cluster # 7597

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Anopheles gambiae
cluster # 7597 cluster # 7597 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7597#0 length = 693 sequences # 6

consensus_7597#1 length = 535 sequences # 1

consensusID : consensus_7597#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 693
fasta sequence

                              [GGATATT-TGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAGAGGGAGAGAAAGC-GAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAG-AAACCGCTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGG-TGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAG-AAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGT------GTGTGTGTGTGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTG--TGTGTGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTCATGAAGATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTT]

[+] EMBL CNS09CYK             [GGATATT TGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAGACGGAGAGAAAGC GAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAG AAACCGCTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAA GACATAGCGAA CTGGTTGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAGCAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGTGCGTGAGTGTGTGTGTGTGTGTATCGCGGCGTGTCCCTGCTGGATGCGAATGTG  TGTGTGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTC                                          ]
[+] EMBL BX626160             [ GATATT TGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAGAGGGAGAGAAAGC GAGTGCGATTTGTGCCCAAACCACAATTTGCTACGGAAAAG AAACCACTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGG TGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAG AAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATA  TGTGTGTGT      GTGTGCGTGAGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTGTATGTGTGTGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCC                                                                                                   ]
[+] EMBL CNS09NS8             [    ATTATGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAGAGGGAGAGAAAGCAGAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAGAAAACCGCTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM582677             [                     ccgCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAGAGGGAGAGAAAGC GAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAG AAACCGCTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGG TGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAGCAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGTGCGTGAGTGTGTGTGTGTGTGTATCGCGGCGTGTCCCTGCTGGATGCGAATGTG  TGTGTGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTCATGAAGATT                                 ]
[+] EMBL BM617132             [                                                                 ccgGAAAGC GAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAG AAACCGCTAACCGAGCTCGAGCGACAGTGTGCCCGGGGGCGTTGATTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGG TACCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATA   AAAAAAGAACCTTCCCACCCTGGAGTAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGT      GTGCGTGAGTGTGTGTGTCGCGGCGTGTCCCTGCTGGATACCAATGTG  TGTGAGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTCATGAAGA                                   ]
[+] EMBL BX627385             [                                                                                                                                                         GTGCGTTGCTTATTATTTACCAAATAGAAGAAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTACGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGG TGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAG AAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATA  TGTGTGTGT      GTGTGCGTGAGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTGTATGTGTGTGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTCATGAAGATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTT]




>consensus_7597#0
GGATATTTGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAG
AGGGAGAGAAAGCGAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAGAAACCG
CTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAG
AAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTA
CGAGTACAGACATGTCGTGCTACCGAAGGACATAGCGAAGCTGGTGCCCAAAACACACCT
CATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTA
CATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATA
AGAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCA
GGACGAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGCGGCGTGTCCCTGCTGGAT
ACGAATGTGTGTGTGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTTGCC
AATAGACACCCGGGGAGGCGTGCAACAACATCGCCCCTTGTTGTACGCGTCATGAAGATT
CTGGAAATGTTCAACGCGCCGCGAGCGTCAGTT

consensusID : consensus_7597#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 535
fasta sequence

                              [GCAGAATCGGCACTGTAGGGCGAAGCTGGTGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAGAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGTGTGCGTGAGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTGTATGTGTGTGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACGAACATCGCCCCTTGTTGTACGCGTCATGAAGATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTTCTCGCCGTCGTCGTGGTGTCGCCTCCCGGATATGAAAATCAGTTCGTCGCGTACTGTACCNCACCACAGCCTCCCAATCTAGGCGCGTCGCTTTAT]

[+] EMBL BX468555             [GCAGAATCGGCACTGTAGGGCGAAGCTGGTGCCCAAAACACACCTCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAGAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGTGTGTGTGTGCGTGAGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTGTATGTGTGTGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGGAGGCGTGCAACGAACATCGCCCCTTGTTGTACGCGTCATGAAGATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTTCTCGCCGTCGTCGTGGTGTCGCCTCCCGGATATGAAAATCAGTTCGTCGCGTACTGTACCNCACCACAGCCTCCCAATCTAGGCGCGTCGCTTTAT]




