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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7312#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1116 fasta sequence
[GAGGGCACGCAGCTACATCGCGATAAAGTTCGGCAGTTAAAGATGTCTCCCCCGGCGAGCTCCAACAACTATT-CCGTCGAAAAACGTCCACCAAC-GTACGATCAGTATGAGTTTACCCTGCCCGACCT-GTACCGCAAGATGGCAAAGGATGAGCTCCGCGAGGACGACGAGATTCGGGAGCAATCGTTAACGCAAATGAGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGTACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTGCCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTTAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGCGGACGGTGTGTTCACGAAGCTGGGACAAGATTCGGAGGGCCGCATGGTGATCCTGTTCCGCGTGAAGCAGCTGAACGTGGACAAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAGTGGGAAGAGCTACAGATCGGTGGCTTCCGGGTGATGCTTGACTTCACCGACACCGTCATGAAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTGCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCACAATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGTAGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGGAACGTGATACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGGAGCCAAACAAACTTGGTGGAAAATGAGGTCGAGGGCGGTGTGGCCGGTAGCTTCCGGAAGCTGAATGTAGATTAGTTGTCCGAATACAAGGATAAAGATTGTAGGTTGTAAGATCACAAGAAACGGGATAGAGTTATAATAAAATCATTCGAATTT]
[+] EMBL AL934535 [GAGGGCACGCAGCTACATCGCGATAAAG TCGGCAGTTAAAGATGTCTCCCCCGGCGAGCTCCAACAACTATTCCCGTCGAAAAACGTCCACCAACGGTACGATCAGTATGAGTTTACCCTGCCCGACCTGGTACCGCAAGATGGCAAAGGATGAGCTCCGCGAGGACGACGAGATTCGGGAGCAATCGTTAACGCAAATGAGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGTACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTGCCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTTAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGa ]
[+] EMBL CNS09NXB [ CTACATCACGATAAAGTTCGGCAGTTAAAGATGTCTCCCCCGGCGAGCTCCAACAACTATT CCGTCGAAAAACGTCCACCAAC GTACGATCAGTATGAGTTTACCCTGCCCGATCT GTACCGCAAGATGGCAAAGGATGAGCTCCGCGAGGACGACGAGATTCGGGAGCAATCGTTGACGCAAATGAGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGAACGGATGCATCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTTAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGCGGACGGTGTGTTCACGAAGCTGGGACAAGATTCGGAGGGCCGCATGGTGATCCTGTTCCGCGTGAAGCAGCTGAACGTGGACAAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAGTGGGAAGAGCTACAGATCGGTGGCTTCCGGGTGATGCTTGACTTCACCGACACCGTCATGAAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTGCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCACAATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGTAGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGGAACGTGATACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGGAGC ]
[+] EMBL BX625093 [ CGATAAAGTTCGGCAGTTAAAGATGTCTCCCCCGGCGAGCTCCAACAACTATT CCGTCGAAAAACGTCCACCAAC GTACGATCAGTATGAGTTTACCCTGCCCGACCT GTACCGCAAGATGGCAAAGGATGAGCTCCGCGAGGACGACGAGATTCGGGAGCAATCGTTAACGCAAATGAGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGTACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTGCCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTTAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGAGGACGGTGTGTTCACGAAGCTGGGACAAGATTCGGAGGGCCGCATGGTGATTCTGTTCCGCGTGAAGCAGCTGAACGTGGACAAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAGTGGGAAGAGCTACAGATCGGTGGCTTCCGGGTGATGCTGGACTTCACCGACACCGTCATGAAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTGCTAACGTTCGCCAGTCCC AGCTGAAGGAACGAAT ]
