cluster # 747

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Anopheles gambiae
cluster # 747 cluster # 747 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_747#0 length = 597 sequences # 1

consensus_747#1 length = 423 sequences # 1

consensusID : consensus_747#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence

                              [GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATCCGCTGCTAACGCCACCACCGCTCGTAGGAAACAACAATGGAGGCGCTTGGTACCCGGGATATCCGGGATATCCAATCCTTACACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAACGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGTATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCATTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAGG]

[+] EMBL AL934624             [GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATCCGCTGCTAACGCCACCACCGCTCGTAGGAAACAACAATGGAGGCGCTTGGTACCCGGGATATCCGGGATATCCAATCCTTACACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAACGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGTATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCATTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAGG]




>consensus_747#0
GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTG
AAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGAT
CCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGC
CAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACC
GTCCACGCCGTACTGGAACGCAAACCCCTGGGATCCGCTGCTAACGCCACCACCGCTCGT
AGGAAACAACAATGGAGGCGCTTGGTACCCGGGATATCCGGGATATCCAATCCTTACACC
GCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAACGCC
AACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGTATCC
GGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCATTCA
GCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAGG

consensusID : consensus_747#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 423
fasta sequence

                              [GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTCGTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAATAATCCCAAATCGCCTTTAACAACCCGGGCAACACCGGNGGGGGCAGGGCGGAATGGGTATTCCAAGTCAAGGCGAAGTA]

[+] EMBL AL932651             [GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTCGTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAATAATCCCAAATCGCCTTTAACAACCCGGGCAACACCGGNGGGGGCAGGGCGGAATGGGTATTCCAAGTCAAGGCGAAGTA]




>consensus_747#1
GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAG
TGTTTGGCGATCTTTTTGGCAGCTATCCTGTGCTCGATAGCCGAAGGAAACAAGATCCGA
TGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAAT
AATGGGCTAGATCTGAATGCGCTGAGCTACAACCAACCTACCCGATACTGACACCGTCCA
CGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTCGTAGG
AAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAATAATCCCAAATCGCCTT
TAACAACCCGGGCAACACCGGNGGGGGCAGGGCGGAATGGGTATTCCAAGTCAAGGCGAA
GTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_747#0      GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTG 60
consensus_747#1      ---GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTG 57
                          * **     *    *****************************************

consensus_747#0      AAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGAT 120
consensus_747#1      AAGTGTTTGGCGATCTTTTTGGCAGCTATCCTG-TGCTCGATAGCCGAAGGAAACAAGAT 116
                     ********************************* **************************

consensus_747#0      CCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGC 180
consensus_747#1      CCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGC 176
                     ************************************************************

consensus_747#0      CAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACC 240
consensus_747#1      CAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACC-AACCTACCCGATACTGACACC 235
                     ************************************** *********************

consensus_747#0      GTCCACGCCGTACTGGAACGCAAACCCCTGGGAT-CCGCT-GCTAACGCCACCACCGCTC 298
consensus_747#1      GTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTC 295
                     ********************************** ***** ********** ** *****

consensus_747#0      GTAGGAAACAACAATGGAGGCGCTTG-GTACCCGGGA-TATCCGGGATATCCAATCCTTA 356
consensus_747#1      GTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAA---TAATCCC-A 351
                     ************************** ********** *********     *****  *

consensus_747#0      CACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAA 416
consensus_747#1      AATCGCC----TTTAACAACCCGGGCAACA-CCGGNGGGGGC---AGGGCGGAATGGGTA 403
                      * ****    **   *  *   ** * **  * *  *   *    ** *  * **   *

consensus_747#0      CGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGT 476
consensus_747#1      TTCCAA-GTCAAGGCGAAGTA--------------------------------------- 423
                       ****   *   *    * *                                       

consensus_747#0      ATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCA 536
consensus_747#1      ------------------------------------------------------------
                                                                                 

consensus_747#0      TTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAG 596
consensus_747#1      ------------------------------------------------------------
                                                                                 

consensus_747#0      G 597
consensus_747#1      -