>consensus_7597#1
GCAGAATCGGCACTGTAGGGCGAAGCTGGTGCCCAAAACACACCTCATGACCGAGAACGA
ATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACTACATGGTGCACCAGCC
CGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACATAAGAAAAAAGAACCTT
CCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTCAGGACGAAATATGTGT
GTGTGTGTGCGTGAGTGTGTGTCGCGGCGTGTCCCTGCTGGATACGAATGTGTATGTGTG
TGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCCTTTGCCAATAGACACCCGGGG
AGGCGTGCAACGAACATCGCCCCTTGTTGTACGCGTCATGAAGATTCTGGAAATGTTCAA
CGCGCCGCGAGCGTCAGTTCTCGCCGTCGTCGTGGTGTCGCCTCCCGGATATGAAAATCA
GTTCGTCGCGTACTGTACCNCACCACAGCCTCCCAATCTAGGCGCGTCGCTTTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7597#0      GGATATTTGCTCCTGCAACATACCATCAAAGAGTCCTCGAACCAAACAAAGAAGCCCAAG 60
consensus_7597#1      ------------------------------------------------------------
                                                                                  

consensus_7597#0      AGGGAGAGAAAGCGAGTGCGATTTGTGCCCAAACCACAATTTGTTACGGAAAAGAAACCG 120
consensus_7597#1      ------------------------------------------------------------
                                                                                  

consensus_7597#0      CTAACCGAGCTCGAGAGACAGTGTGCCCGTGTGCGTTGCTTATTATTTACCAAATAGAAG 180
consensus_7597#1      ------------------------------------------------------------
                                                                                  

consensus_7597#0      AAGCCAAAAAATGAGCGTGAAAGATATTTACTATTCGGATAAATATTACGACGACGAGTA 240
consensus_7597#1      ------------------------------------------------------------
                                                                                  

consensus_7597#0      CGAGTACAGACATGTCGTGCTACCGA-AGGACATAGCGAAGCTGGTGCCCAAAACACACC 299
consensus_7597#1      ----------------GCAGAATCGGCACTGTAGGGCGAAGCTGGTGCCCAAAACACACC 44
                                      *    * **  *    *  *************************

consensus_7597#0      TCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACT 359
consensus_7597#1      TCATGACCGAGAACGAATGGCGAGCGATCGGTGTACAGCAGTCCCGTGGCTGGGTCCACT 104
                      ************************************************************

consensus_7597#0      ACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACAT 419
consensus_7597#1      ACATGGTGCACCAGCCCGAGCCCCACATTCTGCTGTTTCGAAGGCCCATCACGAAGACAT 164
                      ************************************************************

consensus_7597#0      AAGAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTC 479
consensus_7597#1      AAGAAAAAAGAACCTTCCCACCCTGGAGCAAAAACCACCCCGAGATCGATCGAGCTCTTC 224
                      ************************************************************

consensus_7597#0      AGGACGAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGCGGCGTGTCCCTGCTGGA 539
consensus_7597#1      AGGACGAAATATGTGTGTGTGTGTGCGTGAGTGTGTGT--CGCGGCGTGTCCCTGCTGGA 282
                      ************************* *** ********  ********************

consensus_7597#0      TACGAATGTGT--GTGTGTGCGTGCGTGCGTGTGTATGAATGTATGAGTATGTACCCTTT 597
consensus_7597#1      TACGAATGTGTATGTGTGTGCGTGCGTGAGTGTGTATGAATGTATGAGTATGTACCCTTT 342
                      ***********  *************** *******************************

consensus_7597#0      GCCAATAGACACCCGGGGAGGCGTGCAAC-AACATCGCCCCTTGTTGTACGCGTCATGAA 656
consensus_7597#1      GCCAATAGACACCCGGGGAGGCGTGCAACGAACATCGCCCCTTGTTGTACGCGTCATGAA 402
                      ***************************** ******************************

consensus_7597#0      GATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTT----------------------- 693
consensus_7597#1      GATTCTGGAAATGTTCAACGCGCCGCGAGCGTCAGTTCTCGCCGTCGTCGTGGTGTCGCC 462
                      *************************************                       

consensus_7597#0      ------------------------------------------------------------
consensus_7597#1      TCCCGGATATGAAAATCAGTTCGTCGCGTACTGTACCNCACCACAGCCTCCCAATCTAGG 522
                                                                                  

consensus_7597#0      -------------
consensus_7597#1      CGCGTCGCTTTAT 535