cluster # 7638

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7638 cluster # 7638 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7638#0 length = 681 sequences # 1

consensus_7638#1 length = 634 sequences # 2
consensus_7638#2 length = 547 sequences # 4

consensusID : consensus_7638#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 681
fasta sequence

                              [CCGCCCACGCGTCCGGAAACTCTCTGTGTCAAATGTCAAAAGGCCAGCAGTATTTCGGTGTTTCAGAAAGTTTTTACACAAAAAAGTAGCGTAAAATTACTCGCTTCCCGTTTGGGTGTAATTTAGTTTCCCCCCATTTTAGGCCCCCCGGTGCGTGCGTGTTTTTAAGCTTGTAGTTTACGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCATCATCACCAGTACCACCACCACAAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGATCACGTTCGCTGCGGGCTGCGGAACGATCTGAAAGTCGCACGTGTGCTGGCACTTGTACGGGCTGCT]

[+] EMBL BM585157             [CCGCCCACGCGTCCGGAAACTCTCTGTGTCAAATGTCAAAAGGCCAGCAGTATTTCGGTGTTTCAGAAAGTTTTTACACAAAAAAGTAGCGTAAAATTACTCGCTTCCCGTTTGGGTGTAATTTAGTTTCCCCCCATTTTAGGCCCCCCGGTGCGTGCGTGTTTTTAAGCTTGTAGTTTACGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCATCATCACCAGTACCACCACCACAAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGATCACGTTCGCTGCGGGCTGCGGAACGATCTGAAAGTCGCACGTGTGCTGGCACTTGTACGGGCTGCT]




>consensus_7638#0
CCGCCCACGCGTCCGGAAACTCTCTGTGTCAAATGTCAAAAGGCCAGCAGTATTTCGGTG
TTTCAGAAAGTTTTTACACAAAAAAGTAGCGTAAAATTACTCGCTTCCCGTTTGGGTGTA
ATTTAGTTTCCCCCCATTTTAGGCCCCCCGGTGCGTGCGTGTTTTTAAGCTTGTAGTTTA
CGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAAGATTTCG
TAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGT
AGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAA
ACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACG
GATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCATCATCACCAGTACCACCACC
ACAAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTC
ACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAG
GACGAAGCGTACGATCACGTTCGCTGCGGGCTGCGGAACGATCTGAAAGTCGCACGTGTG
CTGGCACTTGTACGGGCTGCT

consensusID : consensus_7638#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 634
fasta sequence

                              [CCGGAAAACGTGCACGGCCGACAAGTTTAGCCACTGCTTCTACGTGTTCTTCGCCGTACGCCTGCCTCCTGGTTCCCGTGGTTTGCCGAGTGTTGGATTCATCTAGCCGACCGGAGTTGTTTGCTGACGGTACGAAAGCGACACAAACACCGCAAAATGCCTTCCAGTGACCCGTTGCCACCGAAGGAAAGTGCCCTGTTCCGCAAGATACTGAAATGCTACGAAATGAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGATCACGTTCGCCGCGGGCTGCGGAACGATCTGAAGTCGCACGTGTGCTGGCACGTGTACGGGCTGCTGCAGCGGTCGGACAAGAAGTACGACGAAGCGATCAAGTGCTACCGGAACGCGCTCAAGTGGGAGAAGGACAACATTCAGATCCTGCGCGATCTGTCGCTGCTGCAGATACAGATGCGCGACCTGGAGGGGTACCGGGAAACGCGGCACCAGCTGTTCAAGCTGCGGCCGTCCCAGCACGCCAGCTGGATTGGCTTTGCGATGAGTTACC]

