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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7232#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 845 fasta sequence
[GACGTCCCACAAGCATAGAAATCTCTGTGTCTTTAATTGATCAATTGTGCGACCCCAAATCCGCCCAGTCACTGTCACGATAACAGTTTGTGATAACGTTCAGTTTACGGCACAACGCGCTCGAAGCAACCAGCTTTGTCAGTGGTCAGTGCGAA-TTTGGTGCGAATCAACGGAACGGTTTCCATTCCTTCACTAACCCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAAAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGTTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGGCCAGTACGGGTACAAGACGGCTTCAAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAGCGTTGCATGCGCTCGCTCGGCCGCTTTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCGCTTTCCACGAGATCGNCCAGCAGCACGTGGAGGAAACGTACTACAGTGCCCGGCTCAAGTC]
[+] EMBL BX622110 [GACGTCCCACAAGCATAGAAATCTCTGTGTCTTTAATTGATCAATTGTGCGACCCCAAATCCGCCCAGTCACTGTCACGATAACAGTTTGTGATAACGTTCAGTTTACGGCACAACGCGCTCGAAGCAACCAGCTTTGTCAGTGGTCAGTGCGAA TTTGGTGCGAATCAACGGAACGGTTTCCATTCCTTCACTAACCCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAAAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGTTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACNGACGGGGTGAACGATTTCGTCGCGATGG ]
[+] EMBL BX622218 [ AGAAATCTCTGTGTCTTTAATTGATCAATTGTGCGACCCCAAATCCGCCCAGTCACTGTCACGATAACAGTTTGTGATAACGTTCAGTTTACGGCACAACGCGCTCGAAGCAACCAGCTTTGTCAGTGGTCAGTGCGAA TTTGGTGCGAATCAACGGAACGGTTTCCATTCCTTCACTAACCCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAAAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGTTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGGCCAGTACGGGTACAAGACGGCTTCAAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAGCGTTGCATGCGCTCGCTCGGCCGCTTTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCGCTTTCCACGAGATCGNCCAGCAGCACGTGGAGGAAACGTACTACAGTGCCCGGCTCAAGTC]
[+] EMBL BM597834 [ ccgACGCGCTCGAAGCAACCAGCTTTGTCAGTGGTCAGTGCGAACTTTGGTGCGAATCAACGGAACGGTTTCCATTTCTTCACTAACCCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATACCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAAAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGCTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGGCCAGTACGGGTACAAGACGGCTTCAAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAGCGTTGCATGCGCTCGCTCGGCCGC TTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCG ]
consensusID : consensus_7232#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[CCGAGGTTTAGTTGGACTGGAGGAGTGCAACACGTTGCATTCGCTCGTCTCGGCCGCTTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCGCTTTCACGAGATCGCCCAGCAGCACGTGGAGGAAACGTACTACAGTGCCCGGTCAAGTCGTGGTACAACAACTTCCTGCAGTGTGCAGATCTGATATCTGCGCGCGACGCGATGGCGCGCGAATATCCCGGCACCGAGCTGGAGCTGCACGATGGAGAAGTTTTTCGACTGCGACCTGTACGACACATGGTGTACCTGACGCACNACGCGCAACCAGAACTACGGTCATCAAACCACGGTGACTGCTGGATGCCGAACTTTCTGTTGCCACGACAGCACGCCGGCGATGCGCATGATCGACTTTCAGGCTCGACCCGCATACTGCTCGCCCAGCGCATCGAAATTGCGTTCTTCGTGTACTCCTGCACCAGACCANGGCGTTGCGCGACGCGCACTATGAGNGATCTAGCATCGGCGCGTACCACAGGAGGGCTGGCGGAGATGCTGCGCGCATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGAGCTGGAGAAGGAGATGCGCCAGTACGCCCGGTTCGGGTGCGGCATGGGCAT]
[+] EMBL AL929644 [CCGAGGTTTAGTTGGACTGGAGGAGTGCAACACGTTGCATTCGCTCGTCTCGGCCGCTTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCGCTTTCACGAGATCGCCCAGCAGCACGTGGAGGAAACGTACTACAGTGCCCGGTCAAGTCGTGGTACAACAACTTCCTGCAGTGTGCAGATCTGATATCTGCGCGCGACGCGATGGCGCGCGAATATCCCGGCACCGAGCTGGAGCTGCACGATGGAGAAGTTTTTCGACTGCGACCTGTACGACACATGGTGTACCTGACGCACNACGCGCAACCAGAACTACGGTCATCAAACCACGGTGACTGCTGGATGCCGAACTTTCTGTTGCCACGACAGCACGCCGGCGATGCGCATGATCGACTTTCAGGCTCGACCCGCATACTGCTCGCCCAGCGCATCGAAATTGCGTTCTTCGTGTACTCCTGCACCAGACCANGGCGTTGCGCGACGCGCACTATGAGNGATCTAGCATCGGCGCGTACCACAGGAGGGCTGGCGGAGATGCTGCGCGCATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGAGCTGGAGAAGGAGATGCGCCAGTACGCCCGGTTCGGGTGCGGCATGGGCAT]
consensusID : consensus_7232#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence
