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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7463#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1113 fasta sequence
[CCGCCCACGCGTCCGGTAACCTCGTACCGATTCTTGTACGCCCTCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGGTGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCACCATCCCTCGCCCGCGACCCTTGCCTCTCCGGCGGCGCCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTCAATGCACAGGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCTCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGACCGGCACCGCAGCAGATTGCCCGCCCGGGACCGATCGCAGCGCCGCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGGACGAGGACCGCCGGCCCGCCCCGCACCAGCAGGCGGCCCGCCCGCACACGCAGCAGGACCAGGACCGGCAGCGCAAGCCGGTCGCGCAGATCCTGCGCAAGTGGCGCGAGGAGCACGAG]
[+] EMBL BM636401 [CCGCCCACGCGTCCGGTAACCTCGTACCGATTCTTGTACGCCCTCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGGTGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCA ]
[+] EMBL BM654922 [ ccgGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCACCATCCCTCGCCCGCGACCCTTGCCTCTCCGGCGGCGCCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTC ]
[+] EMBL BM625720 [ ccGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCACCATCCCTCGCCCGCGACCCTTGCCTCTCCGGCGGCGCCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTCAATGCACAGGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCTCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGACCGGCACCGCAGCAGATTGCCCGCCCGGGACCGA ]
[+] EMBL BX609781 [ CCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTCAATGCACAGGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCTCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGACCGGCACCGCAGCAGATTGCCCGCCCGGCACCGATCGCAGCGCCGCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGGACGAGGACCGCCGGCCCGCCCCGCACCAGCAGGCGGCCCGCCCGCACACGCAGCAGGACCAGGACCGGCAGCGCAAGCCGGTCGCGCAGATCCTGCGCAAGTGGCGCGAGGAGCACGAG]
consensusID : consensus_7463#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 717 fasta sequence
[GACCCACGCGTCCGGTCTGGAACGGTTTGCAAGTAACCTCGTACCGATTCTTGTACGCCCTCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGGTGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCCCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGGCCGGCACCGCAGCAGATCGCCCGCCCGGCACCGATCGCAGCGCCGCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGGACGAGGACCGCCGGGCCGCTCCCGCACCAGCAGGCGGGC]
[+] EMBL BM620126 [GACCCACGCGTCCGGTCTGGAACGGTTTGCAAGTAACCTCGTACCGATTCTTGTACGCCCTCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGGTGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCCCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGGCCGGCACCGCAGCAGATCGCCCGCCCGGCACCGATC ]
[+] EMBL BM630411 [ CCGGTCTGGAACGGTTTGCAAGTAACCTCGTACCGATTTTTGTACGCCCTCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGGTGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCGGGTGAAAAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATAT AGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCTCGGTTCCCGGCCGAGCGGCCCCAGCC GCAGCAGCAGCAGCAGCAACCCACCCCGAAGCAGTACCGACCGGCACCGCAGCAGATTGCCCGCCCGGCACCGATCGCAGCGCCGCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGGACGAGGACCGCCGGGCCGCTCCCGCACCAGCAGGCGGGC]
consensusID : consensus_7463#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence
[CCGCCCACGCGTCCGGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCATCCCTCGCCCGCGACCCTTGCCTCTCCGGCGGCACCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTCATGCACAGGGAAAACC]
[+] EMBL BM639196 [CCGCCCACGCGTCCGGTTCGATAGCAGGTGAACAAGAGTGCATTTTGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGTGAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCTACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAGCCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGATACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGGGCGCGGTGCGCATCGCCGCCCCGAACGCCATCCACCACCAACTGCCGTCCGCCCTTCCCAAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGACGACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCATCCCTCGCCCGCGACCCTTGCCTCTCCGGCGGCACCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCGATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCTCGCTTCATGCACAGGGAAAACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7463#0 -----------------CCGCCCACGCGTCCGGTAACCTCGTACCGATTCTTGTACGCCC 43
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 GACCCACGCGTCCGGTCTGGAACGGTTTGCAAGTAACCTCGTACCGATTCTTGTACGCCC 60
consensus_7463#0 TCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGG 103
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 TCCCACCCGTGGGCAATAGTGCGTGTGAAGGGAAGAAAGAAAACTTCGTTTGGTTCGTGG 120
