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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 818 fasta sequence
[GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC-AAA---------CGC-----G-----ACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA-TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT-GACGTACGTGTACCAGCTGGTGGGCGAC-GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAAGAGGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAGAGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA]
[+] EMBL BX628568 [GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA CGC G ACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGG ATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAAGAGG ]
[+] EMBL BX626544 [ ACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCTAAAGCTACTTGTCCC C ACTATTATCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGGCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCATTTCCGTCCTTTGTGCTGATGGACATNCAGAGCACGACGGTCGTGGACGTACGTG ]
[+] EMBL BM635362 [ ccgCTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA AGCCACTTGTCCCCACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGACGGACGTTAAGGTG ]
[+] EMBL BX626339 [ TTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA AGCCACTTGTCCCCACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGgcg ]
[+] EMBL BM636236 [ ccgCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCTAAAGCTACTTGTCTC C ACTATTCTCCTTCGTCCGTTTGGTGTTTGAGTGATATAGACGATCGTTCGCAGGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCGGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAAT ]
[+] EMBL BM644949 [ ccgGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGT GCGGAGACTTTGACGAAAACACCAACTACCCGCAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCAC ]
[+] EMBL BM597865 [ ccgGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAAGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAGAGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA]
consensusID : consensus_7653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence
[CCGGTCTAAAGCTACTTGTCTCCACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGTGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAA]
[+] EMBL BM595638 [CCGGTCTAAAGCTACTTGTCTCCACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGTGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7653#0 GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTG 60
consensus_7653#1 ------------------------------------------------------------
consensus_7653#0 TTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCAAACGCGACTATT 120
consensus_7653#1 ----------------------------CCGGTCTAAAGCTA---CTTGTCTCCACTATT 29
**** * * ** * * ******
consensus_7653#0 CTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGA 180
consensus_7653#1 CTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGA 89
*********************** ************************************
consensus_7653#0 TGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCA 240
consensus_7653#1 TGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCA 149
************************************************************
consensus_7653#0 AGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGT 300
consensus_7653#1 AGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGT 209
**************************** ***** *************************
consensus_7653#0 GCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCG 360
consensus_7653#1 GCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCG 269
************************************************************
consensus_7653#0 GAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCC 420
consensus_7653#1 GAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCC 329
************************************************************
consensus_7653#0 GGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCC 480
consensus_7653#1 GGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCC 389
************************************************************
consensus_7653#0 TCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAG 540
consensus_7653#1 TCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAG 449
************************************************************
consensus_7653#0 CGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATC 600
consensus_7653#1 CGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACC 509
********************************************************** *
consensus_7653#0 CGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCG 660
consensus_7653#1 CGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCG 569
************************************************************
consensus_7653#0 TGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGA 720
consensus_7653#1 TGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGA 629
************************************************************
consensus_7653#0 AGAATTGAAGAGGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAG 780
consensus_7653#1 AGAATTGAGCAA------------------------------------------------ 641
******** *
consensus_7653#0 AGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA 818
consensus_7653#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||