cluster # 767

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Anopheles gambiae
cluster # 767 cluster # 767 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_767#0 length = 598 sequences # 1

consensus_767#1 length = 581 sequences # 1

consensusID : consensus_767#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence

                              [CCGGCTATATGATACAGCAGCAGAAGCTCGACTCGTACATCCTCAGTCAGCGGGTGCGCAATCTGCAGCGGGCTCGCTTCCAGGAGCGAAAGGTGCTCTTCTACTTCGACTATCTGGATAACGATTATGTTTGTGTGAACTTTACACTGGAACGATGGATGCCGGTAGCCAACATGTCACGCTACCTACCGATCCGTGTGTACGATTACTACGCGCCAGAACGCTTCAATGAGACCATCTTCGATTCGCTGCAAACCTACCTGCTGAACATCTGCGAAGTGTGCGGCAGCTCGCAGTGCCCGTACTGCTCGATCTACAACATTGCCGTCCGCTTCCCGGGCTCGATCGTGCTGATGCTGCTGACCGGCATCGTGCTCGTGGCCCGCCACTACCGAATAGTCAATCCAAATGGGTGGATTTTCCTCAACGATTAATATCGCGATCGAAGAAGCGCAAACTGTGTAAATATACAAACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGAATCTCCTTATATCAATAC]

[+] EMBL BX623854             [CCGGCTATATGATACAGCAGCAGAAGCTCGACTCGTACATCCTCAGTCAGCGGGTGCGCAATCTGCAGCGGGCTCGCTTCCAGGAGCGAAAGGTGCTCTTCTACTTCGACTATCTGGATAACGATTATGTTTGTGTGAACTTTACACTGGAACGATGGATGCCGGTAGCCAACATGTCACGCTACCTACCGATCCGTGTGTACGATTACTACGCGCCAGAACGCTTCAATGAGACCATCTTCGATTCGCTGCAAACCTACCTGCTGAACATCTGCGAAGTGTGCGGCAGCTCGCAGTGCCCGTACTGCTCGATCTACAACATTGCCGTCCGCTTCCCGGGCTCGATCGTGCTGATGCTGCTGACCGGCATCGTGCTCGTGGCCCGCCACTACCGAATAGTCAATCCAAATGGGTGGATTTTCCTCAACGATTAATATCGCGATCGAAGAAGCGCAAACTGTGTAAATATACAAACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGAATCTCCTTATATCAATAC]




>consensus_767#0
CCGGCTATATGATACAGCAGCAGAAGCTCGACTCGTACATCCTCAGTCAGCGGGTGCGCA
ATCTGCAGCGGGCTCGCTTCCAGGAGCGAAAGGTGCTCTTCTACTTCGACTATCTGGATA
ACGATTATGTTTGTGTGAACTTTACACTGGAACGATGGATGCCGGTAGCCAACATGTCAC
GCTACCTACCGATCCGTGTGTACGATTACTACGCGCCAGAACGCTTCAATGAGACCATCT
TCGATTCGCTGCAAACCTACCTGCTGAACATCTGCGAAGTGTGCGGCAGCTCGCAGTGCC
CGTACTGCTCGATCTACAACATTGCCGTCCGCTTCCCGGGCTCGATCGTGCTGATGCTGC
TGACCGGCATCGTGCTCGTGGCCCGCCACTACCGAATAGTCAATCCAAATGGGTGGATTT
TCCTCAACGATTAATATCGCGATCGAAGAAGCGCAAACTGTGTAAATATACAAACAACAA
ACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCA
TTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGAATCTCCTTATATCAATAC

consensusID : consensus_767#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence

                              [GAGGCAGAATCGNGCACGAGGNGTAAATATACAAACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGTAATCGTCCNTTATATCGAATTACTTGGTTGCGGTCCGTGTGTATGTTGTGTAATTGCTAGGTAGAGGTAGTTAGTACGGTNGNANTCGTTTGTGTTAAGCTAGTTTTTAGGGGGTTAAGTAGGACACAGCGTTTAGACCAGACGAGCANCCGATCCAGATCGATCACCGTTCCTGGCCAGGCCCAGTTTCGAAGAAGGGAACACGAAGAGTATCTATATNAGGTTATGTGGAGANATACGGGGAAANAATACACACGAGGGGGAGTTAGAGTTCCGAAANAGCGTNTGGAAATCCGAAAGTTCNAACCAGAAGGTTGTGTNGAGTAANCCAAGCAAGCCAGGGTGGATAANGAAAGGANAGAAAACCAAGGGAGNAAACCACAAGCAGANCGGTTGTGTTGTCCGGCTGTGGCCGTAAGCTTCCTTGGGNGCACGCACTT]

[+] EMBL BX467997             [GAGGCAGAATCGNGCACGAGGNGTAAATATACAAACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGTAATCGTCCNTTATATCGAATTACTTGGTTGCGGTCCGTGTGTATGTTGTGTAATTGCTAGGTAGAGGTAGTTAGTACGGTNGNANTCGTTTGTGTTAAGCTAGTTTTTAGGGGGTTAAGTAGGACACAGCGTTTAGACCAGACGAGCANCCGATCCAGATCGATCACCGTTCCTGGCCAGGCCCAGTTTCGAAGAAGGGAACACGAAGAGTATCTATATNAGGTTATGTGGAGANATACGGGGAAANAATACACACGAGGGGGAGTTAGAGTTCCGAAANAGCGTNTGGAAATCCGAAAGTTCNAACCAGAAGGTTGTGTNGAGTAANCCAAGCAAGCCAGGGTGGATAANGAAAGGANAGAAAACCAAGGGAGNAAACCACAAGCAGANCGGTTGTGTTGTCCGGCTGTGGCCGTAAGCTTCCTTGGGNGCACGCACTT]




