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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1239 fasta sequence
[GTATTTTTTTATTCTATTTTAAAAAAAAACCACTACAAAGAAAACCCCCCAAAGCCCTCACATTGAGCAACACAGAGCTTAGCTCTTGGACAGAAATTCTCGCATGACCTGGTTGACCAGCTCCGGGTTGTGCTGCTGCAGGAAGTGATCAACACCGGGCACGACACGGAACTCCAGATTCTCAAACTCCTGCTGCATCAGCGGTCCCGACTCCTTCGAGATGTACAGATCCTTCTCGCCGATCAGGTACAGCCCGGGAGCGAACGTTTTCGGCCGCGGTGGCATCTGCCGCCTCGTGAAGAAGCGGAAATTCTGGCGATAGTAGTTGATCGGGTACGTCATGCCGTGCGGTTTGGAGAACGTGTACTTGAACGCCTCGATCACGTCCGGCCCACCGTGGTGGCGGAACACCACCTCGAACAGGTGGAAGTCCATCAGACGCACGAAGAACTCCGGCAGCCAGGGCATTTGGTAGAAGAAGATGTACCAGGACATCTTGAACTGGGTTTTGCTGGTGGAGAACAGCTTCCGGGCAATCTTCTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATC-TCCATGTGTTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTGCGCAAACATTCCGGCGGCACGGGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGACGAGCAGCACCAGCAGACCGAACAGCACCCGGCAGCTGTAGAACAGGCACAGGGCGTACGACACCACAAACTGGATCGACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGA-TTGGGTTTGGGGACCAACTTACTTGTTCACACAAT-CGCACAAGCGGCATACGACACTTTCTGCGCGATGTGTGTGATGTACCGCGGA-CGCGCGGGCGGACGCGTGGGCGG]
[+] EMBL CNS09K48 [GTATTTTTTTATTCTATTTTAAAAAAAAACCACTACAAAGAAAACCCCCCAAAGCCCTCACATTGAGCAACACAGAGCTTAGCTCTTGGACAGAAATTCTCGCATGACCTGGTTGACCAGCTCCGGGTTGTGCTGCTGCAGGAAGTGATCAACACCGGGCACGACACGGAACTCCAGATTCTCAAACTCCTGCTGCATCAGCGGTCCCGACTCCTTCGAGATGTACAGATCCTTCTCGCCGATCAGGTACAGCCCGGGAGCGAACGTTTTCGGCCGCGGTGGCATCTGCCGCCTCGTGAAGAAGCGGAAATTCTGGCGATAGTAGTTGATCGGGTACGTCATGCCGTGCGGTTTGGAGAACGTGTACTTGAACGCCTCGATCACGTCCGGCCCACCGTGGTGGCGGAACACCACCTCGAACAGGTGGAAGTCCATCAGACGCACGAAGAACTCCGGCAGCCAGGGCATTTGGTAGAAGAAGATGTACCAGGACATCTTGAACTGGGTTTTGCTGGTGGAGAACAGCTTCCGGGCAATCTTCTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATC TCCATGTGCTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTTTGCTAACATTCCGGCGGCGCGGGCC ]
[-] EMBL BX624498 [ AACTCCAGATTCTCAAACTCCTGCTGCATCAGCGGTCCCGACTCNTTCGAGATGTACAGATCNTTCTCGCCGATCAGGTACAGCCCGGGGGCGAACGTTTTCGNCCGCGGTGGCATCTGCCGCCTCGTGAAGAAGCGGAAATTCTGGCGATAGTAGTTGATCGGGTACGTCATGGCGTGCGGTTTGGAGAACGTGTACTTGAACGCCTCGATCACGTCCGGCCCACCGTGGTGGCGGAACACCACCTCGAACAGGTGGAAGTCCATCAGGCGCACGAAGAACTCCGGCAGCCAGGGCATTTGGTAGAAGAAGATGTACCAGGACATCTTGAACTGGGTTTTGCTGGTGGAGAACAGCTTCCGGGCAATCTTCTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATC TCCATGTGTTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTA ]
[-] EMBL CNS09K47 [ CGTTTTCGGCCGCGGTGGCATCTGCCGCCTCGTGAAGAAGCGGAAATTCTGGCGATAGTAGTTGATCGGGTACGTCATGCCGTGCGGTTTGGAGAACGTGTACTTGAACGCCTCGATCACGTCCGGCCCACCGTGGTGGCGGAACACCACCTCGAACAGGTGGAAGTCCATCAGACGCACGAAGAACTCCGGCAGCCAGGGCATTTGGTAGAAGAAGATGTACCAGGACATCTTGAACTGGGTTTTGCTGGTGGAGAACAGCTTCCGGGCAATCTTCTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATC TCCATGTGCTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTGCGCAAACATTCCGGCGGCGCGGGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGATGAGTAGCACCAGCAGACCGAACAGCACCCGGCAGCTGTAGAACAGACACAGGGCGTACGACACCACAAACTGGATCGACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGA TTCGGATTGGGGACCAACTTACTTGTTCACACAAT CGCACAAGCGGCATACGACACTTTCTGCGCGATGTGTGTGATGTACCG ]