[ATCGCCCGAGGTTTAACGGTTTCTTTCCTTCACTAACCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATTGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAGAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGCTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGGCCAGTACGGGTACAAGACGGCTTCGAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAAC]
[+] EMBL AL930700 [ATCGCCCGAGGTTTAACGGTTTCTTTCCTTCACTAACCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAAGCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATTGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAGAATGTGGGCCGCCGGAACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAACGTGGTGCTGAAGGAGCTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAACCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGGCCAGTACGGGTACAAGACGGCTTCGAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAAC]
consensusID : consensus_7232#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 378 fasta sequence
[CATGATCGACTTTCAGCTCGCCCGCTACATGCTCGCCCGCGCTCGACATTGCGTTCTTCGTGTACTCCTGTACCAGCCAGGCGTTGCGCGACGAGCACTATGAGGATCTGCTCGGCGCGTACCACGGCGGGCTGGCGGAGATGCTGCGCGATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGAGCTGGAGCCGGAGATGCGCCAGTACGCCCGGTTCGGATGCGGCATGGGCATCGAGTCGATACCGTTCTCGCTGCTGGACGAATAGGAGGTGCCCGATCTGGACAAGAGCACGGGCGAGCAGGCGGTCCCGATCGAGCAGCTCTGGATCCTGCGCCCGATTGCCAGCCAGGCCGGCCGGCGGCGACTGA]
[+] EMBL AGA282904 [CATGATCGACTTTCAGCTCGCCCGCTACATGCTCGCCCGCGCTCGACATTGCGTTCTTCGTGTACTCCTGTACCAGCCAGGCGTTGCGCGACGAGCACTATGAGGATCTGCTCGGCGCGTACCACGGCGGGCTGGCGGAGATGCTGCGCGATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGAGCTGGAGCCGGAGATGCGCCAGTACGCCCGGTTCGGATGCGGCATGGGCATCGAGTCGATACCGTTCTCGCTGCTGGACGAATAGGAGGTGCCCGATCTGGACAAGAGCACGGGCGAGCAGGCGGTCCCGATCGAGCAGCTCTGGATCCTGCGCCCGATTGCCAGCCAGGCCGGCCGGCGGCGACTGA]
consensusID : consensus_7232#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 167 fasta sequence
[CCCCCAGGTTTAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGGACGAACCG]
[+] EMBL AL694241 [CCCCCAGGTTTAACGCTGGACGAGATAGTGCGGTGTGCGGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGGAAACCAACTTCACCAAGGGTGACGCGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGGGACGAACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7232#0 GACGTCCCACAAGCATAGAAATCTCTGTGTCTTTAATTGATCAATTGTGCGACCCCAAAT 60
consensus_7232#2 ------------------------------------------------------------
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 -CCGAGGTTTAGTTGGACTGGAGGAGTGCAACACGTTGCATTCGCTCGTCTCGGCCGCTT 59
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 CCGCCCAGTCACTGTCACGATAACAGTTTGTGATAACGTTCAGTTTACGGCACAACGCGC 120
consensus_7232#2 ------------------------------------------------------------
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 CCATGCCCTGTCGCTAGCGATGAAGGAACAGGAACCGGACCGCTTTCACGAGATCGCCCA 119
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 TCGAAGCAACCAGCTTTGTCAGTGGTCAGTGCGAATTTGGTGCGAATCAACGGAACGGTT 180
consensus_7232#2 ------------------------------------ATCGCCCGAG---GTTTAACGGTT 21
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 GCAGCACGTGGAGGAAACGTACTACAGTGCCCGGTCAAGTCGTGGTACAACAACTTCCTG 179
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 TCCATTCCTTCACTAACCCCCCCACGCACCCACGATGGACACGCAGCGGGTGGCACTGAA 240
consensus_7232#2 TCT-TTCCTTCACTAACCCCCC-ACGCACCCACGATGGACACGCAGCGGGTGGCACTGAA 79
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 CAGTGTGCAGATCTGATATCTGCGCGCGACGCGATGGCGCGCGAATATCCCGGCACCGAG 239
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 GCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATAGTGCGGTGTGC 300
consensus_7232#2 GCTGAGCGACATTTCGCCAAAGTTCACGGAGGAAACGCTGGACGAGATTGTGCGGTGTGC 139
consensus_7232#4 ----------------------CCCCCAGGTTTAACGCTGGACGAGATAGTGCGGTGTGC 38
consensus_7232#1 CTGGAGCTGCACGATGGAGAAGTTTTTCGACTGCGACCTGTACGACACATGGTGTACCTG 299