[+] EMBL BM653206             [CCGGAAAACGTGCACGGCCGACAAGTTTAGCCACTGCTTCTACGTGTTCTTCGCCGTACGCCTGCCTCCTGGTTCCCGTGGTTTGCCGAGTGTTGGATTCATCTAGCCGACCGGAGTTGTTTGCTGACGGTACGAAAGCGACACAAACACCGCAAAATGCCTTCCAGTGACCCGTTGCCACCGAAGGAAAGTGCCCTGTTCCGCAAGATACTGAAATGCTACGAAATGAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGATCACGTTCGCCGCGGGCTGCGGAACGATCTGAAGTCGCACGTGTGCTGGCACGTGTACGGGCTGCTGCAGCGGTCGGACAAGAAGTACGACGAAGCGATCAAGTGCTACCGGAACGCGCTCAAGTGGGAGAAGGACAACATTCAGATCCTGCGCGATCTGTCGCTGCTGCAGATACAGATGCGCGACCTGGAGGGGTACCGGGAAACGCGGCACCAGCTGTTCAAGCTGCGGCCGTCCCAGCACGCCAGCTGGATTGGCTTTGCGATGAGTTACC]
[+] EMBL BX624897             [                   GACGAGTTTAGCCACTGCTTCTACGTGTTCTTCGCCGTACGCCTGCCTCCTGGTTCCCGTGGTTTGCCGAGTGTTGGATTCATCTAGCCGACCGGAGTTGTTTGCTGACGGTACGAAAGCGACACAAACACCGCAAAATGCCTTCCAGTGACCCGTTGCCACCGAAGGAAAGTGCCCTGTTCCGCAAGATACTGAAATGCTACGAAATGAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGATCACGTTCGCCGCGGGCTGCGGAACGATCTGAAGTCGCACGTGTGCTGGCACGTGTACGGGCTGCTGCAGCGGTCGGACAAGAAGTACGACGAAGCGATCAAGTGCTACCGGAACGCGCTCAAGTGGGAGAAGGACAACATTCAGATCCTGCGCGATCTGTCGCTGCTGCAGATACAGATGCGCGACC                                                                                       ]




>consensus_7638#1
CCGGAAAACGTGCACGGCCGACAAGTTTAGCCACTGCTTCTACGTGTTCTTCGCCGTACG
CCTGCCTCCTGGTTCCCGTGGTTTGCCGAGTGTTGGATTCATCTAGCCGACCGGAGTTGT
TTGCTGACGGTACGAAAGCGACACAAACACCGCAAAATGCCTTCCAGTGACCCGTTGCCA
CCGAAGGAAAGTGCCCTGTTCCGCAAGATACTGAAATGCTACGAAATGAAACAATACAAA
AATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAA
ACGCTCGCCATGAAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGCGTACGAT
CACGTTCGCCGCGGGCTGCGGAACGATCTGAAGTCGCACGTGTGCTGGCACGTGTACGGG
CTGCTGCAGCGGTCGGACAAGAAGTACGACGAAGCGATCAAGTGCTACCGGAACGCGCTC
AAGTGGGAGAAGGACAACATTCAGATCCTGCGCGATCTGTCGCTGCTGCAGATACAGATG
CGCGACCTGGAGGGGTACCGGGAAACGCGGCACCAGCTGTTCAAGCTGCGGCCGTCCCAG
CACGCCAGCTGGATTGGCTTTGCGATGAGTTACC

consensusID : consensus_7638#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 547
fasta sequence

                              [TAGTTTACGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAAC-AAACACCATCATCACCAGTACCACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGAAGGGTTCATCTGCGGCGTGGTGGAAGGGTTCTACGGCCGCCCGTGGACAACGGAGCAGCGGAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTACATCTACGCACCGAAGGACGACTACAAGCACCGGGCGTACTGGCGCGAGCTGTACACGGTGGAGGAGGCGGACCACCTGACC]

