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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7491#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1639 fasta sequence
[CACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGCGTTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATATTGCAACACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGCTTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCGGCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGACACTGTACATGGACCGGGAGGCACAGATCAAGGCGATCGAGAAAACGTTCGAGGACAACACCAAGCCGATCACGACGCACTACAGCAAGCCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAAGGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGGAAGTATCCGTGCGCGCAGGTCATTTTCGATTCGGATCCGGCCCCGAGCGGCAAGAACGTGCCGGCCCAGATCGAGGAGATGTCGCAGGCCATGATTCGGGGCGTGATGGACGAGAGTCGCGAGCAGTTCGTGGCGTACTTCCTGCCGACGGACGATACGCTCGAGAAGCGGCGCCGCGATCTGGTCAACGAAACACTGTACGAGGATGAGGAGGAGTACGAGTACAAGATGGCCCGCGAGTACAACTGGAACGTGAAGAGCAAGGCGTCGAAGGGGTACGAGGAAAACTACTACCTCGTGCTGCGCCCGGACGGTATCTACTACAACGAGCTGGAGACGCGCGTCCGGCTGAGCAAGCGTCGGCAGAAGAACGCTCAGCAGCAGAGCAACACGAAGCTGGTGGTGAAGCATCGCCCGCTCAATGCTTCCGAGCACCGTATGCCAGC-TATCGCGAGCGGCAGCTTGAGCCGGCCGGCGAAGAGGACGACGAAGACATCGAGGAGGAAGAGGAAGAGGAGGACGACGAGGAGGAAGCGCAAGCAAGCCAGACGCAGGCGGGCGAAGGCAAGGGCGGAGATGGTAAGGACGATGAAAAGGCGAAGCGCGAAAGTCGGGATAGAAGTCGTTCGGGCAGCCGGTCGCGGTCCAGATCGCAGGGATCGAA-CGTTCCGGCTCGTCGCGATCCAGATCAAGATCCGGTACCAGATCTCAGTCGAGATCCGTTTCGAGAAGTCGCAGCCGATCAAAGTCGGGCAGCCGTAGCCGCAGCCGCAGCGGTTCGGGTAGTCGCAGTCGCAGCGGATCTAGAAGTCGTTCGCCAACTCGCAGCCGCAGTCGCAGCGTTTCTCGCTCACGTTCCCGATCTGGATCGCAGCGCGGATCGGCATCCCGTTCGCGATCTCGTTCCCGGTCCGGGTCTCGGTCCCGCTCCCGGTCTCGCTCGCGTTCGGGCTCGCGTTCGGGCTCCCGTTCGGCATCTGGATCACGCAGCGTTCCGGCACTCCCGACGCAGGTTCGCGCAGTGGATCGGCCAGCCGTTCGGGCAGTGAATCGGAATAAGTTCTACGCGAAAGCGCAAGCCCTTTTTATATTTCTATGCAATACAATAAACAACACTTCG]
[+] EMBL CNS08OTH [CACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGCGTTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATATTGCAACACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGCTTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCGGCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGACACTGTACATGGACCGGGAGGCACAGATCAAGGCGATCGAGAAAACGTTCGAGGACAACACCAAGCCGATCACGACGCACTACAGCAAGCCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAAGGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGGAAGTATCCGTGCGCGCAGGTCATTTTCGATTCGGATCCGGCCCCGAGCGGCAAGAACGTGCCGGCCCAGATCGAGGAGATGTCGCAGGCCATGATTCGGGGCGTGATGGACGAGAGTCGCGAGCAGTTCGTGGCGTACTTCCTGCCGACGGACGATACGCTCGAGAAGCGGCGCCGCGATCTGGTCAACGAAACACTGTACGAGGATGAGGAGGAGTACGAGTACAAGATGGCCCGCGAGTACAACTGGAACGTGAAGAGCAAGGCGTCGAAGGGGTACGAGGAAAACTACTACCTCGTGCTGCGCCCGGACGGTATCTACTACAACGAGCTGGAGACGCGCGTTCGGCTGAGCAAGCGTCGGCAGAAG ]