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 GGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGG-AAACCAACTTCACCAAGGGTGACG 359
consensus_7232#2 GGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGG-AAACCAACTTCACCAAGGGTGACG 198
consensus_7232#4 GGGCGGGAAGCGCTGCACGGGCTGGAAGATCCCGGGAAACCAACTTCACCAAGGGTGACG 98
consensus_7232#1 ACGCACNACGCGCAACCAGAACTACGGTCATCAAACCACGGTGACTGCTGGATGCCGAAC 359
consensus_7232#3 ------------------------------------------------------------
consensus_7232#0 CGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGG 419
consensus_7232#2 CGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGG 258
consensus_7232#4 CGTACCTGAGCGAGCTGTACCGCATCCAGCTGACCGGGGAGCCGGCCGAACCGGGCCGGG 158
consensus_7232#1 TTTCTGTTGCCACGACAGCACGCCGGCGATGCGCATGATCGACTTTCAGGCTCGACCCGC 419
consensus_7232#3 ---------------------------------CATGATCGACTTTCAG-CTCGCCCGCT 26
* * * * * * * **
consensus_7232#0 -ACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAAAATGTGGGCCGCCGG 478
consensus_7232#2 -ACGAACCGCTGGTGGTGAATGTGGTCGTGAAAACGATCCCGAAGAATGTGGGCCGCCGG 317
consensus_7232#4 GACGAACCG--------------------------------------------------- 167
consensus_7232#1 ---ATACTGCTCGCCCAGCGCATCGAAATTGCGTTCTTCGTGTACT-CCTGCACCAGACC 475
consensus_7232#3 ---ACA-TGCTCGCCC-GCGC-TCGACATTGCGTTCTTCGTGTACT-CCTGTACCAGCC- 78
* *
consensus_7232#0 AACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAAC-GTGGTGCT 537
consensus_7232#2 AACACGTTCCGGTCGGCGGACTTTTTCCGCAACGAGGCCAACTTTTACAAC-GTGGTGCT 376
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 ANGGCGTTGCGCGACGCGCACTATGAGNGATCTAGCATCGGCGCGTACCACAGGAGGGCT 535
consensus_7232#3 -AGGCGTTGCGCGACGAGCACTATGAGG-ATCTGC--TCGGCGCGTACCAC-GGCGGGCT 133
consensus_7232#0 GAAGGAGTTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAA 597
consensus_7232#2 GAAGGAGCTGTACCGCTTTCAGGACGCGCGCAAACCGGCCAACCCGTTCAAGGACATTAA 436
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 GGCGGAG--ATGCTGCGCGCATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGA 593
consensus_7232#3 GGCGGAG--ATGCTGCGCG-ATCTCGGCTCCGATCCGGACACGGTCTTCCCGCGCGCCGA 190
consensus_7232#0 CCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGG 657
consensus_7232#2 CCCATGCTATGTGGCGTACACGGACGGGGTGAACGATTTCGTCGCGATGGAAGACCTTGG 496
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 GCTGGAGAAGGAGATGCGCCAGTACGCCCGGTTCGGGTGCGGCATGGGCAT--------- 644
consensus_7232#3 GCTGGAGCCGGAGATGCGCCAGTACGCCCGGTTCGGATGCGGCATGGGCATCGAGTCGAT 250
consensus_7232#0 CCAGTACGGGTACAAGACGGCTTCAAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAGCG 717
consensus_7232#2 CCAGTACGGGTACAAGACGGCTTCGAGAGCCGAAGGTGTCGGACTGGAGGAGTGCAAAC- 555
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 ------------------------------------------------------------
consensus_7232#3 ACCGTTCTCGCTGCTGGACGAATAGGAGGTGCCCGATCTGGACAAGAGCACGGGCGAGCA 310
consensus_7232#0 TTGCATGCGCTCGCTCGGCCGCTTTCCATGCCCTGTCGCTAGCGATGAAGGAACAGGAAC 777
consensus_7232#2 ------------------------------------------------------------
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 ------------------------------------------------------------
consensus_7232#3 GGCGGTCCCGATCGAGCAGCTCTGGATCCTGCGCCCGATTGCCAGCCAGGCCGGCCGGCG 370
consensus_7232#0 CGGACCGCTTTCCACGAGATCGNCCAGCAGCACGTGGAGGAAACGTACTACAGTGCCCGG 837
consensus_7232#2 ------------------------------------------------------------
consensus_7232#4 ------------------------------------------------------------
consensus_7232#1 ------------------------------------------------------------
consensus_7232#3 GCGACTGA---------------------------------------------------- 378
consensus_7232#0 CTCAAGTC 845
consensus_7232#2 --------
consensus_7232#4 --------
consensus_7232#1 --------
consensus_7232#3 --------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||