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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7453#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 786 fasta sequence
[GGCCGTTGCCTCAGTTGCGATTAGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCTTTGCGGTATGGATTTCTATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCC-TCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGTCGGTGGCGGGACATCAGGACATTTGCGTCGAAGGTGCCATCCAGTTCCGTGACTCGTTCAACCCGATCAACAAGTAAACCAAAAAAAAAAAAGAAACAATGCCATCCATCGCAAACGGTACAATAAACAACAACGTGGATGCGAAAAAAAA]
[+] EMBL BX629061 [GGCCGTTGCCTCAGTTGCGATTAGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCTTTGCGGTATGGATTTCTATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCT T GACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCC TCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACATCCAGCTGAAGGAGTCGGTGGCGGGACATCAGGACATTTGCGTCGAAGGTGCCATCCAGTTCCGTGACTCGTTCAACC ]
[+] EMBL BM600115 [ ccgCCGTGTGCTCCGGACGCAGACGCGCTTCTTTGCGGTATGGATTTCTATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCC TCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGTCGGTGGCGGGACATCAGGA ]
[+] EMBL AF513637 [ TATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGCGAACACCTGAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCC TCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGCAGGAGTCGGTGGCGGGACATCAGGACATTTGCGTCGAAGGTGCCATCCAGTTCCGTGACTCGTTCAACCCGAT ]
[-] EMBL AGA283683 [ TGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCCTTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACAACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGTCGGTGGCGGGACATCAGGACATTTGCGTCGAAGGTGCCATCCAGTTCCGTGACTCGTTCAACCCGATCAACAAGTAAACCAAAAAAAAAAAAGAAACAATGCCATCCATCGCAAACGGTACAATAAACAACAACGTGGATGCGAAAAAAAA]
consensusID : consensus_7453#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 626 fasta sequence
[CCGCGGACGCGTGGGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCTTTGCGGTATGGATTTCTATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCCTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGT]
[+] EMBL BM613630 [CCGCGGACGCGTGGGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCTTTGCGGTATGGATTTCTATCACCTTCCCCTGTCGGCCCCGTGCCAATCGATCCGTCTGTTGGCCAAAGCGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCTGTTGAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCCTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCTCAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGT]
[+] EMBL AGA284972 [ GAAAGGTGAACATCTTAAACCGGAGTTCCTGAAGATCAACCCACAACACACCGTCCCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAATCGAGAGCGATCCTGACGTACCTGTGCGAAAAGTACGGCAAAAACGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAACCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCCGGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCTCGAGTTTTTGGAAAGCTTCCTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGTTGCCGATTTCAGTCTGCTGACGAGCATCACAACCATCGACGTGACGGCCGGGCACGATC ]
consensusID : consensus_7453#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 339 fasta sequence
[AAGGCAGAATCCGCACGANTGTATCTTTCCTGTGTGCTCCGGNCGCAGACGCGCTTCTTCGCGGTATGGATTTCTATCACCTTACCCCTGGTCGGCCCCGTGCCAATCGATCCGTCTGTATGGCCAAAGCTGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCGTGTTGAAAGGCGAACACCGTGAAACCGGAGTTCCTGAAGATCAAGCNCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAAGTCGAGAGCGATCCTGACGTACCTGTGCGAAGAAGTACGGCGAAAAAGCGACGGNCGTCGTANTCCGAAGGAGT]