[-] EMBL CNS09REH [ CGCCCGGACGGTATCTACTACAACGAGCTGGAGACGCGCGTCCGGCTGAGCAAGCGTCGGCAGAAGAACGCTCAGCAGCAGAGCAACACGAAGCTGGTGGTGAAGCATCGCCCGCTCAATGCTTCCGAGCACCGTATGCCAGC TATCGCGAGCGGCAGCTTGAGCCGGCCGGCGAAGAGGACGACGAAGACATCGAGGAGGAAGAGGAAGAGGAGGACGACGAGGAGGAAGCGCAAGCAAGCCAGACGCAGGCGGGCGAAGGCAAGGGCGGAGATGGTAAGGACGATGAAAAGGCGAAGCGCGAAAGTCGGGATAGAAGTCGTTCGGGCAGCCGGTCGCGGTCCAGATCGCAGGGATCGAA CGTTCCGGCTCGTCGCGATCCAGATCAAGATCCGGTACCAGATCTCAGTCGAGATCCGTTTCGAGAAGTCGCAGCCGATCAAAGTCGGGCAGCCGTAGCCGCAGCCGCAGCGGTTCGGGTAGTCGCAGTCGCAGCGGATCTAGAAGTCGTTCGCCAACTCGCAGCCGCAGTCGCAGCGTTTCTCGCTCACGTTCCCGATCTGGATCGCAGCGCGGATCGGCATCCCGTTCGCGATCTCGTTCCCGGTCCGGGTCTCGGTCCCGCTCCCGGTCTCGCTCGCGTTCGGGCTCGCGTTCGGGCTCCCGTTCGGCATCTGGATC ]
[-] EMBL CNS08OTI [ aaACGCGCGTCCGGCTGAGCAAGCGTCGGCAGAAGAACGCTCAGCAGCAGAGCAACACGAAGCTGGTGGTGAAGCATCGCCCGCTCAATGCTTCCGAGCACCGTATG CAGCGTATCGCGAGCGGCAGCTTGAGCCGGCCGGCGAAGAGGACGACGAAGACATCGAGGAGGAAGAGGAAGAGGAGGACGACGAGGAGGAAGCGCAAGCAAGCCAGACGCAGGCGGGCGAAGGCAAGGGCGGAGATGGTAAGGACGATGAAAAGGCGAAGCGCGAAAGTCGGGATAGAAGTCGTTCGGGCAGCCGGTCGCGGTCCAGATCGCAGGGATCGAA CGTTCCGGCTCGTCGCGATCCAGATCAAGATCCGGTACCAGATCTCAGTCGAGATCCGTTTCGAGAAGTCGCAGCCGATCAAAGTCGGGCAGCCGTAGCCGCAGCCGCAGCGGTTCGGGTAGTCGCAGTCGCAGCGGATCTAGAAGTCGTTCGCCAACTCGCAGCCGCAGTCGCAGCGTTTCTCGCTCACGTTCCCGATCTGGATCGCAGCGCGGATCGGCATCCCGTTCGCGATCTCGTTCCCGGTCCGGGTCTCGGTCCCGCTCCCGGTCTCGCTCGCGTTCGGGCTCGCGTTCGGGCTCCCGTTCGGCATCTGGATCACGCAGCGTTCCGGCACTCCCGACGCAGGTTCGCGCAGTGGATCGGCCAGCCGTTCGGGCAGTGAATCGGAATAAGTTCTACGCGAAAGCGCAAGCCCTTTTTATATTTCTATGCAATACAATAAACAACACTTCG]
[-] EMBL CNS09H40 [ AGGCGAAGCGCGAAAGTCGGGATAGAAGTCGTTCGGGCAGCCGGTCGCGGTCCAGATCGCAGGGATCGAACCGTTCCGGCTCGTCGCGATCCAGATCAAGATCCGGTACCAGATCTCAGTCGAGATCCGTTTCGAGAAGTCGCAGCCGATCAAAGTCGGGCAGCCGTAGCCGCAGCCGCAGCGGTTCGGGTAGTCGCAGTCGCAGCGGATCTAGAAGTCGTTCGCCAACTCGCAGCCGCAGTCGCAGCGTTTCTCGCTCACGTTCCCGATCTGGATCGCAGCGCGGATCGGCATCCCGTTCGCGATCTCGTTCCCGGTCCGGGTCTCGGTCCCGCTCCCGGTCTCGCTCGCGTTCGGGCTCGCGTTCGGGCTCCCGTTCGGCATCTG ]
consensusID : consensus_7491#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 688 fasta sequence
[CCGCAGCGGTCCACAATAACAGCGCGGAGCAAAGTGCGATAAGTTTTGTTACAATTACCAAATAATTGCCACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGCGTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATACTGCAACACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGCTTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCGGCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGGACATTCACACGCCGCAGGACTCGATGCGCAGCAGCCGCCATGCGAAGAGCGTGTCCTGGTTGCGGAAGTCGGAGTACATCTCGACCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAAGGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGGACCGGGAGGCACAGATCAAGGCGATCGAGAAAACGTTCGAGGACAACACCAAGCCGATCACGACGCACTACAGCAAGCCGGGCGTGACGCCGGTCGAGATCATGCC]
