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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7432#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1603 fasta sequence
[CCGCTGGCGTAGTACACGTGGTGTGCGCAGCAAAACTTCCACTGACCAGTCCGCGACCGCTAGTAGCGTTTCTGTCTTTGCCGTTCCCTGTGCCTTCACCGCAGATAGTTGGCCGGATGTCCGATGTGTGTAATGTGCGCTGAGTGAAGAGGAAAAATACCCCGCAACCGTTTCGCTTACAGGCCGCTTTGCCGGTGTGTTTTTGTGCTGCAGATGCACCATCAGTGCAAGTCTGTCTAATGATCAAATCAGTGTACTGAAAGTAAGGCGTGTGGGTGTTTTGTTGAAAATTTAAAAAAAAATAGCAGTGAGAGTATGTGTTGAAGACCAGCCGTATCTAAATGTGTGCAGTGTGCGTCTAAACGAGGGTGGTGTGTAGGCATTTGGTGCAAGCTACAATTCCTGTATCGCAGATCTCGACGAAAGTGCATTTGGAGGTTTTTTTCGGAGGTAGCAATTGAGTTCTAAAACTTGCACAGTAGCGCACCACGAGTACGGGAGAGCTGGAGGGGAGCTAAAAGTGTACCATTCCACGTGGATGTGATTATTGATTTAAAGCAAAAAAGGGAAGCAATCACACGTGTCGGCAAGTGAGAGTCTATTTTCGTCCGATCAGCAAGAAGCCAGACGATTCTGTGGTAGTGTATGTGTGTCTGTGTTTGTGTGTGCAAGTTTGTTCATTTGTGTGGTTGCCGTACAGTGCCAGGAAGCGTTGTTCGTGGGAGAGTAAATAGCAGAAAATCAATCAAAAAGAGCCGCCAGTTTAGAGCGAGGAACATAGCCAGTGTCGCCATAGTTGGTGAAAAATCAGTGAAATTCCGGACCCACCTGTGAAGTCCTGTGCTGGACAGGAAGTTCCGGTTGGGTAGGCGTGAGCGAAAGTGAGATAGAGAGAAAAAGAGTCACTCAAAAGGCAGAAGGGAAGGCAACGCTGACCCAATCCTTTTTAGAGATCGACTCAACGTCCTCGAAAACCGTCTTCATGTATAAGTTCTTCGTGAATTCCAGTGTTAAGTACATAATCAAGTAGAAGCGACTGTTCAATTGCGCGAGAGGCTGTGTGTGTGTGAGAGAGAGTGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTACAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCACCCCAACTGGACACAGCTGCTTGTACCGGCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCACAACGGATTTCATGTGTAAAGCGGCAGCGACCGGGAAGAATACGCTCCTGCTCGATAACAACAAACGTGTCCGTTCGTTTTTCCGCAAACCGCGCTACACGCACTTCTGCTCCGTCTGGTACATCATAGAGGGACGGTCCGGCACGAGGAAAACACCGCACGACCCGTTTGTCTGTATCGCTCGCACTACCACCCGGTCCAGCAGCATCCGTGAAAAGCCCGTAGAAGCTGACTCCGGCCACCACAGCCCTGTTTAGAACCTGAAGCGATTGCCTCCTAGCCCTCGATCAGCACTCGTTCAGTGTAGTTCAGGAT]
[+] EMBL BM589688 [CCGCTGGCGTAGTACACGTGGTGTGCGCAGCAAAACTTCCACTGACCAGTCCGCGACCGCTAGTAGCGTTTCTGTCTTTGCCGTTCCCTGTGCCTTCACCGCAGATAGTTGGCCGGATGTCCGATGTGTGTAATGTGCGCTGAGTGAAGAGGAAAAATACCCCGCAACCGTTTCGCTTACAGGCCGCTTTGCCGGTGTGTTTTTGTGCTGCAGATGCACCATCAGTGCAAGTCTGTCTAATGATCAAATCAGTGTACTGAAAGTAAGGCGTGTGGGTGTTTTGTTGAAAATTTAAAAAAAAATAGCAGTGAGAGTATGTGTTGAAGACCAGCCGTATCTAAATGTGTGCAGTGTGCGTCTAAACGAGGGTGGTGTGTAGGCATTTGGTGCAAGCTACAATTCCTGTATCGCAGATCTCGACGAAAGTGCATTTGGAGGTTTTTTTCGGAGGTAGCAATTGAGTTCTAAAACTTGCACAGTAGCGCACCACGAGTACGGGAGAGCTGGAGGGGAGCTAAAAGTGTACCATTCCACGTGGATGTGATTATTGATTTAAAGCAAAAAAGGGAAGCAATCACACGTGTCGGCAAGTGAGAG ]