[+] EMBL BX468005 [AAGGCAGAATCCGCACGANTGTATCTTTCCTGTGTGCTCCGGNCGCAGACGCGCTTCTTCGCGGTATGGATTTCTATCACCTTACCCCTGGTCGGCCCCGTGCCAATCGATCCGTCTGTATGGCCAAAGCTGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCGTGTTGAAAGGCGAACACCGTGAAACCGGAGTTCCTGAAGATCAAGCNCCACAACACACCGTACCGACGCTGGTCGACAATGACTTTGTGCTGTGGGAAGTCGAGAGCGATCCTGACGTACCTGTGCGAAGAAGTACGGCGAAAAAGCGACGGNCGTCGTANTCCGAAGGAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7453#0 GGCCGTTGCCTCAGTTGCGATTAGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCT 60
consensus_7453#1 --------CCGCGGACGCG-TGGGGTTCTTTCCGTGTGCTCCGGACGCAGACGCGCTTCT 51
consensus_7453#2 --AAGGCAGAATCCGCACGANTGTATCTTTCCTGTGTGCTCCGGNCGCAGACGCGCTTCT 58
** * ** * *********** ***************
consensus_7453#0 TTGCGGTATGGATTTCTATCACCTTCCCCT--GTCGGCCCCGTGCCAATCGATCCGTCTG 118
consensus_7453#1 TTGCGGTATGGATTTCTATCACCTTCCCCT--GTCGGCCCCGTGCCAATCGATCCGTCTG 109
consensus_7453#2 TCGCGGTATGGATTTCTATCACCTTACCCCTGGTCGGCCCCGTGCCAATCGATCCGTCTG 118
* *********************** *** ****************************
consensus_7453#0 T-TGGCCAAAGC-GCTCGGTCTACATTTGAACCTAAAGGAGGTCGACC-TGTTGAAAGGT 175
consensus_7453#1 T-TGGCCAAAGC-GCTCGGTCTACATTTGAACCTAAAGGAGGTCGACC-TGTTGAAAGGT 166
consensus_7453#2 TATGGCCAAAGCTGCTCGGTCTACATTTGAACCTAAAGGAGGTCGACCGTGTTGAAAGGC 178
* ********** *********************************** **********
consensus_7453#0 GAACATCTT-AAACCGGAGTTCCTGAAGATCAA--CCCACAACACACCGTACCGACGCTG 232
consensus_7453#1 GAACATCTT-AAACCGGAGTTCCTGAAGATCAA--CCCACAACACACCGTACCGACGCTG 223
consensus_7453#2 GAACACCGTGAAACCGGAGTTCCTGAAGATCAAGCNCCACAACACACCGTACCGACGCTG 238
***** * * *********************** ************************
consensus_7453#0 GTCGACAATGACTTTGTGCTGTGGGAA-TCGAGAGCGATCCTGACGTACCTGTGCGAA-A 290
consensus_7453#1 GTCGACAATGACTTTGTGCTGTGGGAA-TCGAGAGCGATCCTGACGTACCTGTGCGAA-A 281
consensus_7453#2 GTCGACAATGACTTTGTGCTGTGGGAAGTCGAGAGCGATCCTGACGTACCTGTGCGAAGA 298
*************************** ****************************** *
consensus_7453#0 AGTACGGCAAAAA--CGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAA 348
consensus_7453#1 AGTACGGCAAAAA--CGACGGCCTCTATCCGAAGGATCCGAAAAAGCGTGCCGTCGTGAA 339
consensus_7453#2 AGTACGGCGAAAAAGCGACGGNCGTCGT------ANTCCGAAGGAGT------------- 339
******** **** ****** * * ****** **
consensus_7453#0 CCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCC 408
consensus_7453#1 CCAGCGCCTGTACTTCGACATGGGCACGCTGTACCAGCGGTTCTCGCAAGCCTTCTACCC 399
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 GGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCT 468
consensus_7453#1 GGTCATGATGGAGGGCAAGGAGCTGAACCCCGAACTGGTGGTGAAGCTAGACGAAGCGCT 459
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 CGAGTTTTTGGAAAGCTTCCTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGT 528
consensus_7453#1 CGAGTTTTTGGAAAGCTTCCTCGACAAAACACCCTTCGCTGCGGGCGATAAGCTAACGGT 519
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 TGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCT 588
consensus_7453#1 TGCCGATTTCAGTCTGCTGACGAGCATCACTACCATCGACGTGACGGCCGGGCACGATCT 579
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 CAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGTCGGTGGCGGGACA 648
consensus_7453#1 CAGCAAGTACGCCAACATTCAGCGTTGGTACAGCCAGCTGAAGGAGT------------- 626
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 TCAGGACATTTGCGTCGAAGGTGCCATCCAGTTCCGTGACTCGTTCAACCCGATCAACAA 708
consensus_7453#1 ------------------------------------------------------------
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 GTAAACCAAAAAAAAAAAAGAAACAATGCCATCCATCGCAAACGGTACAATAAACAACAA 768
consensus_7453#1 ------------------------------------------------------------
consensus_7453#2 ------------------------------------------------------------
consensus_7453#0 CGTGGATGCGAAAAAAAA 786
consensus_7453#1 ------------------
consensus_7453#2 ------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||