[+] EMBL BM632852 [CCGCAGCGGTCCACAATAACAGCGCGGAGCAAAGTGCGATAAGTTTTGTTACAATTACCAAATAATTGCCACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGCGTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATACTGCAACACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGCTTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCGGCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGGACATTCACACGCCGCAGGACTCGATGCGCAGCAGCCGCCATGCGAAGAGCGTGTCCTGGTTGCGGAAGTCGGAGTACATCTCGACCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAAGGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGGACCGGGAGGCACAGATCAAGGCGATCGAGAAAACGTTCGAGGACAACACCAAGCCGATCACGACGCACTACAGCAAGCCGGGCGTGACGCCGGTCGAGATCATGCC]
[+] EMBL CNS09H3Z [ TGATAAGCTTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATATTGCAACACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGCTTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCGGCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGGACATTCACACGCCGCA GACTCGATGCGCA CAGCCGCCATGCGAAGAGCGTGTCCTGGTTGCGGAAGTCGGAGTACATCTCGACCGAGCAGACGCGCTTCAACCCGCAGACGAT ]
[+] EMBL CNS09REG [ TTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAGCACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7491#0 ------------------------------------------------------------
consensus_7491#1 CCGCAGCGGTCCACAATAACAGCGCGGAGCAAAGTGCGATAAGTTTTGTTACAATTACCA 60
consensus_7491#0 ---------CACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGC 51
consensus_7491#1 AATAATTGCCACCAACGATGGCGCCGACCGTGCAAAACGGTGCGAACGGAGCTGATAAGC 120
***************************************************
consensus_7491#0 GTTCCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATATTGCAAC 111
consensus_7491#1 GT-CCCGTTCGTCAGCAGGAGCGCAGGTCGGAGCTAATTTCCCGGGTGAAATACTGCAAC 179
** ************************************************** ******
consensus_7491#0 ACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGC 171
consensus_7491#1 ACGCTGCCGGACATTCCGTTCGATCTGAAGTTCATCACGTACCCGTTCGAGAATGACCGC 239
************************************************************
consensus_7491#0 TTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAG 231
consensus_7491#1 TTCATCCAGTACAATCCGACCTCGCTGGAGCGGAACTATCGCTACGAGGTGCTTACCGAG 299
************************************************************
consensus_7491#0 CACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCG 291
consensus_7491#1 CACGACCTGGGCGTCACCATCGATCTGATCAACCGGGACCTGTACCAGATCGACCATTCG 359
************************************************************
consensus_7491#0 GCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGACACTGTACATGGACCGGGAG 351
consensus_7491#1 GCCCAGCTCGATCCGGCCGACGAGAAGCTGCTCGAGGAGGACATTCACACG--CCGCAGG 417
*************************************** * *** * *** *
consensus_7491#0 GCACAGATCAAGGCGATCGAGAAAACGTTCGAGGACAACA-CCAAGCCGATCACGACGCA 410
consensus_7491#1 ACTCGATGCGCAGCAGCCGC-----CATGCGAAGAGCGTGTCCTGGTTGCGGAAGTCGGA 472
* * * ** ** * * *** ** ** * * * * ** *
consensus_7491#0 CTACAGCAAG-CCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAA 469
consensus_7491#1 GTACATCTCGACCGAGCAGACGCGCTTCAACCCGCAGACGATGGAAAAGGTGGAGGCGAA 532
