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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1283 fasta sequence
[CCGGGCCAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTAAAGGTACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCGAAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAGTGCAAGTAAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCAGGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGCGTGTTCACTGTTT-GATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACC-TTTTTGAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAG-AGTAAGACTTCTTTCGGTAGTGATTAATCGTT-AGTTACACACGTGTTACAGCTACTACGAGTGACAGCTAGTTCTTTCGTGTTAGGATGTACTTTGTATAACAACTCCATTTTCTTATACCGTTCTAAGTGTTTTGTGCCGAGT-TGGGTTGATGTTCAACTAAAACCATCCCTCG-TTTACCCAGACAGACAGATAAGAACAGTAGTTAACATGTACCCGAACATTGATCGTACAATTAAAGTCAATCGACCGACCAACCAA-CAA-CAA-CAATCATAACAATATG-AT-AG-AACAGAACATAGTGTGCAAACAAGCGCCTGCCTCTAACAATCAACGCA--TTTGTAGATGAA-TTAAGCCCGTACNGA-TCCGAAGCAATGCAAA---ACTGAAGGAATGA-TTAGCAGAGGGGACATCCGCGATGCTGCAACCAGGGCAAGCTAAACACGCGCACGCACCCTACTCTGGTCCTCCACATCGTGGTCATTTGATGGCAGCTGGAGAGGGAACGTGGCAGAAAGATACGTAGAAGAACCTTTTGTAACCTTCAAACGAAAGTGTATAGAACTATAACTATATATATTAACAAGTGCCTATTTATTGTTGTAATACTGACGCAACACACATTTGCATTCTATGTTCTCTTTTTCTACCAATTGTTTTTATTTCCTTTTTTC]
[+] EMBL BM611895 [CCGGGCCAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTAAAGGTACGACGGACCGTCACGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCGAAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAGTGCAAGTAAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCAGGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGTGTGTTCACTGTTT GATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACC TTTTTAAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAG AGTAAGACTTCTTTCGGTAGTGATTAATCGTT AGTTACAC ]
[+] EMBL BX622577 [ TATTTATAAACAAGCAAACGGTTGAATGAAGGTACAGGCACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCGAAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAGTGCAAGTAAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCAGGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGCGTGTTCACTGTTT GATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACC TTTTTGAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAG AGTAAGACTTCTTTCGGTAGTGATTAATCGTT AGTTACACACGTGTTACAGCTACTACGAGTGACAGCTAGTTCTTTCGTGTTANGATGTACTTTGTATAACAACTCCATTTTCTTATACCGTTCTAAGTGTTTTGTGCCGAGT TGGGTTGATGNTCAACTAAAACCATCCCTCG TTTACCCAGACAGACAGATAAGAACAGTAGTTAACATGTACCCGAA ATT ]
[+] EMBL BX628145 [ CCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCGAAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAGTGCAAGTAAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCAGGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGCGTGTTCACTGTTT GATCGCTCTGTAAGTAGNGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACC TTTTTGAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAG AGTAAGAC ]
[+] EMBL BX628255 [ GTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCGAAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAGTGCAAGTAAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCAGGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGCGTGTTCACTGTTT GATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACC TTTTTGAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAG AGTAAGACTTCTTTCGGTAGTGATTAATCGTT AGTTACACACGTGTTACAGCTACTACGAGTG ]
