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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7675#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1275 fasta sequence
[ACGCAACGATAAGCAGCCAGCCACAAGCAACCGAAAAGGCAGCGCTGCCGGCGCCACACAGTGAAGGCAACAGCTTCTCAGCGCAAGATTAAGCAAAACGTGAAAGTTGCAACGAAGTAATTGATTTATTGCAACCAGCTACAAAAGAAAGAGGGCAGTTTTGTTCAATTGTTTAAAAAAGCGGTAAAAAACTGTTTATTTTTTTTAAAGAGTGTAACAAGTGTGAAGTGACAGCATTGAAACAGGCATCGAAAGTGAGTTAAAAGCATCGATGCATCTTACATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCATTGCAGCAAAAGATACGGCAAAGACAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGTGTTTGTGTGTTTCCACTGACTACAACGGTGATTGTTCTTGGAA--GCGGGAAAGCAAACGCAGCGTCACCTCAGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAGAAAGCCTACTACACACTGCACGCACGTAAAACGCACCGGAAGGACACGCGGAGCAGTACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCGCCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAGAACCGGAAGCG-CCGGCCGAGATCTACAACGAGCTGGCGGAGGAGTTTCAGCGGCTGCACAACCAGGAGATACGCTTCCTGCAGTATCTGAGCGTGCAGGCGGAGCGGCAGCAGCGCGAAGAAGCCTACCTTCAGGCGCAGCGCGAACAGCAGCAGCTTGCGCTAGACGTGCGCAGCAGCAGCAACACCAACGCGCTGCTAGACGATGCCGGCTCGCTGCTCGATGATTTACCGCAGGAGTACGGACGGGCCGAGGAGGCGGCCAACAGTTCGGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAACCGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAATGATAAGAAAAATAATCACTATATGTCCTTGTGTCACTTCAAGCTGTGCAACATGGGCCGTAAGCGCAATCAACGATATCCTCAATTCTGGAACTAAACGGTGAACGAGCGCTGACAAAACCAGAACGACACTTCTATGTACAACGAAACAGCAAACTAAACACAAAAAAACACGCTTCCCCGGAAAAGACATTCCACGGGTGGCCAACCGGATCGGGGGACATTCCAATCCGCTCGATGATAGAGAAC]
[+] EMBL BX606058 [ACGCAACGATAAGCAGCCAGCCACAAGCAACCGAAAAGGCAGCGCTGCCGGCGCCACACAGTGAAGGCAACAGCTTCTCAGCGCAAGATTAAGCAAAACGTGAAAGTTGCAACGAAGTAATTGATTTATTGCAACCAGCTACAAAAGAAAGAGGGCAGTTTTGTTCAATTGTTTAAAAAAGCGGTAAAAAACTGTTTATTTTTTTTAAAGAGTGTAACAAGTGTGAAGTGACAGCATTGAAACAGGCATCGAAAGTGAGTTAAAAGCATCGATGCATCTTACATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCATTGCAGCAAAAGATACGGCAAAGACAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGTGTTTGTGTG ]
[+] EMBL AGA282653 [ ACACAGTGAAGGCAACAGCTTCTCAGCGCAAGATTAAGCAAAACGTGAAAGTTGCAACGAAGTAATTGATTTATTGCAACCAGCTACAAAAGAAAGAGGGCAGTTTTGTTCAATTGTTTAAAAAAGCGGTAAAAAACTGTTTATTTTTTTTAAAGAGTGTAACAAGTGTGAAGTGACAGCATTGAAACAGGCATCGAAAGTGAGTTAAAAGCATCGATGCATCTTACATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCATTGCAGCAAAAGATACGGCAAAGACAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGTGTTTGTGTGTTTCCACTGACTACAACGGTGATTGTTCTTGGAA GCGGGAAAGCAAACGCAGCGTCACCTCAGGTGGAC ]
[+] EMBL AGA285492 [ AGAGCAAGTGTTTGTGTGTTTCCACTGACTACAACGGTGATTGTTCTTGGAA GCGGGAAAGCAAACGCAGCGTCACCTCAGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAGAAAGCCTACTACACACTGCACGCACGTAAAACGCACCGGAAGGACACGCGGAGCAGTACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCGCCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAGAACCGGAAGCG CCGGCCGAGATCTAC ]
[+] EMBL BX607818 [ AACGGTGATTGTTCTTGGAACTGCGGGAAAGCAAACGCAGCGTCACCTCAGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAGAAAGCCTACTACACACTGCACGCACGTAAAACGCACCGGAAGGACACGCGGAGCAGAGCAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCGCCATTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAGAACCGGAAGCG CCGGCCGAGATCTACAACGAGCTGGCGGAGGAGTTTCAGCGGCTGCACAACCAGGAGATACGCTTCCTGCAGTATCTGAGCGTGCAGGCGGAGCGGCAGCAGCGCGAAGAAGCCTACCTTCAGGCGCAGCGCGAACAGCAGCAGCTTGCGCTAGACGTACGCAGCAGCAG CAACGCGCTGCTAGACGATGCCGGCTCGCTCCTCGACGACATACCGCAGGAGTACGGACGGGCCGAGGAGGCGGCCAACAGTTCTGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAACCGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAATGATAAGAAAAATAATCACTATATGTCCTTGTGTCACTTCAAGCTGTGCAACATGGGCCGTAAGCGCAATCAACGATATCCTCAATTCTGGAACTAAACGGTGAACGAGCGCTGACAAAACCAGAACGACACTTCTATGTACAACGAAACAGCAAACTAAACACAAAAAAACACGCTTCCCCGGAAAAGACATTCCACGGGTGGCCAACCGGATCGGGGGACATTCCAATCCGCTCGATGATAGAGAAC]