[+] EMBL BX623225 [ CACTGACCAGTCCGCGACCGCTAGTAGCGTTTCTGTCTTTGCCGTTCCCTGTGCCTTCACCGCAGATAGTTGGCCGGATGTCCGATGTGTGTAATGTGCGCTGAGTGAAGAGGAAAAATACCCCGCAACCGTTTCGCTTACAGGCCGCTTTGCCGGTGTGTTTTTGTGCTGCAGATGCACCATCAGTGCAAGTCTGTCTAATGATCAAATCAGTGTACTGAAAGTAAGGCGTGTGGGTGTTTTGTTGAAAATTAAAAAAAAAATAGCAGTGAGAGTATGTGTTGAAGACCAGCCGTATCTAAATGTGTGCAGTGTGCGTCTAAACGAGGGTGGTGTGTAGGCATTTGGTGCAAGCTACAATTCCTGTATCGCAGATCTCGACGAAAGTGCATTTGGAGGTTTTTTTCGGAGGTAGCAATTGAGTTCTAAAACTTGCACAGTAGCGCACCACGAGTACGGGAGAGCTGGAGGGGAGCTAAAAGTGTACCATTCCATGTGGATGTGATTATTGATTTAAAGCAAAAAAGGGAAGCAATCACACGTGTCGGCAAGTGAGAGTCTATTTTCGTCCGATCAGCAAGAAGCCAGACGATTCTGTGGTAGTGTAT ]
[+] EMBL BM610034 [ ccgGTTTTTGTGCTGCAGATGCACCATCAGTGCAAGTCTGTCTAATGATCAAATCAGTGTACTGAAAGTAAGGCGTGTGGGGGGTTTGTTGAAAATTTAAAAAAAAATAGCAGTGAGAGTATGTGTTGAAGACCAGCCGTATCTAAATGTGTGCAGTGTGCGTCTAAACGAGGGTGGTGTGTAGGCATTTGGTGCAAGCTACAATTCCTGTATCGCAGATCTCGACGAAAGTGCATTTGGAGGTTTTTTTCGGAGGTAGCAATTGAGTTCTAAAACTTGCACAGTAGCGCACCACGAGTACGGGAGAGCTGGAGGGGAGCTAAAAGTGTACCATTCCACGTGGATGTGATTATTGATTTAAAGCAAAAAAGGGAAGCAATCACACGTGTCGGCAAGTGAGAGTCTATTTTCGTCCGATCAGCAAGAAGCCAGACGATTCTGTGGTAGTGTATGTGTGTCTGTGTTTGTGTGTGCAAGTTTGTTCATTTGTGTGGTTGCCGTACAGTGCCAGGAAGCGTTGTTCGTGGGAGAGTAAATAGCAGAAAATCAATCAAAAAGAGCCGCCAGTTTAGAGCGAGGAACATAGCCAGTGTCGCCATAGTTGGTGAAAAATCAGTGAAA ]
[+] EMBL BX629259 [ AACATAGCCAGTGTCGCCATAGTTGGTGAAAAATCAGTGAAATTCCGGACCCACCTGTGAAGTCCTGTGCTGGACAGGAAGTTCCGGTTGGGTAGGCGTGAGCGAAAGTGAGATAGAGAGAAAAAGAGTCACTCAAAAGGCAGAAGGGAAGGCAACGCTGACCCAATCCTTTTTAGAGATCGACTCAACGTCCTCGAAAACCGTCTTCATGTATAAGTTCTTCGTGAATTCCAGTGTTAAGTACATAATCAAGTAGAAGCGACTGTTCAATTGCGCGAGAGGCTGTGTGTGTGTGAGAGAGAGTGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTACAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCACCCCAACTGGACACAGCTGCTTGTACCGGCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCACAACGGATTTCATGTGTAAAGCGGCAGCGACCGGGAAGAATACGCTCCTGCTCGATAACAACAAACGTGTCCGTTCGTTTTTCCGCAAACCGCGCTACACGCACTTCTGCTCCGTCTGGTACATCATAGAGGGACGGTCCGGCACGAGGAAAACACCGCACGACCCGTTTGTCTGTATCGCTCGCACTACCACCCGGTCCAGCAGCATCCGTGAAAAGCCCGTAGA ]
[+] EMBL BX629151 [ CAGTGTCGCCATAGTTGGTGAAAAATCAGTGAAATTCCGGACCCACCTGTGAAGTCCTGTGCTGGACAGGAAGTTCCGGTTGGGTAGGCGTGAGCGAAAGTGAGATAGAGAGAAAAAGAGTCACTCAAAAGGCAGAAGGGAAGGCAACGCTGACCCAATCCTTTTTAGAGATCGACTCAACGTCCTCGAAAACCGTCTTCATGTATAAGTTCTTCGTGAATTCCAGTGTTAAGTACATAATCAAGTAGAAGCGACTGTTCAATTGCGCGAGAGGCTGTGTGTGTGTGAGAGAGAGTGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTACAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCACCCCAACTGGACACAGCTGCTTGTACCGGCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCACAACGGATTTCATGTGTAAAGCGGCAGCGACCGGGAAGAATACGCTCCTGCTCGATAACAACAAACGTGTCCGTTCGTTTTTCCGCAAACCGCGCTACACGCACTTCTGCTCCGTCTGGTACATCATAGAGGGACGGTCCGGCACGAGGAAAACACCGCACGACCCGTTTGTCTGTATCGCTCGCACTACCACCCGGTCCAGCAGCATCCGTGAAAAGCCCGTAGA ]
