cluster # 7344

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Anopheles gambiae
cluster # 7344 cluster # 7344 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7344#0 length = 913 sequences # 6

consensus_7344#1 length = 513 sequences # 1

consensusID : consensus_7344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 913
fasta sequence

                              [AATCCCCGAGGTTNCCTTTGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGTGTGAATAGTGTTGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTTGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGA---AACGACCCATCGGGC-TTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCACACGATCTTCAGCGGAAGCACCGGCAGC-AGAACCTGGACACCAGCCGGCGGAGTCCGGCA-GGATGGCGGTGTGCCGCTGCTC-GATGCGCTCGGGTACAGGTGTGGAACAGTGCTACCGGGTCCGCCGAGCATCAGATGCATTTCCACCACCAGCTGGCTTGGCAGATCAACTCGTCCTCGAAGGTTGAAGTCACGGTACAAACGTTAAAAAAAGAGAAATAATANTAACCAGGCATGTGAAACCTCGGGGGCA]

[+] EMBL AL695369             [AATCCCCGAGGTTNCCTTTGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX621416             [          actcCCTTTGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGANTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGTGTGAATAGTGTTGTATTTTGTTCCTGCTTAGAGTGTTTTACTTTTATTTGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGA   AACGACCCATCGGGC TTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCACACGATCTTCAGCGGAAGCACCGGCAGC AGAACCTGGACACCAGCCGGCGGAGTCCGGCA GGATGGCGGTGTGCCGCTGCTC GATGCGCTCGGGTACAGGTGTGGAACAGTGCTACCGGGTCCG                                                                                                                                 ]
[+] EMBL BM586004             [                 ccGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGTGTGAATAGTGTTGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTTGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGA   AACGACCCATCGGGC TTATCAGCGCACA                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM638196             [                                          ccGCAAAGGTCCGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGTGTGAATAGTGTTGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTTGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGA   AACGACCCATCGGGCTTTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCACACGATCTTCAGCGGAA                                                                                                                                                                                                                                               ]
[+] EMBL BX628495             [                                                     CGTATCGGATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAAAATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGTGTGAATAGTGTTGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTTGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGA   AACGACCCATCGGGC TTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCACACGATCTTCAGCGGAAGCACCGGCAGC AGAACCTGGACACCAGCCGGCGGAGTCCGGCAGGGATGGCGGTGTGCCGCTGCTC GATGCGCTCGGGTACAGGTGTGG                                                                                                                                                    ]
[-] EMBL AL930633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTATCGCACGATATANTGACCCATCGGGC TTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCACACGATCTTCAGCGGAAGCACCGGCAGCAAGAACCTGGACACCAGCCGGCGGAGTCCGGCA GGATGCCGGTGTGCCGCTGCTCANATGCGCTCGGGTACAGGTGTGGAACAGTGCTACCGGNTCCGCCGAGCATCAGATGCATTTCCACCACCAGCTGGCTTGGCAGATCAACTCGTCCTCGAAGGTTGAAGTCACGGTACAAACGTTAAAAAAAGAGAAATAATANTAACCAGGCATGTGAAACCTCGGGGGCA]




>consensus_7344#0
AATCCCCGAGGTTNCCTTTGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCG
GATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAA
AATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTG
TCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATC
GAAATCTTACCCGTGCGGTGTTGCAATAATAAGCTCTACCGAGTCAGAATCATCTCTTAC
CCCGCTTTTGAGTTTGCGAATCGACCAGCGGGAGTACCAAATTTACGGAGTCGCATTTCA
AGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAAGTGT
GTGAATAGTGTTGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTTGGAGGAAAAAT
TGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTT
CGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCTA
TCGCACGAAACGACCCATCGGGCTTATCAGCGCACAGTACGACAGCTTGCTGCAGCCGCA
CACGATCTTCAGCGGAAGCACCGGCAGCAGAACCTGGACACCAGCCGGCGGAGTCCGGCA
GGATGGCGGTGTGCCGCTGCTCGATGCGCTCGGGTACAGGTGTGGAACAGTGCTACCGGG
TCCGCCGAGCATCAGATGCATTTCCACCACCAGCTGGCTTGGCAGATCAACTCGTCCTCG
AAGGTTGAAGTCACGGTACAAACGTTAAAAAAAGAGAAATAATANTAACCAGGCATGTGA
AACCTCGGGGGCA

consensusID : consensus_7344#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence

                              [TCGCGAGGNTATCTCGACGTCGAAAATACGGATNGTTGAAAGCGGCGCCACCCANCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGGCGAATCGAGCCAGCGGGAGTNCCAAATTTACGGAGATCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAACGACTGTGTGAACTAGTGTGTATTCTCTGTTCCTGCTGAGAGTGTTTNACTTTTATTATAGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCT]

[+] EMBL AL932373             [TCGCGAGGNTATCTCGACGTCGAAAATACGGATNGTTGAAAGCGGCGCCACCCANCGGCAGCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGGCTCTACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGGCGAATCGAGCCAGCGGGAGTNCCAAATTTACGGAGATCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAACGACTGTGTGAACTAGTGTGTATTCTCTGTTCCTGCTGAGAGTGTTTNACTTTTATTATAGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGATTCGTCAGCT]