[+] EMBL BX613525 [ AAAGTACTCCGTACCAATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTCAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGCGGACGGTGTGTTCACGAAGCTGGGACAAGATTCGGAGGGCCGCATGGTGATCCTGTTCCGCGTGAAGCAGCTGAACGTGGACAAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAGTGGGAAGAGCTACAGATCGGTGGCTTCCGGGTGATGCTTGACTTCACCGACACCGTCATGAAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTCCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCACAATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGTGGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGGAACGTGATACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGGAGCCAAACAAACTTGGTGGAAAATGAGGTCGAGGGCGGTGTGGCCGGTAGCTTCCGGAAGCTGAATGTAGATTAGTTGTCCGAATACAAGGATAAAGATTGTAGGTTGTAAGATCACAAGAAACGGGATAGAGTTATAATAAAAT ]
[+] EMBL BX627533 [ GTGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTCCAAGAAGCTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGCGGACGGTGTGTTCACGAAGCTGGGACAAGATTCGGAGGGCCGCATGGTGATCCTGTTCCGCGTGAAGCAGCTGAACGTGGACAAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAGTGGGAAGAGCTACAGATCGGAGGCTTCCGGGTGATGCTTGACTTCACCGACACCGTCATGAAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTGCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCACAATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGTGGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGGAACGTGATACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGGAGCCAAACNAACTTGGTGGAAAATGAGGTCGAGGGCGGT ]
[-] EMBL CNS09NXC [ TGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGCTCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGATACTGAACCTGCTGCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCACAATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGTAGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGGAACGTGAAACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGGAGCCAAACAAACTTGGTGGAAAATGAGGTCGAGGGTGGTGTGGCCGGTAGCTTCCGAAAGCTGAATGTAGATTAGTTGTCCGAATACAAGGATAAAGATTGTAGGTTGTAAGATAACAAGAAACGGGATAGAGTTATAATAAATCCATTCGAATTT]
consensusID : consensus_7312#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 603 fasta sequence
[GGGAGCAATCGTTGACGCAGATGCGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGTACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGTGAGACCTTTCCGCAGTGGTTTAAGAATCTTGATTGCAATGACTCCGCAATGCGAGAAATGCTTCAGGACGGTGTGTTTACGAAGCTCGGCCAAGATGCCGAGGGCAGGACGGTGATCCTCTTCCGGTTTGCCCGTTTCAATGTGGACAAGTTTACCTCACTGCAGGAAGGTCGCTTTACGGTGCTGCTCATCGAGACGCTGCTCGAGTGTGAAGAGCTGCAGATCGGTGGCTTTCGGGTGCTAATCGATTATACTGGCTCAGTGTTAAAGCACTACGGCATTTGGGGCGTTTCGGACATGAAGGTGTTTACGGATGCGATCAACCGCTCCTACCCGATACGGATCCGTGAGGTGCATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGTTACTCAACTTGCTGCTGACGTTCGCTAGCCCAAAGTTGAAGGACCGCATCACATGTC]
[+] EMBL BX617344 [GGGAGCAATCGTTGACGCAGATGCGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGTACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGATACCTTGCGATGCGTGAGACCTTTCCGCAGTGGTTTAAGAATCTTGATTGCAATGACTCCGCAATGCGAGAAATGCTTCAGGACGGTGTGTTTACGAAGCTCGGCCAAGATGCCGAGGGCAGGACGGTGATCCTCTTCCGGTTTGCCCGTTTCAATGTGGACAAGTTTACCTCACTGCAGGAAGGTCGCTTTACGGTGCTGCTCATCGAGACGCTGCTCGAGTGTGAAGAGCTGCAGATCGGTGGCTTTCGGGTGCTAATCGATTATACTGGCTCAGTGTTAAAGCACTACGGCATTTGGGGCGTTTCGGACATGAAGGTGTTTACGGATGCGATCAACCGCTCCTACCCGATACGGATCCGTGAGGTGCATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCGTTACTCAACTTGCTGCTGACGTTCGCTAGCCCAAAGTTGAAGGACCGCATCACATGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7312#0 GAGGGCACGCAGCTACATCGCGATAAAGTTCGGCAGTTAAAGATGTCTCCCCCGGCGAGC 60