[+] EMBL BM610823 [ ccgGTGTGTGTGAGAGA GTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCT TGTACAGCAGAAAAGGCTCGTGTGAGGCGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCACCCCAACTGGACACAGCTGCGTGTACC GCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCACAACGGATTTCATGTGTAAAGCGGCAGCGACCGGGAAGAATACGCTCCTGCTCGATAACAACAAACGTGTCCGTTCGTTTTTCCGCAAACCGCGCTACACGCACTTCTGCTCCGTCTGGTACATCATAGAGGGACGGTCCGGCACGAGGAAAACACCGCACGACCCGTTTGTCTGTATCGCTCGCACTATCACCCGGTCCAGCAGCATCCGTG AAAGCCCGTAGAAGCTGACTCCGGCCACCACAGCCCTGTTTAGAACCTGAAGCGATTGCCTCCTAGCCCTCGATCAGCACTCGTTCAGTGTAGTTCAGGAT]
consensusID : consensus_7432#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence
[GGCAGAATCNCCACGAGGTAATTGCGCGAGAGGCTGTGTGTCGTGTGAGAGAGAGTGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTACAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCANCCCAACTGGACACAGCTGCTTGTACCGGGCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCAGCAACGGATTTCACTGTGTATAAGCGGCGAGGCGAACCGGGGAAGAATACGCTCCTGGGCGTCGGATAACGAGACACATACGGTGGTCCGCTGTACGGNATTTTCCGGNGAAACCGCGGCTTACAACGGCGACTTCTGNCGTCCG]
[+] EMBL BX467701 [GGCAGAATCNCCACGAGGTAATTGCGCGAGAGGCTGTGTGTCGTGTGAGAGAGAGTGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTACAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAACACTCTCCCANCCCAACTGGACACAGCTGCTTGTACCGGGCCACGCAACACTTTCCATTTTTCTTCCATTTTCCATTCCGACCGTACCCTCCAGCAACGGATTTCACTGTGTATAAGCGGCGAGGCGAACCGGGGAAGAATACGCTCCTGGGCGTCGGATAACGAGACACATACGGTGGTCCGCTGTACGGNATTTTCCGGNGAAACCGCGGCTTACAACGGCGACTTCTGNCGTCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7432#0 CCGCTGGCGTAGTACACGTGGTGTGCGCAGCAAAACTTCCACTGACCAGTCCGCGACCGC 60
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 TAGTAGCGTTTCTGTCTTTGCCGTTCCCTGTGCCTTCACCGCAGATAGTTGGCCGGATGT 120
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 CCGATGTGTGTAATGTGCGCTGAGTGAAGAGGAAAAATACCCCGCAACCGTTTCGCTTAC 180
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AGGCCGCTTTGCCGGTGTGTTTTTGTGCTGCAGATGCACCATCAGTGCAAGTCTGTCTAA 240
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 TGATCAAATCAGTGTACTGAAAGTAAGGCGTGTGGGTGTTTTGTTGAAAATTTAAAAAAA 300
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AATAGCAGTGAGAGTATGTGTTGAAGACCAGCCGTATCTAAATGTGTGCAGTGTGCGTCT 360
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AAACGAGGGTGGTGTGTAGGCATTTGGTGCAAGCTACAATTCCTGTATCGCAGATCTCGA 420
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 CGAAAGTGCATTTGGAGGTTTTTTTCGGAGGTAGCAATTGAGTTCTAAAACTTGCACAGT 480
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AGCGCACCACGAGTACGGGAGAGCTGGAGGGGAGCTAAAAGTGTACCATTCCACGTGGAT 540
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 GTGATTATTGATTTAAAGCAAAAAAGGGAAGCAATCACACGTGTCGGCAAGTGAGAGTCT 600
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 ATTTTCGTCCGATCAGCAAGAAGCCAGACGATTCTGTGGTAGTGTATGTGTGTCTGTGTT 660
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 TGTGTGTGCAAGTTTGTTCATTTGTGTGGTTGCCGTACAGTGCCAGGAAGCGTTGTTCGT 720
