cluster # 7318

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Anopheles gambiae
cluster # 7318 cluster # 7318 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7318#0 length = 836 sequences # 2

consensus_7318#1 length = 802 sequences # 5

consensusID : consensus_7318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 836
fasta sequence

                              [CCGCCCACGCGTCCGCCAACGCGTCCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTTGATAATACAAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGGTTTTTGCGTGGGCTAATTCATTGGCCAGATTATTTAATTATTTCAGGTAATTTTACCTGGCCGTGGATGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTCATTTAAACTTCTGTAACTTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTATGTGTACCCT]

[+] EMBL BM643542             [CCGCCCACGCGTCCGCCAACGCGTCCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTTGATAATACAAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGGTTTTTGCGTGGGCTAAT                                                                                                                                                                 ]
[+] EMBL BM618898             [                                                                                                                                                                                                                                                                           ccGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGTTTTTTGCGTGGGCTAATTCATTGGCCAGATTATTTAATTATTTCAGGTAATTTTACCTGGCCGTGGATGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTCATTTAAACTTCTGTAACTTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTATGTGTACCCT]




>consensus_7318#0
CCGCCCACGCGTCCGCCAACGCGTCCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTT
GATAATACAAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAAT
GCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCC
TCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCC
GATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCT
CCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTG
CAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCAT
ACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTT
TCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTC
AACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTT
TTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGGTT
TTTGCGTGGGCTAATTCATTGGCCAGATTATTTAATTATTTCAGGTAATTTTACCTGGCC
GTGGATGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTCATTTAAACTTCTGTAAC
TTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTATGTGTACCCT

consensusID : consensus_7318#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 802
fasta sequence

                              [ATTTTCTCTTGGATCGGTGCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTTGATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGTTTTTTGCGTGGGCTAATTCATTGGTCAGATTAAATTACCTGGCCGTGGACGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTTATTTAAACTTTTGTAACTTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTA]

[+] EMBL BX625784             [ATTTTCTCTTGGATCGGTGCGGATCTGTGCAAAATCCTAAACATGTGCAGTGTTGATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGTTTTTTGCGTGGGCTAATTCATTGGTCAGATTAAATGACCTGGCCATGAACGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTTATTTAAACTTTTGTAACTTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTA]
[+] EMBL BM599622             [                  cCGGATCTGTGCAAAATTCT AACATGTGCAGTGTTGATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAAT                                                                                                                                                                       ]
[+] EMBL BM578033             [                   ccGATCTGTGCAAAATTCTAAACATGTGCAGTGTTGATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTG TTTTTGCGTGGGCTAATTCATTGG                                                                                                                              ]
[+] EMBL BM593716             [                                                   ccgGATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCTTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGATCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATATGCTCAACTTTTCAACCCTGCAACTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATGGCTGTTTTTTGCGTGGGGTAATTCATTGGTCAGATTAAATTACCTGGCCGTGGACGGAACACGGTAATAAAAGTTA                                                                               ]
[+] EMBL BX620372             [                                                      GATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAAAAGATCCTGACGAGAACGAAATCCGCCCNNGAACCAAGCATTTCCGGGTTTTCCTCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCCGATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTTTTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTG TTTTTGCGTGGGCTAATTCATTGGNCAGATTAAATTACCTGGCCGNGG                                                                                                      ]




>consensus_7318#1
ATTTTCTCTTGGATCGGTGCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTTGATAAT
ACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAATGCTGAA
AAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCCTCAATC
ATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCCGATTTC
GAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCTCCATCA
AACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTGCAAAGC
AGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCATACCATC
CACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTTTCCCGG
TGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTCAACTTT
TCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTTTTATGG
TTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGTTTTTTGCG
TGGGCTAATTCATTGGTCAGATTAAATTACCTGGCCGTGGACGGAACACGGTAATAAAAG
TTATAATTATTTTCTTTTTATTTAAACTTTTGTAACTTCTAAAGCTGGAAGCAAGTGTCT
CAAATTGATTTGTAATAAATTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7318#0      CCGCCCACGCGTCCGCCAACGCGTCCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTT 60
consensus_7318#1      ------ATTTTCTCTTGGATCGGTGCGGATCTGTGCAAAATTCTAAACATGTGCAGTGTT 54
                            *      *    *   ** ***********************************

consensus_7318#0      GATAATACAAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAAT 120
consensus_7318#1      GATAATACGAAGCGTATCGCAACCTTCCTGGAGGTTCCGCTTGGAAAAGTGGGATACAAT 114
                      ******** ***************************************************

consensus_7318#0      GCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCC 180
consensus_7318#1      GCTGAAAAGATCCTGACGAGAACGAAATCCGCCCAAGAACCAAGCATTTCCGGGTTTTCC 174
                      ************************************************************

consensus_7318#0      TCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCGGTTCGGCAGGCTCATTCC 240
consensus_7318#1      TCAATCATCCAGTCTTTAATCCGAGAGTCGAAAAAGTCGTCAGTTCGGCAGGCTCATTCC 234
                      ***************************************** ******************

consensus_7318#0      GATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCT 300
consensus_7318#1      GATTTCGAAACAGAATGCCAGATATTGCAGTGGCTGGATTACGCCGTACTGTTTGTGGCT 294
                      ************************************************************

consensus_7318#0      CCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTG 360
consensus_7318#1      CCATCAAACAAGGACAAACACACCGCCAAGAGCCTGCTGGACGAACTTAATTTCTACTTG 354
                      ************************************************************

consensus_7318#0      CAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCAT 420
consensus_7318#1      CAAAGCAGATCCTATTTGGTAAATGATACCCTCAGCGTAGCGGATGTAGTAGTGTTTCAT 414
                      ************************************************************

consensus_7318#0      ACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTT 480
consensus_7318#1      ACCATCCACGAGACTATGGCAAATCTTCAACCACTCGAAAAGGAAAACTTCCTTAACGTT 474
                      ************************************************************

consensus_7318#0      TCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTC 540
consensus_7318#1      TCCCGGTGGTTCCATCACCTTCAGCAGTTGGGAGAGGTTCGTCAAGGAAAAAATCTGCTC 534
                      ************************************************************

consensus_7318#0      AACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCATACCTAAACCTTGGTT 600
consensus_7318#1      AACTTTTCAACCCTGCAGCTGCTGGAATGGGCTACTGGTACTCACACCTAAACCGTGGTT 594
                      ******************************************** ********* *****

consensus_7318#0      TTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGGTT 660
consensus_7318#1      TTATGGTTCTATCCCCTTCAAGAGTTTTGTTCAAATTTAATGAAATTATTATAGCTGTTT 654
                      ********************************************************* **

consensus_7318#0      TTTGCGTGGGCTAATTCATTGGCCAGATTATTTAATTATTTCAGGTAATTTTACCTGGCC 720
consensus_7318#1      TTTGCGTGGGCTAATTCATTGGTCAGATTA---AATTA---------------CCTGGCC 696
                      ********************** *******   *****               *******

consensus_7318#0      GTGGATGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTCATTTAAACTTCTGTAAC 780
consensus_7318#1      GTGGACGGAACACGGTAATAAAAGTTATAATTATTTTCTTTTTATTTAAACTTTTGTAAC 756
                      ***** ************************************ ********** ******

consensus_7318#0      TTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTATGTGTACCCT 836
consensus_7318#1      TTCTAAAGCTGGAAGCAAGTGTCTCAAATTGATTTGTAATAAATTA---------- 802
                      **********************************************