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 TCCAACAACTATTCCGTCGAAAAACGTCCACCAACGTACGATCAGTATGAGTTTACCCTG 120
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 CCCGACCTGTACCGCAAGATGGCAAAGGATGAGCTCCGCGAGGACGACGAGATTCGGGAG 180
consensus_7312#1 -------------------------------------------------------GGGAG 5
*****
consensus_7312#0 CAATCGTTAACGCAAATGAGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGT 240
consensus_7312#1 CAATCGTTGACGCAGATGCGGGAGTGGATTGCCAAACATCCGTACATTCGCAAGTGCCGT 65
******** ***** *** *****************************************
consensus_7312#0 ACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTGCCGATGGCG 300
consensus_7312#1 ACGGATGCGTCGTTTCTGTTGCGCTTTTTGCGCTTCCGAAAGTACTCCGTACCGATGGCG 125
************************************************** *********
consensus_7312#0 TGTGAGGCGCTGGAGCGATACCTTGCGATGCGCGAAACGTTTCCTACGTGGTTTAAGAAG 360
consensus_7312#1 TGTGAGGCGCTGGAGCGATACCTTGCGATGCGTGAGACCTTTCCGCAGTGGTTTAAGAAT 185
******************************** ** ** ***** ************
consensus_7312#0 CTGGACTGCAACGATCCGGCAATGCGAGAGCTGTTCGCGGACGGTGTGTTCACGAAGCTG 420
consensus_7312#1 CTTGATTGCAATGACTCCGCAATGCGAGAAATGCTTCAGGACGGTGTGTTTACGAAGCTC 245
** ** ***** ** * *********** ** * ************ ********
consensus_7312#0 GGACAAGATTCGGAGGGCCGCATGGTGATCCTGTTCCGCGTGAAGCAGCTGAACGTGGAC 480
consensus_7312#1 GGCCAAGATGCCGAGGGCAGGACGGTGATCCTCTTCCGGTTTGCCCGTTTCAATGTGGAC 305
** ****** * ****** * * ********* ***** * * * ** ******
consensus_7312#0 AAGTTTGGACCGCTGGAGCAGGGCCGGCTGGTGGCGCTGCTGATTGAGGCACTGCTCGAG 540
consensus_7312#1 AAGTTTACCTCACTGCAGGAAGGTCGCTTTACGGTGCTGCTCATCGAGACGCTGCTCGAG 365
****** * *** ** * ** ** * ** ****** ** *** * *********
consensus_7312#0 TGGGAAGAGCTACAGATCGGTGGCTTCCGGGTGATGCTTGACTTCACCGACACCGTCATG 600
consensus_7312#1 TGTGAAGAGCTGCAGATCGGTGGCTTTCGGGTGCTAATCGATTATACTGGCTCAGTGTTA 425
** ******** ************** ****** * * ** * ** * * * ** *
consensus_7312#0 AAGCACTACGGTATGTGGGGCGTCTCCGACATGAAGATCTTCATGGATGCGATCAACCGC 660
consensus_7312#1 AAGCACTACGGCATTTGGGGCGTTTCGGACATGAAGGTGTTTACGGATGCGATCAACCGC 485
*********** ** ******** ** ********* * ** * ****************
consensus_7312#0 TCGTACCCTATACGGTTCCGCGAGATTAATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCG 720
consensus_7312#1 TCCTACCCGATACGGATCCGTGAGGTGCATGGTGCCAAGTTTCCCAAGTTTGCTGTTTCG 545
** ***** ****** **** *** * ********************************
consensus_7312#0 ATACTGAACCTGCTGCTAACGTTCGCCAGTCCCAAGCTGAAGGAACGAATAGTTTGTCAC 780
consensus_7312#1 TTACTCAACTTGCTGCTGACGTTCGCTAGCCCAAAGTTGAAGGACCGCATCACATGTC-- 603
**** *** ******* ******** ** ** *** ******* ** ** ****
consensus_7312#0 AATACGGTGCTGGAGATGAAGGGAAAATTCGAACCTTCGCTACTACCACAGTCGTACGGT 840
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 AGTGAGCTGGATACGGAGGAGATGGGGCGCAAATTTTTGAAACATCTCGAGGATCGTCGG 900
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 AACGTGATACTGGCGCTGGATGATATGGATATCGATGTAGCACACTACTCTTCGCTGTGG 960
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 AGCCAAACAAACTTGGTGGAAAATGAGGTCGAGGGCGGTGTGGCCGGTAGCTTCCGGAAG 1020
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 CTGAATGTAGATTAGTTGTCCGAATACAAGGATAAAGATTGTAGGTTGTAAGATCACAAG 1080
consensus_7312#1 ------------------------------------------------------------
consensus_7312#0 AAACGGGATAGAGTTATAATAAAATCATTCGAATTT 1116
consensus_7312#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||