[+] EMBL AGA285164            [TAGTTTACGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAAC AAACACCATCATCACCAGTATCACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGAAGGGTTCATCTGCGGCGTGG                                                                                                                                                                       ]
[+] EMBL AGA282959            [                                         CCATCTGCGAGAGCSGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAAC AAACACCATCATCACCAGTACCACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGAAGGGTTCATCTGCGGCGTGGTGGAAGGGTTCTACGGCCGCCCGTGGACAACGGAGCAGCGGAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTACATCTACGCACCGAAGGACGACTACAAGCACCGGGCGTACTGGCGCGAGCTGTACACGGTGGAGGAGGCGGACCAC      ]
[-] EMBL AGA281351            [                                          CATCTGCGAGAGCCGCAAGATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATAACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATATGGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAAC AAACACCATCATCACCAGTACCACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGAAGGGTTCATCTGCGGCGTGGTGGAAGGGTTCTACGGCCGCCCGTGGACAACGGAGCAGCGGAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTACATCTACGCACCGAAGGACGACTACAAGCACCGGGCGTACTGGCGCGAGCTGTACACGGTGGAGGAGGCGGACCACCTGAC ]
[-] EMBL AGA283871            [                                                                                                                                                                                                                                                   CACGGATGCTGGGATGCTTGGAGCGCCCGGCACAACAAAACACCATCATCACCAGTACCACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGAAGGGTTCATCTGCGGCGTGGTGGAAGGGTTCTACGGCCGCCCGTGGACAACGGAGCAGCGGAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTACATCTACGCACCGAAGGACGACTACAAGCACCGGGCGTACTGGCGCGAGCTGTACACGGTGGAGGAGGCGGACCACCTGACC]




>consensus_7638#2
TAGTTTACGCATTCCTTTCGGAACCTTCTTCCTTCGGATGACCATCTGCGAGAGCCGCAA
GATTTCGTAGTGGGAAGAATATTGCACCAACACGCAAAGCAACTGTGCCACCGGGACATA
ACTGTGTAGGAACCGCCGCGCACGAACAGCAGTGGCCCAACACTCGCTAGACTGCGATAT
GGCTGAAACGGTGACGGATGCACCCTCGGAACCAGCCCATCCGGGGATGAGCCTGCAGGA
AGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCATCATCACCAGTAC
CACCACCACCACCGACGCGGAGTTGCTGCCCGACGGCGGTAACTGCCATACGCCGGCGGA
AGGGTTCATCTGCGGCGTGGTGGAAGGGTTCTACGGCCGCCCGTGGACAACGGAGCAGCG
GAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTACATCTACGCACCGAA
GGACGACTACAAGCACCGGGCGTACTGGCGCGAGCTGTACACGGTGGAGGAGGCGGACCA
CCTGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7638#0      CCGCCCACGCGTCCGGAAACTCTCTGTGTCAAATGTCAAAAGGCCAGCAGTATTTCGGTG 60
consensus_7638#2      ------------------------------------------------------------
consensus_7638#1      ------------------------------------------------------------
                                                                                  

consensus_7638#0      TTTCAGAAAGTTTTTACACAAAAAAGTAGCGTAAAATTACTCGCTTCCCGTTTGGGTGTA 120
consensus_7638#2      ------------------------------------------------------------
consensus_7638#1      ----------------------------------------------------CCGGAAAA 8
                                                                                  

consensus_7638#0      ATTTAGTTTCCCCCCATTTTAGGCCCCCCGGTGCGTGCGTGTTTTTAAGCTTGTAGTTTA 180
consensus_7638#2      -----------------------------------------------------TAGTTTA 7
consensus_7638#1      CGTGCACGGCCGACAAGTTTAG---CCACTGCTTCTACGTGTTCTTCGCCGTACGCCTGC 65
                                                                               *  

consensus_7638#0      CGCATTCCTTTCGGAACCTTCTTCCT-TCGGATGACCATCTGCGAGAGCCGCAAGATTTC 239
consensus_7638#2      CGCATTCCTTTCGGAACCTTCTTCCT-TCGGATGACCATCTGCGAGAGCCGCAAGATTTC 66
consensus_7638#1      CTCCTGGTTCCCGTGGTTTGCCGAGTGTTGGAT--TCATCTAGCCGACCGGAGTTGTTTG 123
                      * * *   *  **     * *    * * ****   *****    ** * *     *** 

consensus_7638#0      GTAGTGGGAAGAATATTGCACCAACAC-GCAAAGCAACTGTGCCACCGGGACATAACTGT 298
consensus_7638#2      GTAGTGGGAAGAATATTGCACCAACAC-GCAAAGCAACTGTGCCACCGGGACATAACTGT 125
consensus_7638#1      CTGACGGTACGAAAGCGACACAAACACCGCAAAATGCCTT--CCAGTGACCCGTTGCCAC 181
                       *   ** * ***     *** ***** *****    **   ***  *   * *  *   

