensus_7229#0 GCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCG 120
consensus_7229#1 GCGTAACAATTCGGCGAGTAAGATCGCGCGTGTACGATCCAGTTTCCAGCTAGTGTTTCG 102
************************************************************
consensus_7229#0 AATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGA 180
consensus_7229#1 AATTGAGTTCTATTTTGAGATCCAATTTCTCGGTTTTTTTTCAAGAACTTGTGTCCTTGA 162
************************************************************
consensus_7229#0 AGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTAT 240
consensus_7229#1 AGAAGCTTTTCCGTGTAGTGATCTCTCTTTCTCTCTCACACTTTCCGCCTAAGTGTGTTT 222
********************************************************** *
consensus_7229#0 CAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCAC 300
consensus_7229#1 CAAAGTGAATTTCCCTCCGCTTAAGTGGATGGGAATAGTGATTCCTTACTCAATCTCCAC 282
************************************************************
consensus_7229#0 GTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGC 360
consensus_7229#1 GTGACGAGCAGGCTTGAAAAAGGCTCCTCCAGGCCACCATTTTGCCACTGCCCGGACTGC 342
************************************************************
consensus_7229#0 TGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAA 420
consensus_7229#1 TGTTGCGCTGCTGTGTGTGAAAGTTATGTGCAAACCGACCACGGTCCTCGTTCCCTGCAA 402
************************************************************
consensus_7229#0 AACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAG 480
consensus_7229#1 AACCAGACGTCTGGACGCATTGAGCCGTCACCAGTGCAGTGGAAGAACATTAGCGAGTAG 462
************************************************************
consensus_7229#0 TTCAGAGGGCGCTGAAAAGCCGTGAACAGCTTTTTGAATTTTTGGGTGACCAAAAGTGAC 540
consensus_7229#1 TTCAGAGGGCGCCTTTTCTTGCTGCATT-------------------------------- 490
************ ** *
consensus_7229#0 AAATCAAAAAGCGACCCAAGTTCTTTAAGAAGTCGTTGAAGATAGTGTGTGACATCTCTC 600
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 TCTCTCTCTCTCTCTGTGAAGAAGGAAACAGATCCGAGCGCAGGTTCGTCGTCACAGCCG 660
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 GGCACGAGCAAGGCAGGCAGCTCCAAAAAGCACAATCACAGTCTCTCGCTACAGACCAGC 720
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 CTCACGATGGTGGCCGGCGCAGGCGGCAGTAACTTCCACTCCGAGTTCCGGAACGATCCG 780
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 GTCGTGAAGGAGATGCGCCAAATACGGGAAGAGAATGCACGGCGCCAGAAGCACGACTAC 840
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 TCGCACGTATTTCGCAACAAATCCCGGTTCGATTTCATTAGAATCTCAGCAGTGATCATG 900
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 GGCATGGAGTTTGTCTACTCGGCCGAGACGGCCTTCGTCTCACCGATCCTGCTCAGCATC 960
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 GGCATCGAGCATCAGCTCATGACCATGGTGTGGGGCATCTCGCCCCTGATCGGCTTCTTC 1020
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 CTATCGCCCGTTATCGGTTCCGTCAGCGATCGGTGCCGGTCGAGGTTTGGGCGTCGCCNG 1080
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 NCGGTACTGTTTGCGCTCGGCGTCGGTTTTGATAACNGGCTGCATATTGGTACCGTACGG 1140
consensus_7229#1 ------------------------------------------------------------
consensus_7229#0 TCGGAACATTGGCGCGTGGGTTGGAGAT 1168
consensus_7229#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||