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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7294#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1231 fasta sequence
[CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATCGTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTGATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCACTGAATGCGCTAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT-----GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG--AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAGCGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGCGGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAAGTGGATGCTTCGGGATGGAACACCAAAAAAAA]
[+] EMBL BM578961 [CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATCGTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTGATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCACTGAATGCGCTAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCG ]
[+] EMBL BX611969 [ AGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT GTTGTTGCGGG ]
[+] EMBL BX612055 [ AGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCA ]
[+] EMBL BM639057 [ ccgAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGCCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGAGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTTGGTTGGTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGGAAAAAAAAAACACTCACCAAAAAC AAAAAATCATTTGC ]
[+] EMBL AGA285522 [ CAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGAAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAG ]
[-] EMBL AGA284221 [ GGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGAAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAGCGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGCGGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAAGTGGATGCTTCGGGATGGAACACCAAAAAAAA]
consensusID : consensus_7294#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence
[CCGATCCTTGTTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGAC]
[+] EMBL BM624304 [CCGATCCTTGTTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7294#0 CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATC 60
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 GTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTG 120
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 ATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCA 180
consensus_7294#1 --------------------------------------------------CCGATCCTTG 10
*** *
consensus_7294#0 CTGAATGCGCT-AATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGA 239
consensus_7294#1 TTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGA 70
* * ** ************************************************
consensus_7294#0 GTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAA 299
consensus_7294#1 GTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAA 130
************************************************************
consensus_7294#0 CCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACAT 359
consensus_7294#1 CCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACAT 190
************************************************************
consensus_7294#0 CGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCT 419
consensus_7294#1 CGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCT 250
************************************************************
consensus_7294#0 GGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACG 479
consensus_7294#1 GGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACG 310
************************************************************
consensus_7294#0 GGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCG 539
consensus_7294#1 GGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCG 370
************************************************************
consensus_7294#0 GCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTC 599
consensus_7294#1 GCACGACAACGAC--GCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTC 428
************* *********************************************
consensus_7294#0 GCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAA 659
consensus_7294#1 GCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAA 488
************************ ******************************** **
consensus_7294#0 GCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCAT 719
consensus_7294#1 GCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCAT 548
************************************************************
consensus_7294#0 GACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTT 779
consensus_7294#1 GACCAAGGCGGACGTGAC------------------------------------------ 566
******************
consensus_7294#0 CGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGT 839
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 CGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTG 899
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 TTGTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGGAA 959
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 AAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGG 1019
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 CACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAG 1079
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 CGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGC 1139
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 GGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAA 1199
consensus_7294#1 ------------------------------------------------------------
consensus_7294#0 GTGGATGCTTCGGGATGGAACACCAAAAAAAA 1231
consensus_7294#1 --------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||