cluster # 7295

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7295 cluster # 7295 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7295#0 length = 880 sequences # 6

consensus_7295#1 length = 587 sequences # 1

consensusID : consensus_7295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 880
fasta sequence

                              [TGCCTTTTAGGACGGTTGGAGAGTTAAGGGTTTTTTTCTGAGAGATTGTCGGCACATTTTGCAAAGCCCGACCAATAGTTACCAGTGAGCTGTGAAGCGTGAATGGGTCTGCTTTCCAAACATGATGGCAATCACTGTCGCCACTTCCGAGTGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCGGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGC-GGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACG-CTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGTGGACGGTTCGGTGTTGAAGGGTTTCCCCAAACTGTCCGGCCTTCATCTGGGTGCCAATCAGCTGGAGGAGTTTCCGTATGCCGATCTGCCCGCCACGCTCGAGTGGCTCGTTTTGTGCCGGAATGATTTTGCTAATATACTGGAGTTTACGGGCATGTATGCGCCTGCGCTGAAGGTGTTGAACCTGCAGGACAATTTCCTGAACAGCTTGAACATTGAC]

[+] EMBL BX604328             [TGCCTTTTAGGACGGTTGGAGAGTTAAGGGTTTTTTTCTGAGAGATTGTCGGCACATTTTGCAAAGCCCGACCAATAGTTACCAGTGAGCTGTGAAGCGTGAATGGGTCTGCTTTCTAAACATGATGGCAATCACTGTCGCCACTTCCGAGTGCGTTCTTGTCTTCCTTTTGTTCCTACAGCATCTTCCGGCTGGTTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCATTCGATACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGC GGACTTTAGTAGCAATCTGATTGTAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACG CTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGTG                                                                                                                                                                                                                           ]
[+] EMBL AGA285453            [                                                  aGCACATTTTGCAAAGCCCGAGC   AGTTACCAGCGAGCTGTGAAGCGTGAATGGGTCTGCTTTCCAAACATGATGGCAATCACTGTCGCCACTTCCGAATGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCCGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM632229             [                                                                                                           ccgGCTTTCCAAACATGATTGCAATCACTGTCGCCACTTCCGAGTGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCGGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGC GGACTTTAGTAGCAATCTTATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACG CTGGTGCATCTCGAAACGCTACTGCTTGCCCAC                                                                                                                                                                                                                                             ]
[+] EMBL AGA282607            [                                                                                                                                                                                                           ACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGC GGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACGCCTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGTGGACG                                                                                                                                                                                                                       ]
[-] EMBL AGA284157            [                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACTTACCGCTCGACCTCGAGTATGCGGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACG CTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGTGGACGGTTCGGTGTTGAAGGGTTTCCCCAAACTGTCCGGCCTTCATCTGGGTGCCAATCAGCTGGAGGAGTTTCCGTATGCCGATCTGCCCGCCACGCTCGAGTGGCTCGTTTTGTGCCGGAATGATTTTGCTAATATACTGGAGTTTACGGGCATGTATGCGCCTGCGCTGAAGGTGTTGAACCTGCAGGACAATTTCCTGAACAGCTTGAACATTGAC]
[-] EMBL AGA280977            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACG CTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGTGGACGGTTCGGTGTTGAAGGGTTTCCCCAAACTGTCCGGCCTTCATCTGGGTGCCAATCAGCTGGAGGAGTTTCCGTATGCCGATCTGCCCGCCACGCTCGAGTGGCTCGTTTTGTGCCGGAATGATTTTGCTAATATACTGGAGTTTACGGGCATGTATGCGCCTGCGCTGAAGGTGTTGAACCTGCAGGACAATTTCCTGAACAGCTTGAACATTGAC]




>consensus_7295#0
TGCCTTTTAGGACGGTTGGAGAGTTAAGGGTTTTTTTCTGAGAGATTGTCGGCACATTTT
GCAAAGCCCGACCAATAGTTACCAGTGAGCTGTGAAGCGTGAATGGGTCTGCTTTCCAAA
CATGATGGCAATCACTGTCGCCACTTCCGAGTGTGTTTTTGTCTTCCTTTTGTTCCTACA
GCATCTTCCGGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCC
CGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACCA
TTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAA
AATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCG
CCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCT
CGAGTATGCGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGG
TTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAG
TTTGCGTACGCTGGTGCATCTCGAAACGCTACTGCTTGCCCACAACCGCATCGTTGTGGT
GGACGGTTCGGTGTTGAAGGGTTTCCCCAAACTGTCCGGCCTTCATCTGGGTGCCAATCA
GCTGGAGGAGTTTCCGTATGCCGATCTGCCCGCCACGCTCGAGTGGCTCGTTTTGTGCCG
GAATGATTTTGCTAATATACTGGAGTTTACGGGCATGTATGCGCCTGCGCTGAAGGTGTT
GAACCTGCAGGACAATTTCCTGAACAGCTTGAACATTGAC

consensusID : consensus_7295#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence

                              [ATCCCCCGAGGTTTGTGAAGCGTGAATGGGTCTGCTTTCCAAACATGATGTGCAATCACTGTCGCCACTTCCGAATGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCCGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGCGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACGCTGGTGCATCTCGAAACGCTACTGNTTGGCCCACAACCGCATCGTTGTGGTGGA]