>consensus_7344#1
TCGCGAGGNTATCTCGACGTCGAAAATACGGATNGTTGAAAGCGGCGCCACCCANCGGCA
GCAACGACTGCACTGAACCAAGTGTCCCAAAACACCGGTCCAGCGGGGCGGGTTGGTCTG
CTGTGTTCCGAATTTGGGAAATCGAAATCTTACCCGTGCGGTGTTGCAATAATAAGGCTC
TACCGAGTCAGAATCATCTCTTACCCCGCTTTTGAGTTTGGCGAATCGAGCCAGCGGGAG
TNCCAAATTTACGGAGATCGCATTTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGT
GTGGAACCGTGCCGAAGGGCGAACGACTGTGTGAACTAGTGTGTATTCTCTGTTCCTGCT
GAGAGTGTTTNACTTTTATTATAGGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGA
TGAGTGTGCTGCTAAGGAACCAGAGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACG
TTCATCCCAACGTGCGGGTACGATTCGTCAGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7344#0      AATCCCCGAGGTTNCCTTTGGCAGCATACAGCAGCAGGTTTTTAGCAAAGGTCCGTATCG 60
consensus_7344#1      ------------------------------------------------------------
                                                                                  

consensus_7344#0      GATGATACTTTGGAGATGGAAATTTCCCCTCTCCACGGTGAACAGTGTCTCGACGTCGAA 120
consensus_7344#1      -----------------------------------TCGCGAG-GNTATCTCGACGTCGAA 24
                                                           * **    * *************

consensus_7344#0      AATACGGATCGTTGAAAGCGGCGCCACCCAGCGGCAGCAACGACTGCACTGAACCAAGTG 180
consensus_7344#1      AATACGGATNGTTGAAAGCGGCGCCACCCANCGGCAGCAACGACTGCACTGAACCAAGTG 84
                      ********* ******************** *****************************

consensus_7344#0      TCCCAAAACACCGGTCCCAGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATC 240
consensus_7344#1      TCCCAAAACACCGGTCC-AGCGGGGCGGGTTGGTCTGCTGTGTTCCGAATTTGGGAAATC 143
                      ***************** ******************************************

consensus_7344#0      GAAATCTTACCCGTGCGGTGTTGCAATAATAAG-CTCTACCGAGTCAGAATCATCTCTTA 299
consensus_7344#1      GAAATCTTACCCGTGCGGTGTTGCAATAATAAGGCTCTACCGAGTCAGAATCATCTCTTA 203
                      ********************************* **************************

consensus_7344#0      CCCCGCTTTTGAGTTTG-CGAATCGA-CCAGCGGGAGTACCAAATTTACGGAG-TCGCAT 356
consensus_7344#1      CCCCGCTTTTGAGTTTGGCGAATCGAGCCAGCGGGAGTNCCAAATTTACGGAGATCGCAT 263
                      ***************** ******** *********** ************** ******

consensus_7344#0      TTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAA 416
consensus_7344#1      TTCAAGGTAGCCATCGTGCGTCGTGTTTTGTGCGTGTGTGGAACCGTGCCGAAGGGCGAA 323
                      ************************************************************

consensus_7344#0      G---TGTGTGAA-TAGTGT-TGTATTTTGTTCCTGCTGAGAGTGTTTTACTTTTATTT-- 469
consensus_7344#1      CGACTGTGTGAACTAGTGTGTATTCTCTGTTCCTGCTGAGAGTGTTTNACTTTTATTATA 383
                          ******** ****** * *  * ******************** *********   

consensus_7344#0      GGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAG 529
consensus_7344#1      GGAGGAAAAATTGCGCATCCTGCGTAGAGAGTGACGATGAGTGTGCTGCTAAGGAACCAG 443
                      ************************************************************

consensus_7344#0      AGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGA 589
consensus_7344#1      AGTCAGCTGTTCGGCATGAACCGCTGCTACCGCAACGTTCATCCCAACGTGCGGGTACGA 503
                      ************************************************************

consensus_7344#0      TTCGTCAGCTATCGCACGAAACGACCCATCGGGCTTATCAGCGCACAGTACGACAGCTTG 649
consensus_7344#1      TTCGTCAGCT-------------------------------------------------- 513
                      **********                                                  

consensus_7344#0      CTGCAGCCGCACACGATCTTCAGCGGAAGCACCGGCAGCAGAACCTGGACACCAGCCGGC 709
consensus_7344#1      ------------------------------------------------------------
                                                                                  

consensus_7344#0      GGAGTCCGGCAGGATGGCGGTGTGCCGCTGCTCGATGCGCTCGGGTACAGGTGTGGAACA 769
consensus_7344#1      ------------------------------------------------------------
                                                                                  

consensus_7344#0      GTGCTACCGGGTCCGCCGAGCATCAGATGCATTTCCACCACCAGCTGGCTTGGCAGATCA 829
consensus_7344#1      ------------------------------------------------------------
                                                                                  

consensus_7344#0      ACTCGTCCTCGAAGGTTGAAGTCACGGTACAAACGTTAAAAAAAGAGAAATAATANTAAC 889
consensus_7344#1      ------------------------------------------------------------
                                                                                  

consensus_7344#0      CAGGCATGTGAAACCTCGGGGGCA 913
consensus_7344#1      ------------------------