[-] EMBL BM619278 [ GGGCAATCTTCTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATCTTCCATGTGTTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTGCGCAAACATTCCGGCGGCACGGGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGACGAGCAGCACCAGCAGACCGAACAGCACCCGGCAGCTGTAGAACAGGCACAGGGCGTACGACACCACAAACTGGATCGACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGATTTGGGTTTGGGGACCAACTTACTTGTTCACACAATCCGCACAAGCGGCATACGACACTTTCTGCGCGATGTGTGTGATGTACGCCGGA CGCGTGGGCGG ]
[-] EMBL BM618417 [ TGTGTTTGGTGATGAAGTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAACTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTACTGGTACTGGGGCTTCTCGGTGTCACCGTACCCGCGCATATCCAACGCCACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCAGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTGCGCAAACAGTCCGGCGGCACGGGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGACGAGCAGCACCAGCAGACCGAACAGCACCCGGCAGCTGTAGAACAGGCACAGGGCGTACGACACCACAAACTGGATCGACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGATTTGGGTTTGGGGACCAACTTACTTGTTCACACAATCCGCACAAGCGGCATACGACACTTTCTGCGCGATGTGTGTGATGTA CGCGGACCGCGCGG ]
[-] EMBL BM644733 [ CGTGCACGAGCACCATGAGCGGTTTGCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTACTCGTGATTGCGCAAACATTCCGGCGGCACGGGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGACGAGCAGCACCAGCAGACCGAACAGCACCCGGCAGCTGTAGAACAGGCACAGGGCGTACGACACCACAAACTGGATCGACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGATTTGGGTTTGGGGACCAACTTACTTGTTCACACAATCCGCACAAGCGGCATACGACACTTTCTGCGCGATGTGTGTGATGTA CGCGGA C CGC GGCGGACGCGTGGGCGG]
consensusID : consensus_7573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence
[CTACTGTCGCACAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTATCTGGTACTGGGGCTTTCGGTGTCACNGTACACCGCGCATATCCACGCACACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGTAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGTCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTAATCGTGAGTTGCGCAAACATTCCGCGGCACGGCCGCTCCTTTGTGGCCCAAAATTTGGTGCCGTTTTGGTGACAGACGCCAAAGGGCCCCCAAACCCAGCAGACCGAAAGCACCCGAGCTGTAGAACAGCACAGGCGTAGAACCACAANTGATGACTCGANAACCTCGGGGAATT]
[-] EMBL AL932299 [CTACTGTCGCACAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTATCTGGTACTGGGGCTTTCGGTGTCACNGTACACCGCGCATATCCACGCACACCACCCAGTAATCTTTGGCGAACTCCTTCAGCTGATGGCGCCACGAGTAACCAAAACTCGGGAAAGCCGTGCACGAGCACCATGAGCGGTTTGTCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGTTCGCATTCTGGTACTTATCGGTGCCGTAATCGTGAGTTGCGCAAACATTCCGCGGCACGGCCGCTCCTTTGTGGCCCAAAATTTGGTGCCGTTTTGGTGACAGACGCCAAAGGGCCCCCAAACCCAGCAGACCGAAAGCACCCGAGCTGTAGAACAGCACAGGCGTAGAACCACAANTGATGACTCGANAACCTCGGGGAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7573#0 GTATTTTTTTATTCTATTTTAAAAAAAAACCACTACAAAGAAAACCCCCCAAAGCCCTCA 60
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CATTGAGCAACACAGAGCTTAGCTCTTGGACAGAAATTCTCGCATGACCTGGTTGACCAG 120
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CTCCGGGTTGTGCTGCTGCAGGAAGTGATCAACACCGGGCACGACACGGAACTCCAGATT 180
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CTCAAACTCCTGCTGCATCAGCGGTCCCGACTCCTTCGAGATGTACAGATCCTTCTCGCC 240