>consensus_767#1
GAGGCAGAATCGNGCACGAGGNGTAAATATACAAACAACAAACCTTTCCCCACTTTTGGA
TTCCTCCCTACGCTTCCGCCGGGGGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCA
CAGAATATCGAATGAGCGAGTAATCGTCCNTTATATCGAATTACTTGGTTGCGGTCCGTG
TGTATGTTGTGTAATTGCTAGGTAGAGGTAGTTAGTACGGTNGNANTCGTTTGTGTTAAG
CTAGTTTTTAGGGGGTTAAGTAGGACACAGCGTTTAGACCAGACGAGCANCCGATCCAGA
TCGATCACCGTTCCTGGCCAGGCCCAGTTTCGAAGAAGGGAACACGAAGAGTATCTATAT
NAGGTTATGTGGAGANATACGGGGAAANAATACACACGAGGGGGAGTTAGAGTTCCGAAA
NAGCGTNTGGAAATCCGAAAGTTCNAACCAGAAGGTTGTGTNGAGTAANCCAAGCAAGCC
AGGGTGGATAANGAAAGGANAGAAAACCAAGGGAGNAAACCACAAGCAGANCGGTTGTGT
TGTCCGGCTGTGGCCGTAAGCTTCCTTGGGNGCACGCACTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_767#0      CCGGCTATATGATACAGCAGCAGAAGCTCGACTCGTACATCCTCAGTCAGCGGGTGCGCA 60
consensus_767#1      -----------------------GAGGCAGAATCGNGCA----CGAGGNGTAAATATACA 33
                                             **   ** ***  **    *     *    *   **

consensus_767#0      ATCTGCAGCGGGCTCGCTTCCAGGAGCGAAAGGTGCTCTTCTACTTCGACTATCTGGATA 120
consensus_767#1      A---ACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGGGGAGAGG 90
                     *    ** *   *      ***     * *     * ** *   * ** *      **  

consensus_767#0      A--CGATTATGTTTGTGTGAACTTTACAC-TGGAACGATGGATG--CCGGTAG----CCA 171
consensus_767#1      AATTGATTCCATTCAAGCAAAAAACAATCACAGAATATCGAATGAGCGAGTAATCGTCCN 150
                     *   ****   **   *  **    *  *   ***    * ***  *  ***     ** 

consensus_767#0      ACATGTCACGCTACCTAC---CGATCCGTGTGTACG----ATTACTACGCGCCAGAACGC 224
consensus_767#1      TTATATCGAATTACTTGGTTGCGGTCCGTGTGTATGTTGTGTAATTGCTAGGTAGAGGTA 210
                       ** **    *** *     ** ********** *     * * * *  *  ***    

consensus_767#0      TTCAATGAGACCATCTTCGATTCGCTGCAAACCTACCTGCTGAACATCTGCGAAGTGTGC 284
consensus_767#1      GTTAGTACGGTNGNANTCGTTT--GTGTTAAGCTAGTTTTTAGGGGGTTAAGTAGGACAC 268
                      * * *  *       *** **   **  ** ***  *  *       *  * **    *

consensus_767#0      GGCAGCTCGCAGTGCCCGTACTGCTCGATCTACAAC-ATTGCCGTCCGCTTCCCGGGCTC 343
consensus_767#1      AGC-GTTTAGACCAGACGAGCANC-CGATCCAGATCGATCACCGTTC-CTGGCCAGGCCC 325
                      ** * *   *     **  *  * ***** * * * **  **** * **  ** *** *

consensus_767#0      GATCGTGCTGATGCTGCTGACCGGCATCGTGCTCGTGGCCCGCCACTACCGAATAGTCAA 403
consensus_767#1      AGTT---TCGAAGAAGGGAACACGAAGAGTATCTATATNAGGTTA-TGTGGAGANAT--- 378
                       *      ** *  *   **  * *  **     *     *  * *   **    *   

consensus_767#0      TCCAAATGGGTGGATTTTCCTCAACGATTAATATCGCGATCGAAGAAGCGCA-AACTGTG 462
consensus_767#1      ---ACGGGGAAANAATACACACGAGGGGGAGTTAGAGTTCCGAAANAGCGTNTGGAAATC 435
                        *   **    * *   * * * *   * *        ****  ****        * 

consensus_767#0      TAAATATACAAACAACAAACCTTTCCCCACTTTTGGATTCCTCCCTACGCTTCCGCCGGG 522
consensus_767#1      CGAAAGTTCNAACCAGAAGGTTGTGTNGAGTAANCCAAGCAAGCCAGGGTGGATAANGAA 495
                       **  * * *** * **   * *    * *     *  *   **   *        *  

consensus_767#0      -GGAGAGGAATTGATTCCATTCAAGCAAAAAACAATCA--CAGAATATCGAA---TGAGC 576
consensus_767#1      AGGANAGAAAACCAAGGGAGNAAACCACAAGCAGANCGGTTGTGTTGTCCGGCTGTGGCC 555
                      *** ** **   *    *   ** ** **    * *        * **      **  *

consensus_767#0      GAGAATCTCCTTATATCAATAC---- 598
consensus_767#1      GTAAGCTTCCTTGGGNGCACGCACTT 581
                     *  *   *****      *  *