[+] EMBL AL931984 [ TTGTGCAAGCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACACGCGTGTTCACTGTTTGGATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAACTAAAACAAATGAAAACTATTCTACTAGCAACCTTTTTTGAAACACTCACGCAGTAGTAACAATCGTGTGTTTCCTTTTTTCAAACTAGAGCAGTAAGACTTCTTTCGGTAGTGATTAATCGTTCAGTTACACACGTGTTACAGCTACTACGAGTGACAGCTAGTTCTTTCGTGTNAGGATGTACTTTGTATAACAACTCCATTTTCTTATACCGTTCTAAGTGTTTCGTGCCGAGTNTGGGTTGATGTTCAACTAAAAGCATCCCTCGNTTTACCCAGACAGACAGATAAGAACAGTAGTTAACATGTACCCGAACATTGATCGTACAATTAAAGTCAATCGACCGACCAACCAA CAA CAA CAATCATAACAATATGCATCAGCAACAGAACATAGTGTGCAAACAAGCGCCTGCCTCTAACAATCAACGCA TTTGTAGATGAA TTAAGCCCGTACNGACTCCGAAGCAATGCAAACANACTGAAGGAATGACTTAGC ]
[+] EMBL BX614902 [ CTTCTTTCGGTAGTGATTAATCGTT AGTTACACACGTGTTACAGCTACTACGAGTGACAGCTAGTTCTTTCGTGTTAGGATGTACTTTGTATAACAACTCCATTTTCTTATACCGTTCTAAGTGTTTTGTGCCGAGT TGGGTTGATGTTCAACTAAAACCATCCCTCG TTTACCCAGACAGACAGATAAGAACAGTAGTTAACATGTACCCGAACATTGATCGTACAATTAAAGTCAATCGACCGACCAACCAACCAACCAACCAATCATAACAATATG AT AG AACAGAACATAGTGTGCAAACAAGCGCCTGCCTCTAACAATCAACGCATTTTTGTAGATGAATTTAAGCCCGTACTGA TCCGAAGCAATGCAAA AATGAAGGAATGA TTAGCAGAGGGGACATCCGCGATGCTGCAACCAGGGCAAGCTAAACACGCGCACGCACCCTACTCTGGTCCTCCACATCGTGGTCATTTGATGGCAGCTGGAGAGGGAACGTGGCAGAAAGATACGTAGAAGAACCTTTTGTAACCTTCAAACGAAAGTGTATAGAACTATAACTATATATATTAACAAGTGCCTATTTATTGTTGTAATACTGACGCAACACACATTTGCATTCTATGTTCTCTTTTTCTACCAATTGTTTTTATTTCCTTTTTTC]
consensusID : consensus_7489#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 544 fasta sequence
[AGGCAGATCGNCCACGAGNGNAATTGTTAAAAGAAAGTGAAGAAACAGAAGGACAACGAACCTACTCTTGGCAAAGGCTAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTACAGGCACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCCGAAAGGCAGCAAAAATACTCACCGGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAAGTGCAAGTAAAACAAACCCCGTTAAATCCAGAAATGAAACAGCGCACACATGNCAATTACTTGTCACACGATTGCCATTACCAATTGCCAGGTTGGAAGAGAGGGGAGCAGAGAAAGCGTTAGNTTCATTGTATGGTTAGTTAAACACCGGTATGTTAGTGGCAAAGGCAAGGTTAAGGTTGAAACTTTGGGT]
[+] EMBL AL696710 [AGGCAGATCGNCCACGAGNGNAATTGTTAAAAGAAAGTGAAGAAACAGAAGGACAACGAACCTACTCTTGGCAAAGGCTAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTACAGGCACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCTATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCCGAAAGGCAGCAAAAATACTCACCGGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAATTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAAGTGCAAGTAAAACAAACCCCGTTAAATCCAGAAATGAAACAGCGCACACATGNCAATTACTTGTCACACGATTGCCATTACCAATTGCCAGGTTGGAAGAGAGGGGAGCAGAGAAAGCGTTAGNTTCATTGTATGGTTAGTTAAACACCGGTATGTTAGTGGCAAAGGCAAGGTTAAGGTTGAAACTTTGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7489#0 ------------------------------------------------------------
consensus_7489#1 AGGCAGATCGNCCACGAGNGNAATTGTTAAAAGAAAGTGAAGAAACAGAAGGACAACGAA 60
consensus_7489#0 ------------CCGGGCCAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTAAAG 48
consensus_7489#1 CCTACTCTTGGCAAAGGCTAAGATATTTATAAACAAGCAAACGGTTGAATGAAGGTACAG 120
*** ************************************** **
consensus_7489#0 GTACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCT 108
consensus_7489#1 GCACGACGGACCGTCAAGTGTTGATGCAGATGGATTTTTAAACAAACGAACCTCCTTCCT 180
