cluster # 766

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Anopheles gambiae
cluster # 766 cluster # 766 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_766#0 length = 661 sequences # 1

consensus_766#1 length = 598 sequences # 1

consensusID : consensus_766#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 661
fasta sequence

                              [CGAGGTAAAGCTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGACGTGCAGCCGCGGGCGTTCATCGAGGAGCTGCTGCGCAGCTCCGCTAATGGGCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTACTTAATCGGGTGGAAAACTGTTCCGGCTTGCGGGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGCACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAATCGGCCGACATTGCGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACCATATTTCCACCTGCTTGCGCAAGCAGCTGGAA]

[+] EMBL BM631479             [CGAGGTAAAGCTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGACGTGCAGCCGCGGGCGTTCATCGAGGAGCTGCTGCGCAGCTCCGCTAATGGGCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTACTTAATCGGGTGGAAAACTGTTCCGGCTTGCGGGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGCACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAATCGGCCGACATTGCGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACCATATTTCCACCTGCTTGCGCAAGCAGCTGGAA]




>consensus_766#0
CGAGGTAAAGCTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGACGT
GCAGCCGCGGGCGTTCATCGAGGAGCTGCTGCGCAGCTCCGCTAATGGGCTTCCGGTGCT
GTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTACTTAATCGGGTGGAAAACTGT
TCCGGCTTGCGGGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCG
TACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTGGTGCTGAAG
CAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGAT
AAGCAGAGTCTCAACGCAAGCCTGGTCGGCACGGTGGAGTACATTGCGCCGGATCTCATC
TACTGTGATCGATACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCAGG
ATTGGTGACGGGCGTGCGGCCCTTTATACCGCACGCACCGATCACGCGCTGGATGATGCA
CGTGCAGCAGAAGAAATCGGCCGACATTGCGATCACGGAGGACAATCGGGAAAACTACAC
CTACCACACGGAGATATTTGCGGAAAACCATATTTCCACCTGCTTGCGCAAGCAGCTGGA
A

consensusID : consensus_766#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence

                              [CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGTAGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGCAAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATATAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGCACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCGAGATTGTGACGGGCGTGCGGCCCTTCATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT]

[+] EMBL BM618262             [CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGTAGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGCAAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATATAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGCACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCGAGATTGTGACGGGCGTGCGGCCCTTCATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT]




>consensus_766#1
CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGT
AGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGC
AAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATA
TAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGAC
GTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGG
GATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTA
ACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGC
ACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGAC
TACTGGTCGATGGGCGTGATCGGGTTCGAGATTGTGACGGGCGTGCGGCCCTTCATACCG
CACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_766#0      -CGAGGTAAAG--CTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGA 57
consensus_766#1      CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGT 60
                      ** ** ***   *   *  *   *    *  *   * ** * *   *  **  *  ** 

consensus_766#0      CGTGCAG-------CCGCGGGCGTTCATCGAGGAGCTGC-TGC-GCAGCTCCGCTAATGG 108
consensus_766#1      AGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGC 120
                      ***          ****   *  **   *   *   *  *** *****  *** ** * 

consensus_766#0      GCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTA--CTTAATC 166
consensus_766#1      AAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATA 180
                          **       *   **   ** ***    ** *** * *** *  **   * *** 

consensus_766#0      GGGTGGAAA-------ACTGTTCCGGCTTGC---------GGGAGCAGGACGTGCGGGAC 210
consensus_766#1      TAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGAC 240
                       *   *         * *  ******             * ******************

consensus_766#0      GTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGG 270
consensus_766#1      GTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGG 300
                     ************************************************************

consensus_766#0      GATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTA 330
consensus_766#1      GATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTA 360
                     ******************** ***************************************

consensus_766#0      ACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGC 390
consensus_766#1      ACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGC 420
                     ***************************** ******************** *********

consensus_766#0      ACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGAC 450
consensus_766#1      ACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGAC 480
                     *********************** ***************** ******************

consensus_766#0      TACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACC 510
consensus_766#1      TACTGGTCGATGGGCGTGATCGGGTTCGAGATTG-TGACGGGCGTGCGGCCCTTCATACC 539
                     ***************************  ***** ******************* *****

consensus_766#0      GCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAA-TCGGCCGACATTG 569
consensus_766#1      GCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT- 598
                     ****************************************** *** ************ 

consensus_766#0      CGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACC 629
consensus_766#1      ------------------------------------------------------------
                                                                                 

consensus_766#0      ATATTTCCACCTGCTTGCGCAAGCAGCTGGAA 661
consensus_766#1      --------------------------------