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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1070 fasta sequence
[TTTTTTTTTAAAAAGTCCTATAACAAACCTAGGAACGAATTTTATTTCAAAACAAAGCAGTTCGTAATGGCGGGTTTTGAGAGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTGCGAGATGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGGACAGGCGTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTTA-CATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTAC-G-CCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAGATCGTCCGAGCGCAAAAACTGCCGGTCACACTGCGGGCACGCTATCTTACTGCTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGCTGCACTTGTCACAGTACCACCGTTTGCCTTTCTGTATCATCAGTGGCTGGCTGACGGGTTGCTCCATTTCCTCCGCATTGCTGTCCTCCGCGTCGTCACAGGCCGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTG-CCCTCGGCTGTGGGCCTTTTTGCGGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCCGCTGGCACTGCTCGATGAACTGGTACGCTTCCTGTGCCCGAGTCACACACTTGGTGCAGATGTGCTTGGGCAGCAGCGA-TTCGTTGCACGATTCGAGCTCATC---------AATGGATAAAATATCTCGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTACAGTTCCGTCTGACCGTCGGTTTCGTCCAGCAGACAAACACGGCAAACGTCCGGTAGTTTTGCGGCCACACTTTCCATACACAACGCACGT-TTTCACTTTTTTCCATCCTTTTGATTCTCACCCGAATGCAATCCGGCAACTACTTTCCTCTCCAGT]
[+] EMBL CNS09PBE [TTTTTTTTTAAAAAGTCCTATAACAAACCTAGGAACGAATTTTATTTCAAAACAAAGCAGTTCGTAATGGCGGGTTTTGAGAGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTGCGAGATGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGGACAGGCGTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTTA CATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTAC G CCGCTCCCCGGTGTGCGTCCGTATGTTGCGCGTCAGAACTTCCGAGCGCAAAAACTGCCGGTCACACT ]
[+] EMBL CNS09EUJ [ GGAACGAATTTTATTTCAAAACAAAGCAGTTCGTAATGGCGGGTTTTGAGAGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTGCGAGAAGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGGACAGGCGTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTAA CATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTAC G CCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAAAACGTCCGAGCGCAAAAACTGCCGGTAACACTGCGGGCACGCTATCTTACTGCTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCA CGTTTGCGG ]
[+] EMBL CNS0994Z [ ACGAATTTTATTTCAAAACAAAGCAGTTCGTAATGGCGGGTTTTGAGAGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTGCGAGAAGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGGACAGGCGTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTTA CATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTAC G CCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAGATCGTCCGAGCGCAAAAACTGCCGGTCACACTGCGGGCACGCTATCTTTTTTTTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCAGGTTTTGCGGCTGGCTGAAGCCCTTGCTGCACTTGTCACAGTACCACCGTTTGCCTTTCTGTATCATCAGTGGCTGGCTGACGGGTTGCTCCATTTCCTCCGCATTGCTGTCCTCCGCGTCGTCACAGGCCGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTG CCCTCGGCTGTGGGCCTTTTTGCGGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCCGCTGGCACTGCTCGATGAACTGGTACGCTTCCTGTGCCCGAGTAACACACTTGGTGCAGATGTGCTTGGGCAGCAGCGA TTCGTTGCACGATTCGAGCTCATC AATGGATAAAATATCTCGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTACAGTTCCGTCTGACCGTCGGTTTCGTCCAGCAGAAAAACACGGCAAACGTCCGGTAGTTT ]
[-] EMBL CNS0994Y [ AGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTGCGAGATGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGCACAGGCGTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTTAGCATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTACGG CCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAGATCGTCCGAGCGCAAAAACTGCCGGTCACACTGCGGGCACGCTATCTTACTGCTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGCTGCACTTGTCACAGTACCACCGTTTGCCTTTCTGTATCATCAGTGGCTGGCTGACGGGTTGCTCCATTTCCTCCGCATTGCTGTCCTCCGCGTCGTCACAGGCCGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTGCCCCTCGGCTGTGGGCCTT ]