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 GGGAGAGTAAATAGCAGAAAATCAATCAAAAAGAGCCGCCAGTTTAGAGCGAGGAACATA 780
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 GCCAGTGTCGCCATAGTTGGTGAAAAATCAGTGAAATTCCGGACCCACCTGTGAAGTCCT 840
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 GTGCTGGACAGGAAGTTCCGGTTGGGTAGGCGTGAGCGAAAGTGAGATAGAGAGAAAAAG 900
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AGTCACTCAAAAGGCAGAAGGGAAGGCAACGCTGACCCAATCCTTTTTAGAGATCGACTC 960
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AACGTCCTCGAAAACCGTCTTCATGTATAAGTTCTTCGTGAATTCCAGTGTTAAGTACAT 1020
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 AATCAAGTAGAAGCG--ACTGTTCAATTGCGCGAGAGGCTGTGTGT-GTGTGAGAGAGAG 1077
consensus_7432#1 -----GGCAGAATCNCCACGAGGTAATTGCGCGAGAGGCTGTGTGTCGTGTGAGAGAGAG 55
* **** * ** ********************** *************
consensus_7432#0 TGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTA 1137
consensus_7432#1 TGTGTGCAACAGGAAGTGGAGTAAAGGTCAAATCAAAGGAAAAGCTCACCCTTGTGTGTA 115
************************************************************
consensus_7432#0 CAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAAC 1197
consensus_7432#1 CAGCAGAAAAGGCTCGTGCGAGACGCACGTGCTAGTTTTCCCTAGAGAGAAAGAGAGAAC 175
************************************************************
consensus_7432#0 ACTCTCCCACCCCAACTGGACACAGCTGCTTGTACCGG-CCACGCAACACTTTCCATTTT 1256
consensus_7432#1 ACTCTCCCANCCCAACTGGACACAGCTGCTTGTACCGGGCCACGCAACACTTTCCATTTT 235
********* **************************** *********************
consensus_7432#0 TCTTCCATTTTCCATTCCGACCGTACCCTCCA-CAACGGATTTCA-TGTGTA-AAGCGGC 1313
consensus_7432#1 TCTTCCATTTTCCATTCCGACCGTACCCTCCAGCAACGGATTTCACTGTGTATAAGCGGC 295
******************************** ************ ****** *******
consensus_7432#0 A--GCGACC--GGGAAGAATACGCTCCTGCTCGATA-ACAACAA-ACGTGTCCGTTCGTT 1367
consensus_7432#1 GAGGCGAACCGGGGAAGAATACGCTCCTGGGCGTCGGATAACGAGACACATACGGTGGT- 354
**** * ****************** ** * *** * ** * ** * **
consensus_7432#0 TTTCCGCAAACCGCGCTACACGCACTTCTGCTCCGTCTGGTACATCATAGAGGGACGGTC 1427
consensus_7432#1 ----------CCGCTGTACGGNATTTTCCGGNGAAACCGCGGC-TTACAACGGCGACTTC 403
**** *** *** * * * * * * * ** **
consensus_7432#0 CGGCACGAGGAAAACACCGCACGACCCGTTTGTCTGTATCGCTCGCACTACCACCCGGTC 1487
consensus_7432#1 TGNCGTCCG--------------------------------------------------- 412
* * *
consensus_7432#0 CAGCAGCATCCGTGAAAAGCCCGTAGAAGCTGACTCCGGCCACCACAGCCCTGTTTAGAA 1547
consensus_7432#1 ------------------------------------------------------------
consensus_7432#0 CCTGAAGCGATTGCCTCCTAGCCCTCGATCAGCACTCGTTCAGTGTAGTTCAGGAT 1603
consensus_7432#1 --------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||