cluster # 761

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Anopheles gambiae
cluster # 761 cluster # 761 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_761#0 length = 671 sequences # 1

consensus_761#1 length = 407 sequences # 1

consensusID : consensus_761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGAAGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAGAGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCGGCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGCCCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACACCATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATGCGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGGGGCGATGGGAGCGAAAACAAAGCAACCTTCCCATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCAT]

[+] EMBL BM579852             [CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGAAGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAGAGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCGGCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGCCCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACACCATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATGCGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGGGGCGATGGGAGCGAAAACAAAGCAACCTTCCCATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCAT]




>consensus_761#0
CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGA
AGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAG
AGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAG
AGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCG
GCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGC
CCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACAC
CATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATG
CGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCT
CACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATC
TTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGG
GGCGATGGGAGCGAAAACAAAGCAACCTTCCCATTTGCGCATTTTCGTTGTGTATAGAAG
CATTTGTGCAT

consensusID : consensus_761#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 407
fasta sequence

                              [AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGGAGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTTGTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGAACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA]

[+] EMBL BX469240             [AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGGAGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTTGTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGAACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA]




>consensus_761#1
AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCTCACACGCTCACAA
TGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAG
AAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGGAGGGCGATGGGAG
CGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGC
ATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTTGTAGTACGCAGTG
TTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGAACNAGAGTAAATG
CTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_761#0      CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGA 60
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      AGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAG 120
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      AGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAG 180
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      AGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCG 240
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      GCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGC 300
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      CCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACAC 360
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      CATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATG 420
consensus_761#1      ------------------------------------------------------------
                                                                                 

consensus_761#0      CGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCT 480
consensus_761#1      -------------AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCT 47
                                   *** * *  *    ****   **** * *   ***   *** ****

consensus_761#0      CACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATC 540
consensus_761#1      CACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATC 107
                     ************************************************************

consensus_761#0      TTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGG 600
consensus_761#1      TTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGG 167
                     ************************************************* **********

consensus_761#0      --GGCGATGGGAGCGAA-AACAAAGCAACCTTCCC-ATTTGCGCATTTTCGTTGTGTATA 656
consensus_761#1      AGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATA 227
                       *************** ***************** ************************

consensus_761#0      GAAGCATTTGTGCAT--------------------------------------------- 671
consensus_761#1      GAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTT 287
                     ***************                                             

consensus_761#0      ------------------------------------------------------------
consensus_761#1      GTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGA 347
                                                                                 

consensus_761#0      ------------------------------------------------------------
consensus_761#1      ACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA 407