**** * * *************************************************
consensus_7491#0 GGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGGAAGTATCCGT 529
consensus_7491#1 GGTGGGTTTCAACGTGAAGAAGAGTCTGCGCGAGGAGACACTGTACATGG----ACCGGG 588
************************************************** * * *
consensus_7491#0 GCGCGCAGGTCATTTTCGATTCGGATCCGGCCCCGAGCGGCAAGAACGTGCCGGCCCAGA 589
consensus_7491#1 AGGCACAGATCAAGG-CGATCGAGAAAACGTTC-GAG-GACAACACCAAGCCGATCACGA 645
** *** *** **** ** * * *** * *** * * **** * **
consensus_7491#0 TCGAGGAGATGTCGCAGGCCATGATTCGGGGCGTGATGGACGAGAGTCGCGAGCAGTTCG 649
consensus_7491#1 CGCACTACAGCAAGCCGGGCGTGACGCCGGTCGAGATC-ATGCC---------------- 688
* * * ** ** * *** * ** ** *** * *
consensus_7491#0 TGGCGTACTTCCTGCCGACGGACGATACGCTCGAGAAGCGGCGCCGCGATCTGGTCAACG 709
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 AAACACTGTACGAGGATGAGGAGGAGTACGAGTACAAGATGGCCCGCGAGTACAACTGGA 769
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 ACGTGAAGAGCAAGGCGTCGAAGGGGTACGAGGAAAACTACTACCTCGTGCTGCGCCCGG 829
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 ACGGTATCTACTACAACGAGCTGGAGACGCGCGTCCGGCTGAGCAAGCGTCGGCAGAAGA 889
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 ACGCTCAGCAGCAGAGCAACACGAAGCTGGTGGTGAAGCATCGCCCGCTCAATGCTTCCG 949
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 AGCACCGTATGCCAGCTATCGCGAGCGGCAGCTTGAGCCGGCCGGCGAAGAGGACGACGA 1009
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 AGACATCGAGGAGGAAGAGGAAGAGGAGGACGACGAGGAGGAAGCGCAAGCAAGCCAGAC 1069
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 GCAGGCGGGCGAAGGCAAGGGCGGAGATGGTAAGGACGATGAAAAGGCGAAGCGCGAAAG 1129
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 TCGGGATAGAAGTCGTTCGGGCAGCCGGTCGCGGTCCAGATCGCAGGGATCGAACGTTCC 1189
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 GGCTCGTCGCGATCCAGATCAAGATCCGGTACCAGATCTCAGTCGAGATCCGTTTCGAGA 1249
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 AGTCGCAGCCGATCAAAGTCGGGCAGCCGTAGCCGCAGCCGCAGCGGTTCGGGTAGTCGC 1309
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 AGTCGCAGCGGATCTAGAAGTCGTTCGCCAACTCGCAGCCGCAGTCGCAGCGTTTCTCGC 1369
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 TCACGTTCCCGATCTGGATCGCAGCGCGGATCGGCATCCCGTTCGCGATCTCGTTCCCGG 1429
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 TCCGGGTCTCGGTCCCGCTCCCGGTCTCGCTCGCGTTCGGGCTCGCGTTCGGGCTCCCGT 1489
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 TCGGCATCTGGATCACGCAGCGTTCCGGCACTCCCGACGCAGGTTCGCGCAGTGGATCGG 1549
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 CCAGCCGTTCGGGCAGTGAATCGGAATAAGTTCTACGCGAAAGCGCAAGCCCTTTTTATA 1609
consensus_7491#1 ------------------------------------------------------------
consensus_7491#0 TTTCTATGCAATACAATAAACAACACTTCG 1639
consensus_7491#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||