[-] EMBL CNS09PBD [ GTGCGGCTTTTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTTGCACTCGTCGCACCGGTACTGCTTCTCCTGGCTGTGCGTTAGCATGTGCTCCTTCAGCTCCGAACCCTGCTTGTACTTCTTCGGGCACAGCTTGCACCGGTACGG CCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAGATCGTCCGAGCGCAAAAACTGCCGGTCACACTGCGGGCACGCTATCTTACTGCTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGCTGCACTTGTCACAGTACCACCGTTTGCCTTTCTGTATCATCAGTGGCTGGCTGACGGGTTGCTCCATTTCCTCCGCATTGCTGTCCTCCGCGTCGTCACAGGCCGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTG CCCTCGGCTGTGGGCCTTTTTGCGGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCCGCTGGCACTGCTCGATGAACTGGTACGCTTCCTGTGCCCGAGTCACACACTTGGTGCAGATGTGCTTGGGCAGCAGCGA TTCGTTGCACGATTCGAGCTCATCATTAATAAAAATGGATAAAATATCTCGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTACAGTTCCGTCTGACCGTCGGTTTCGTCCAGCAGACAAACACGGCAAACGTCCGGTAGTTTTGCGGCCACACTTTCCATACACAACGCACGT TTTCACTTTTTTCCATCCTTTTGATTCTCACCCGAATGCAATCCGGCAACTACTTTCCTCTCCAGT]
[-] EMBL BX622458 [ CGTTAGCATGTGCTCCTTCAGCTCCGAGCCCTGCTTGTACTTNTTCGGGCACAGCTNGCACCGGTAC GNCCGCTCCCCGGTGTGCGTCCGTATGTGGCGCGTCAGATCGTCCGAGCGCAAAAACTGCCGGTCACACTGCGGGCACGCTATCTTACTGCTGCCCGTTTCGTCGTGTATCCGGTAGTGCCGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGCTGCATTTGTCACAGTACCAGCGTTTCCCTTTCTGTATCATCAGTGGCTGGCTGACGGGGTGCTCCATTTCCTCCGCATTGCTGTCCTCCGCGTCGTCACAGGCGGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTG CCCTCGGATGTGGGACTTTTCGCGGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCCGCTGGCACTGCTCGATGAACTGGTACGCTTCCTGTGCCCGAGTCACACACCTGGTGCAGATGTGCTTGGGCAGCAGCGA TTCGTTGCACGATTCGAGCTCATCATTAATAAAAATGGATAAAATATCTCGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTACAGTTCCGTCTGGCCGTCGGTTTCGTCCAGCAGACAAACACGGCAAACGTCCGGCAGTTTTGTGGCCACACTTTCCATACACAACGCACGTGTTTCACTTTTTTCCATt ]
[-] EMBL CNS09EUI [ CGCATTGCTTTCCTCCGCGTCGTCACAGGCCGGGCGGGCATTCGCTATTTCCAGCTTAATCACTGTG CCCTCGGCTGTGGGCCTTTTTGCGGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCCGCTGGCACTGCTCGATGAACTGGTACGCTTCCTGTGCCCGAGTCACACACTTGGTGCAGATGTGCTTGGGCAGCAGCGATTTCGTTGCACGATTCGAGCTCATC AATGGATAAAATATCTCGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTACAGTTCCGTCTGACCGTCGGTTTCGTCCAGCAGACAAACACGGCAAACGTCCGGTAGTTTTGCGGCCACACTTTCCATACACAACGCACGT TTTCACTTTTTTCCATCCTTTTGATTCTCACCCGAATGCAATCCGGCAACTA ]
consensusID : consensus_7656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 642 fasta sequence
[CTCCTTCAGCTCCGTAACCCCTGCTTGTACTTCTTCGGGCTACAGCTNTGCACCGGTACNGGCCGNTGCCNCCGGTGTGCAGTGCCTGTATGTTGGCTGCGCTCAGATCTGTCGCGTAGCGCNGAAGAACTTGCCGGTCACACGTGNCGGGACACGGCTATCGTTGACTGCTGCCCGTTTCGTCGTGTATCCAGGTAGTGTCCTGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGGCGGCACTGTGTGCACGAGTACCACCGTTTCGCCTTTGCTGGTATGCATCNAGTGGCTGGCTGACGGTTTGCTCCATTTCGCTCCGCATTGCTGGTCCTCCGCGTGCGTCTACAGGCCGGGCGGCATTCGCTATTTCCAGCTTAATCACTGTGCCACTCGCTGTGGGCCATTTTTGCGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCNCCGCTGGCACTGCTCGTATGAACTGGTACGCTTCCTGTGCCCGAGTCACTACACTTGGTGCAGATGTGCTTGGCCAGCAGCGATTCGTTGCACGATTCGAGANTCATCATTAATAAGAGATGGATAAAATATCTCGATAACCNCGGGATTCTTG]
[-] EMBL AL929663 [CTCCTTCAGCTCCGTAACCCCTGCTTGTACTTCTTCGGGCTACAGCTNTGCACCGGTACNGGCCGNTGCCNCCGGTGTGCAGTGCCTGTATGTTGGCTGCGCTCAGATCTGTCGCGTAGCGCNGAAGAACTTGCCGGTCACACGTGNCGGGACACGGCTATCGTTGACTGCTGCCCGTTTCGTCGTGTATCCAGGTAGTGTCCTGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGGCGGCACTGTGTGCACGAGTACCACCGTTTCGCCTTTGCTGGTATGCATCNAGTGGCTGGCTGACGGTTTGCTCCATTTCGCTCCGCATTGCTGGTCCTCCGCGTGCGTCTACAGGCCGGGCGGCATTCGCTATTTCCAGCTTAATCACTGTGCCACTCGCTGTGGGCCATTTTTGCGGGGATGCTACGGTGGCATTGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCNCCGCTGGCACTGCTCGTATGAACTGGTACGCTTCCTGTGCCCGAGTCACTACACTTGGTGCAGATGTGCTTGGCCAGCAGCGATTCGTTGCACGATTCGAGANTCATCATTAATAAGAGATGGATAAAATATCTCGATAACCNCGGGATTCTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7656#0 TTTTTTTTTAAAAAGTCCTATAACAAACCTAGGAACGAATTTTATTTCAAAACAAAGCAG 60