* **********************************************************
consensus_7489#0 ATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGC-G 167
consensus_7489#1 ATAATAACAGAGCGTTACTACCTAAAATACTTAATGTTATAGAGCGCAAATAGTGTGCCG 240
********************************************************** *
consensus_7489#0 AAAGGCAGCAAAAATACTCACCGCGAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAA 227
consensus_7489#1 AAAGGCAGCAAAAATACTCACCG-GAGTGTGTGATTGTGAGTTATTAAATGTTGTGCTAA 299
*********************** ************************************
consensus_7489#0 TTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAA-GTGCAAGT 286
consensus_7489#1 TTTTACTAATTACTTACTGTAGAGCAAGCAGTAGAACGCTAGCAGTTACAAAGTGCAAGT 359
*************************************************** ********
consensus_7489#0 AAACAACCCGTTAATCCAGAATGAAAAGGAAATGCAATACTGTAAGATGCATACAATGCA 346
consensus_7489#1 AAAACA------AACCCCGTTAAATCCAGAAATGAAACAGCGCA---CACATGNCAATTA 410
*** * ** ** * * ****** ** * * * *** * *
consensus_7489#0 GGTGAGAGAGGGAGAGAGAAAGCGTTAGTTATGTTGTTGTTAACACCGTTTGTTGTGCAA 406
consensus_7489#1 CTTGTCACACG---ATTGCCATTACCAATTGCCAGGTTGGAAGAGAGGGGAGCAGAGAAA 467
** * * * * * * * ** **** * * * * * **
consensus_7489#0 GCAGTTTGTTTGAATTGTGAAACTTTGAATTTGAACTAATTGTGTAACACCATCGCGACA 466
consensus_7489#1 GC-GTTAGNTTCA-TTGTATGGTT----AGTTAAAC-ACCGGTATGTTA--GTGGCAA-A 517
** *** * ** * **** * * ** *** * ** * * * ** * *
consensus_7489#0 CGCGTGTTCACTGTTTGATCGCTCTGTAAGTAGTGCAATAATTTGAAACGTAAGACAAAC 526
consensus_7489#1 GGCAAGGTTAAGGTTGAAACTTTGGGT--------------------------------- 544
** * * * *** * * * **
consensus_7489#0 TAAAACAAATGAAAACTATTCTACTAGCAACCTTTTTGAAACACTCACGCAGTAGTAACA 586
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 ATCGTGTGTTTCCTTTTTTCAAACTAGAGAGTAAGACTTCTTTCGGTAGTGATTAATCGT 646
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TAGTTACACACGTGTTACAGCTACTACGAGTGACAGCTAGTTCTTTCGTGTTAGGATGTA 706
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 CTTTGTATAACAACTCCATTTTCTTATACCGTTCTAAGTGTTTTGTGCCGAGTTGGGTTG 766
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 ATGTTCAACTAAAACCATCCCTCGTTTACCCAGACAGACAGATAAGAACAGTAGTTAACA 826
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TGTACCCGAACATTGATCGTACAATTAAAGTCAATCGACCGACCAACCAACAACAACAAT 886
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 CATAACAATATGATAGAACAGAACATAGTGTGCAAACAAGCGCCTGCCTCTAACAATCAA 946
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 CGCATTTGTAGATGAATTAAGCCCGTACNGATCCGAAGCAATGCAAAACTGAAGGAATGA 1006
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TTAGCAGAGGGGACATCCGCGATGCTGCAACCAGGGCAAGCTAAACACGCGCACGCACCC 1066
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TACTCTGGTCCTCCACATCGTGGTCATTTGATGGCAGCTGGAGAGGGAACGTGGCAGAAA 1126
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 GATACGTAGAAGAACCTTTTGTAACCTTCAAACGAAAGTGTATAGAACTATAACTATATA 1186
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TATTAACAAGTGCCTATTTATTGTTGTAATACTGACGCAACACACATTTGCATTCTATGT 1246
consensus_7489#1 ------------------------------------------------------------
consensus_7489#0 TCTCTTTTTCTACCAATTGTTTTTATTTCCTTTTTTC 1283
consensus_7489#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||