consensus_7638#0      -GTAGGAA------CCGCCGCGCACGA-ACAGCAGTGGCCCAACACTCGCTAGACTGCGA 350
consensus_7638#2      -GTAGGAA------CCGCCGCGCACGA-ACAGCAGTGGCCCAACACTCGCTAGACTGCGA 177
consensus_7638#1      CGAAGGAAAGTGCCCTGTTCCGCAAGATACTGAAATGCTACGAAATGAAACAATACAAAA 241
                       * *****      * *   **** ** ** * * **   * * *      *       *

consensus_7638#0      TATGGCTGAAAC-GGTGACGGATGCACCCTCGGAACC--AGCCCATC-----CGGGGATG 402
consensus_7638#2      TATGGCTGAAAC-GGTGACGGATGCACCCTCGGAACC--AGCCCATC-----CGGGGATG 229
consensus_7638#1      ATGGACTGAAACTGGCGAAGCAGATACTCTCCAACCCGAAGTTCACCGAGCATGGCGAAA 301
                         * ******* ** ** * *   ** ***  * **  **  ** *      ** **  

consensus_7638#0      AGCCTGC-AGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCAT 461
consensus_7638#2      AGCCTGC-AGGAAGGCACGGATGCTGGGATGCTTGGAGCGGCCGGCACAACAAACACCAT 288
consensus_7638#1      CGCTCGCCATGAAGGGTTTGACGCTCAACTGTCT----CGGCCGGAAGGACGAAGCGTAC 357
                       **  ** * *****    ** ***    **  *    ******* *  ** **    * 

consensus_7638#0      CATCACCAGTACCACCA-CCACAAAACAATACAAAAATGGACTGAAACTGGCGAAGCAGA 520
consensus_7638#2      CATCACCAGTACCACCA-CCACCAC-CGACGCGGAGTTGCTGCCCGACGGCGGTAACTGC 346
consensus_7638#1      GATCACGTTCGCCGCGGGCTGCGGAACGATCTGAAGTCGCACGTGTGCTGGC---ACGTG 414
                       *****     ** *   *  *    * *     *   *        * *      *   

consensus_7638#0      TACTCTCCAACCCGAAG-TTCACCGA---GCATGGCGAAA--------CGCTCGCC-ATG 567
consensus_7638#2      CATACGCCGGCGGAAGGGTTCATCTGCG-GCGTGGTGGAAGGGTTCTACGGCCGCCCGTG 405
consensus_7638#1      TACGGGCTGCTGCAGCGGTCGGACAAGAAGTACGACGAAG--------CGATCAAGTGCT 466
                       *    *         * *    *     *   *  * *         **  *       

consensus_7638#0      AAGGGTTTGACGCTCAACTGTCTCGGCCGGAAGGACGAAGC------GTACGATCACGTT 621
consensus_7638#2      GACAACGGAGCAGCGGAAGGATCTGTTCCGCAAGCTGAAGCAGTGGGGCATGGACGCGTA 465
consensus_7638#1      ACCGGAACG-CGCTCAAGTGGGAGAAGGACAACATTCAGATCCT---GCGCGATCTGTCG 522
                                *     *  *           *     *         *   *  *     

consensus_7638#0      CG-CTGCGGG--CTGCGGAACGATCTGAAAG--TCGCACGTGTGCTGGCAC---TTGTAC 673
consensus_7638#2      CATCTACGCA--CCGAAGGACGA-CTACAAG--CACCGGGCGTACTGGCGCGAGCTGTAC 520
consensus_7638#1      CTGCTGCAGATACAGATGCGCGACCTGGAGGGGTACCGGGAAACGCGGCACCAGCTGTTC 582
                      *  ** *     * *  *  *** **  * *     *  *      *** *    *** *

consensus_7638#0      GGGCTGCT-------------------------------------------- 681
consensus_7638#2      ACGGTGGAGGAGGCGGACCACCTGACC------------------------- 547
consensus_7638#1      AAGCTGCGGCCGTCCCAGCACGCCAGCTGGATTGGCTTTGCGATGAGTTACC 634
                        * **