consensus_7463#0 TGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTT 163
consensus_7463#2 ------------CCGCCCACGCGTCCG---GTTCGATAGCAGGTGAACAAGAGTGCATTT 45
consensus_7463#1 TGAGCTTAGTGAAGGAGAAAGTGAACAAACGTTCGATAGCAGGTGAACAAGAGTGCATTT 180
* * * * * ******************************
consensus_7463#0 TGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGT 223
consensus_7463#2 TGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGT 105
consensus_7463#1 TGTGTGGCATAGAACAGAACGGCGGAAATCAGTTTTGTGTTTTGCTTTTGCTGACGCAGT 240
************************************************************
consensus_7463#0 GAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCT 283
consensus_7463#2 GAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCT 165
consensus_7463#1 GAAAGCATTTGCGGGGAGAAACGATATAAGTTCGTGTGCAGTTACAGTTTACACTCGTCT 300
************************************************************
consensus_7463#0 ACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAG 343
consensus_7463#2 ACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAG 225
consensus_7463#1 ACAGGATGAAATATACGCTAGCTTTGCTTCCCCTGGCGGGACTCATCACCCTAGCGACAG 360
************************************************************
consensus_7463#0 CCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGA 403
consensus_7463#2 CCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGA 285
consensus_7463#1 CCCAGTACGGTCCGGCCCCGCCGAGGCTGAACATCCCCGGCGCCATCCCGCTGCCGCCGA 420
************************************************************
consensus_7463#0 TACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGG 463
consensus_7463#2 TACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAGTAATACGCGTGCGGCGTCCGG 345
consensus_7463#1 TACGCGAGGAGCGGCTGCTCCCGCAGCAGTCACCGCAAG-AAAAC-CGGCCGGCACC--G 476
*************************************** ** ** ** **** * *
consensus_7463#0 GCGCGGTGCGCATCGCCGCCCCGAACGCCA-TCCACCACCAACTGCCGTCCGCCCTTCCC 522
consensus_7463#2 GCGCGGTGCGCATCGCCGCCCCGAACGCCA-TCCACCACCAACTGCCGTCCGCCCTTCCC 404
consensus_7463#1 ATCCAGCGCGC-CCAGATCCCGGAGCGCTTCTTCGCCACCGACAAGGAACCGGCCCGGTT 535
* * **** * *** ** *** * * ***** ** *** **
consensus_7463#0 AAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGAC 582
consensus_7463#2 AAATTCCACGACATCCCGAGCACGGTCGAGCACAAGCCGGTGACCGAGGAGCCGGAGGAC 464
consensus_7463#1 CCCGGCCGAGCGGCCCCAGCCGCAGC--AGCAGCAGC-AGCAGCAACCCACCCCGAAGCA 592
** * *** * * * **** *** * * * ** ** *
consensus_7463#0 GACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCACCATCCCTCGCCC 642
consensus_7463#2 GACTTCCGACCCGCCTTCATCCCGCAGCTCCAACAACCCCACCACCA---TCCCTCGCCC 521
consensus_7463#1 G--TACCGGCCGGCACC---GCAGCAGATC--GCCCGCCCGGCACCG--ATCGCAGCGCC 643
* * *** ** ** * **** ** * *** **** ** * **
consensus_7463#0 GCGACCCTTGCCTCTCCGGCGGCGCCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCG 702
consensus_7463#2 GCGACCCTTGCCTCTCCGGCGGCACCGTCCCCGGCCGCCTCCCCGGCCCTGCAGTTCCCG 581
consensus_7463#1 GCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGG-ACGAGGACCGCCGGGCCGCTCCCG 702
** * * * * ** ** ** * ** * * * *** ** * *****
consensus_7463#0 ATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCT 762
consensus_7463#2 ATCCCGGCGGACGAGCAGCCGAGCGAGCGCGACCGCGAACTACAGCAAAATGTTCTCTCT 641
consensus_7463#1 -CACCAGCAGGCGGGC-------------------------------------------- 717
** ** * ** **
consensus_7463#0 CGCTTCAATGCACAGGAAAACCGGCCGGCACCGATCCAGCGCGCCCAGATCCCGGAGCGC 822
consensus_7463#2 CGCTTCA-TGCACAGGGAAAACC------------------------------------- 663
consensus_7463#1 ------------------------------------------------------------
consensus_7463#0 TTCTTCGCCACCGACAAGGAACCGGCTCGGTTCCCGGCCGAGCGGCCCCAGCCGCAGCAG 882
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 ------------------------------------------------------------
consensus_7463#0 CAGCAGCAGCAACCCACCCCGAAGCAGTACCGACCGGCACCGCAGCAGATTGCCCGCCCG 942
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 ------------------------------------------------------------
consensus_7463#0 GGACCGATCGCAGCGCCGCAGCAGTCGTTCCGCCAGCAGCAGCACTTCCAGGACGAGGAC 1002
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 ------------------------------------------------------------
consensus_7463#0 CGCCGGCCCGCCCCGCACCAGCAGGCGGCCCGCCCGCACACGCAGCAGGACCAGGACCGG 1062
consensus_7463#2 ------------------------------------------------------------
consensus_7463#1 ------------------------------------------------------------
consensus_7463#0 CAGCGCAAGCCGGTCGCGCAGATCCTGCGCAAGTGGCGCGAGGAGCACGAG 1113
consensus_7463#2 ---------------------------------------------------
consensus_7463#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||