[+] EMBL AL697435             [ATCCCCCGAGGTTTGTGAAGCGTGAATGGGTCTGCTTTCCAAACATGATGTGCAATCACTGTCGCCACTTCCGAATGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCCGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACACAACCATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGCGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACGCTGGTGCATCTCGAAACGCTACTGNTTGGCCCACAACCGCATCGTTGTGGTGGA]




>consensus_7295#1
ATCCCCCGAGGTTTGTGAAGCGTGAATGGGTCTGCTTTCCAAACATGATGTGCAATCACT
GTCGCCACTTCCGAATGTGTTTTTGTCTTCCTTTTGTTCCTACAGCATCTTCCCGCTGGC
TCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATCCCGGGTCGGAAATATTT
GCCTGCACCGTACCCAACTTTTTCTACAAACCAAACACAACCATTCGACACTGGTAGCGC
CCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATAAAATTCTTCTGCGCGACA
ATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGCGCCCACGAGCAGTTCAAA
TCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACCTCGAGTATGCGGACTTTA
GTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACGGTTCCGAGTATGCGCTAC
GCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATAGTTTGCGTACGCTGGTGC
ATCTCGAAACGCTACTGNTTGGCCCACAACCGCATCGTTGTGGTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7295#0      TGCCTTTTAGGACGGTTGGAGAGTTAAGGGTTTTTTTCTGAGAGATTGTCGGCACATTTT 60
consensus_7295#1      ------------------------------------------------------------
                                                                                  

consensus_7295#0      GCAAAGCCCGACCAATAGTTACCAGTGAGCTGTGAAGCGTGAATGGGTCTGCTTTCCAAA 120
consensus_7295#1      -----------------ATCCCCCGAGGTTTGTGAAGCGTGAATGGGTCTGCTTTCCAAA 43
                                        *  ** * *   ******************************

consensus_7295#0      CATGATG-GCAATCACTGTCGCCACTTCCGAGTGTGTTTTTGTCTTCCTTTTGTTCCTAC 179
consensus_7295#1      CATGATGTGCAATCACTGTCGCCACTTCCGAATGTGTTTTTGTCTTCCTTTTGTTCCTAC 103
                      ******* *********************** ****************************

consensus_7295#0      AGCATCTTCCGGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATC 239
consensus_7295#1      AGCATCTTCCCGCTGGCTCCGGCAACTTTACGAACACACTGTGGGCGCATCAGTGTGATC 163
                      ********** *************************************************

consensus_7295#0      CCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAACCACAACC 299
consensus_7295#1      CCGGGTCGGAAATATTTGCCTGCACCGTACCCAACTTTTTCTACAAACCAAAC-ACAACC 222
                      ***************************************************** ******

consensus_7295#0      ATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATA 359
consensus_7295#1      ATTCGACACTGGTAGCGCCCGGAACGGTACGCAAAGTGAGGCTTGCCTATCCGAGGGATA 282
                      ************************************************************

consensus_7295#0      AAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGC 419
consensus_7295#1      AAATTCTTCTGCGCGACAATATCGTTGCGTACGATGCCGTGCTTCACGAGATCCTAAAGC 342
                      ************************************************************

consensus_7295#0      GCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACC 479
consensus_7295#1      GCCCACGAGCAGTTCAAATCGAAAATGTCATCATCAAGACAGTAGACCTACCGCTCGACC 402
                      ************************************************************

consensus_7295#0      TCGAGTATGCGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACG 539
consensus_7295#1      TCGAGTATGCGGACTTTAGTAGCAATCTGATTGCAACTGTGTCCGCACCGGAAGTGAACG 462
                      ************************************************************

consensus_7295#0      GTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATA 599
consensus_7295#1      GTTCCGAGTATGCGCTACGCTATCTGGACCTGCAGTACAATCGGTTGACAGCGATCGATA 522
                      ************************************************************

consensus_7295#0      GTTTGCGTACGCTGGTGCATCTCGAAACGCTACTGCTTG-CCCACAACCGCATCGTTGTG 658
consensus_7295#1      GTTTGCGTACGCTGGTGCATCTCGAAACGCTACTGNTTGGCCCACAACCGCATCGTTGTG 582
                      *********************************** *** ********************

consensus_7295#0      GTGGACGGTTCGGTGTTGAAGGGTTTCCCCAAACTGTCCGGCCTTCATCTGGGTGCCAAT 718
consensus_7295#1      GTGGA------------------------------------------------------- 587
                      *****                                                       

consensus_7295#0      CAGCTGGAGGAGTTTCCGTATGCCGATCTGCCCGCCACGCTCGAGTGGCTCGTTTTGTGC 778
consensus_7295#1      ------------------------------------------------------------
                                                                                  

consensus_7295#0      CGGAATGATTTTGCTAATATACTGGAGTTTACGGGCATGTATGCGCCTGCGCTGAAGGTG 838
consensus_7295#1      ------------------------------------------------------------
                                                                                  

consensus_7295#0      TTGAACCTGCAGGACAATTTCCTGAACAGCTTGAACATTGAC 880
consensus_7295#1      ------------------------------------------