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 TTCGTAATGGCGGGTTTTGAGAGCGTTTCATTTCCGTGGCGTGTGTATGTGCCGAACGTG 120
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 CGAGATGCGCTCGCTCGACGTGGTAAACCGTTTGTCGCAATGCGGACAGGCGTGCGGCTT 180
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 TTCCCCCCGGTGCAGCTTCATGTGCACGTACAGGCCATTGCGCGAGGCCAGCTGTTTGTT 240
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 GCACTCGTCGCACCGGAACTGCTTCTCCTGGCTGTGCGTTACATGTGCTCCTTCAGCTCC 300
consensus_7656#1 -----------------------------------------------CTCCTTCAGCTCC 13
*************
consensus_7656#0 GAA--CCCTGCTTGTACTTCTTCGGGC-ACAGCTT-GCACCGGTACG--CCGCT--CCCC 352
consensus_7656#1 GTAACCCCTGCTTGTACTTCTTCGGGCTACAGCTNTGCACCGGTACNGGCCGNTGCCNCC 73
* * ********************** ****** ********** *** * * **
consensus_7656#0 GGTGTGC---GTCCGTATGTGG--CGCG-TCAGATCGTCCG---AGCGCAAAAA---CTG 400
consensus_7656#1 GGTGTGCAGTGCCTGTATGTTGGCTGCGCTCAGATCTGTCGCGTAGCGCNGAAGAACTTG 133
******* * * ****** * *** ******* ** ***** ** **
consensus_7656#0 CCGGTCACAC-TGCGGGCAC---GCTATCTT--ACTGCTGCCCGTTTCGTCGTGTATCC- 453
consensus_7656#1 CCGGTCACACGTGNCGGGACACGGCTATCGTTGACTGCTGCCCGTTTCGTCGTGTATCCA 193
********** ** ** ** ****** * **************************
consensus_7656#0 GGTAGTGCC--GGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTG-CTGCACT-TGT-CAC- 507
consensus_7656#1 GGTAGTGTCCTGGCGCAGCGTTTGCGGCTGGCTGAAGCTCTTGGCGGCACTGTGTGCACG 253
******* * ******************************** * ***** *** ***
consensus_7656#0 AGTACCACCGTTT-GCCTTTCT--GTAT-CATCA-GTGGCTGGCTGACGGGTTGCTCCAT 562
consensus_7656#1 AGTACCACCGTTTCGCCTTTGCTGGTATGCATCNAGTGGCTGGCTGACGGTTTGCTCCAT 313
************* ****** **** **** *************** *********
consensus_7656#0 TTC-CTCCGCATTGCTG-TCCTCCGCGT-CGTC-ACAGGCCGGGCGGGCATTCGCTATTT 618
consensus_7656#1 TTCGCTCCGCATTGCTGGTCCTCCGCGTGCGTCTACAGGCCGGGCGG-CATTCGCTATTT 372
*** ************* ********** **** ************* ************
consensus_7656#0 CCAGCTTAATCACTGTGCCCTCGGCTGTGGGCCTTTTTGCGGGGGATGCTACGGTGGCAT 678
consensus_7656#1 CCAGCTTAATCACTGTGCCACTCGCTGTGGGCCATTTTTGCGGGGATGCTACGGTGGCAT 432
******************* ********** **** *******************
consensus_7656#0 TGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCCC-GC 737
consensus_7656#1 TGGTTTTCGTTTTACTGTGAAGGCTTTCAAAGCACTGCTCCAGAAGTTTGTCCGCNCCGC 492
******************************************************* * **
consensus_7656#0 TGGCACTGCTCG-ATGAACTGGTACGCTTCCTGTGCCCGAGTCAC-ACACTTGGTGCAGA 795
consensus_7656#1 TGGCACTGCTCGTATGAACTGGTACGCTTCCTGTGCCCGAGTCACTACACTTGGTGCAGA 552
************ ******************************** **************
consensus_7656#0 TGTGCTTGGGCAGCAGCGATTCGTTGCACGATTCGAG-CTCATCAATGGATAAAATATCT 854
consensus_7656#1 TGTGCTTGGCCAGCAGCGATTCGTTGCACGATTCGAGANTCATCATTA-ATAAGAGATGG 611
********* *************************** ****** * **** * **
consensus_7656#0 CGGAAACAGTTCATATGCTCCACACTGTTTGGCTGCACGTACACATCGTCGATGGTGTAC 914
consensus_7656#1 ATAAAATATCTCGATAACCNCGGGATTCTTG----------------------------- 642
*** * ** * * * ***
consensus_7656#0 AGTTCCGTCTGACCGTCGGTTTCGTCCAGCAGACAAACACGGCAAACGTCCGGTAGTTTT 974
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 GCGGCCACACTTTCCATACACAACGCACGTTTTCACTTTTTTCCATCCTTTTGATTCTCA 1034
consensus_7656#1 ------------------------------------------------------------
consensus_7656#0 CCCGAATGCAATCCGGCAACTACTTTCCTCTCCAGT 1070
consensus_7656#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||