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 GATCAGGTACAGCCCGGGAGCGAACGTTTTCGGCCGCGGTGGCATCTGCCGCCTCGTGAA 300
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 GAAGCGGAAATTCTGGCGATAGTAGTTGATCGGGTACGTCATGCCGTGCGGTTTGGAGAA 360
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CGTGTACTTGAACGCCTCGATCACGTCCGGCCCACCGTGGTGGCGGAACACCACCTCGAA 420
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CAGGTGGAAGTCCATCAGACGCACGAAGAACTCCGGCAGCCAGGGCATTTGGTAGAAGAA 480
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 GATGTACCAGGACATCTTGAACTGGGTTTTGCTGGTGGAGAACAGCTTCCGGGCAATCTT 540
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 CTGCGAGGGTGCGTCCATCATGATGTACCGATCGACCATCTCCATGTGTTTGGTGATGAA 600
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 GTGCCATCCAATCACTGCGCCCCAGTCGTGCGCAACGAGGGTAAACTTTTGACGACCTAA 660
consensus_7573#1 ---------------------------------------------------------CTA 3
*
consensus_7573#0 CTGTCGCACCAGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTA-CTGGT 719
consensus_7573#1 CTGTCGCAC-AGGCACCGGATGTCCTCGGTCATGTTGTCGATCCGATAGGCGTATCTGGT 62
********* ******************************************** *****
consensus_7573#0 ACTGGGGCTTCTCGGTGTCACCGTAC-CCGCGCATATCCAACGCCACCACCCAGTAATCT 778
consensus_7573#1 ACTGGGGCTT-TCGGTGTCACNGTACACCGCGCATATCCACGCACACCACCCAGTAATCT 121
********** ********** **** ************* ****************
consensus_7573#0 TTGGCGAACTCCTTCAGCTGATGGCGCCACGAG-AACCAAAACTCGGGAAAGCCGTGCAC 837
consensus_7573#1 TTGGCGAACTCCTTCAGCTGATGGCGCCACGAGTAACCAAAACTCGGGAAAGCCGTGCAC 181
********************************* **************************
consensus_7573#0 GAGCACCATGAGCGGTTTG-CTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGT 896
consensus_7573#1 GAGCACCATGAGCGGTTTGTCTGCGATCTCCATTCTCCACGAAATGTATCCGTATGCCGT 241
******************* ****************************************
consensus_7573#0 TCGCATTCTGGTACTTATCGGTGCCGTACTCGTGA-TTGCGCAAACATTCCGGCGGCACG 955
consensus_7573#1 TCGCATTCTGGTACTTATCGGTGCCGTAATCGTGAGTTGCGCAAACATTCCG-CGGCACG 300
**************************** ****** **************** *******
consensus_7573#0 GGCCGCTCCTTTGTGGCCCAAAATTTGGTGTGCGGTTTGGTGACGAGCAGCACCAGCAGA 1015
consensus_7573#1 G-CCGCTCCTTTGTGGCCCAAAATTTGGTGC-CGTTTTGGTGACAGAC---GCCAAAGGG 355
* **************************** ** ********* * *** *
consensus_7573#0 CCGAACAGCACCCGGCAGCTGTAGAACAGGCACAGGGCGTACGACACCACAAACTGGATC 1075
consensus_7573#1 CCC--CCAAACCCAGCAGACCGAAAGCA--CCCGAGCTGTAGAACAGCACAGGC---GTA 408
** * **** **** * * ** * * * *** *** **** * *
consensus_7573#0 GACTCGCGGACGTAGTACTGGATCATCGTGCCACACGAACGCACCCGGCCGGGATTGGGT 1135
consensus_7573#1 GAACCACAANTG-ATGACTCGANAACCTCGGGGAATT----------------------- 444
** * * * * *** ** * * * *
consensus_7573#0 TTGGGGACCAACTTACTTGTTCACACAATCGCACAAGCGGCATACGACACTTTCTGCGCG 1195
consensus_7573#1 ------------------------------------------------------------
consensus_7573#0 ATGTGTGTGATGTACCGCGGACGCGCGGGCGGACGCGTGGGCGG 1239
consensus_7573#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||