[-] EMBL AGA281025 [ TTGGACGCTGATCGTGCTGGTGGCGGTCGCCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAGAACCGGAAGCG CCGGCCGAGATCTACAACGAGCTGGCGGAGGAGTTTCAGCGGCTGCACAACCAGGAGATACGCTTCCTGCAGTATCTGAGCGTGCAGGCGGAGCGGCAGCAGCGCGAAGAAGCCTACCTTCAGGCGCAGCGCGAACAGCAGCAGCTTGCGCTAGACGTGCGCAGCAGCAGCAACACCAACGCGCTGCTAGACGATGCCGGCTCGCTGCTCGATGATTTACCGCAGGAGTACGGACGGGCCGAGGAGGCGGCCAACAGTTCGGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAACCGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAAaaa ]
[-] EMBL AGA281487 [ CGGTACTGGCCCGCCCGCTAGAACCGGAAGCGCCCGGCCGAGATCTACAACGAGCTGGCGGAGGAGTTTCAGCGGCTGCACAACCAGGAGATACGCTTCCTGCAGTATCTGAGCGTGCAGGCGGAGCGGCAGCAGCGCGAAGAAGCCTACCTTCAGGGGCAGCGCGAACAGCAGCAGCTTGCGCTAGACGTGCGCAGCAGCAGCAACACCAACGCGCTGCTAGACGATGCCGGCTCGCTGCTCGATGATTTACCGCAGGAGTACGGACGGGCCGAGGAGGCGGCCAACAGTTCGGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAACCGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAAaaaa ]
[-] EMBL AGA284195 [ GCTCGATGATTTACCGCAGGAGTACGGACGGGCCGAGGAGGCGGCCAACAGTTCGGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAACCGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAATGATAAGAAAAATAATCACTATATGTCCTTGTGTCACTTCAAGCTGTGCAACATGGGCCGTAAGCGCAATCAACGATATCCTCAATTCTGGAACTAAACGGTGAACGAGCGCTGACAAAACCAGAACGACACTTTTATGTACAACGAAACAGCAAACTAAAAAAAA ]
consensusID : consensus_7675#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[CCGCCCACGCGTCCGCGCTTCGCTACGCAACGATAAGCAGCCAGCCACAAGCAACCGGAAAGGCAGCGCTGCCGGCGCCACACATCTCAGCGCAAGATTAAGCAAAACGTGAAAGTTGCAACGAAGTAATTGATTAATTGCAACTAGCAACAAAAGAAAAAGGGCAGTTTTGTTCAATTGTTTAAAAAAGCGGTGAAAAGGAGTTTTTTTGTATAAAAGTGTGACAAGTGTGAAGTGACAGCATTGAAACCGGCATCGAAAGTGAGTTAAAAGCACCGATGCATCTTATATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCTTTGCAGCAAAAGATACGGCAAAGATAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGTGTTTGTGTGTTTCCACTGACTAAAACGGTGATTGTTCTTGGAACTGCGGGAAAGCAAACGCAGCGTCACCGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAGAAAAGCCTACTTACTACACACTGCACGCGCGTAAAACGCACCGGAAGGACACGCGGAGCAGAACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCGCCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAG]
[+] EMBL BM634773 [CCGCCCACGCGTCCGCGCTTCGCTACGCAACGATAAGCAGCCAGCCACAAGCAACCGGAAAGGCAGCGCTGCCGGCGCCACACATCTCAGCGCAAGATTAAGCAAAACGTGAAAGTTGCAACGAAGTAATTGATTAATTGCAACTAGCAACAAAAGAAAAAGGGCAGTTTTGTTCAATTGTTTAAAAAAGCGGTGAAAAGGAGTTTTTTTGTATAAAAGTGTGACAAGTGTGAAGTGACAGCATTGAAACCGGCATCGAAAGTGAGTTAAAAGCACCGATGCATCTTATATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCTTTGCAGCAAAAGATACGGCAAAGATAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGTGTTTGTGTGTTTCCACTGACTAAAACGGTGATTGTTCTTGGAACTGCGGGAAAGCAAACGCAGCGTCACCGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAGAAAAGCCTACTTACTACACACTGCACGCGCGTAAAACGCACCGGAAGGACACGCGGAGCAGAACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCGCCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7675#0 ------------------------ACGCAACGATAAGCAGCCAGCCACAAGCAACCGAAA 36
consensus_7675#1 CCGCCCACGCGTCCGCGCTTCGCTACGCAACGATAAGCAGCCAGCCACAAGCAACCGGAA 60
********************************* **
consensus_7675#0 AGGCAGCGCTGCCGGCGCCACACAGTGAAGGCAACAGCTTCTCAGCGCAAGATTAAGCAA 96
consensus_7675#1 AGGCAGCGCTGCCGGCGCCACACA---------------TCTCAGCGCAAGATTAAGCAA 105
************************ *********************
consensus_7675#0 AACGTGAAAGTTGCAACGAAGTAATTGATTTATTGCAACCAGCTACAAAAGAAAGAGGGC 156
consensus_7675#1 AACGTGAAAGTTGCAACGAAGTAATTGATTAATTGCAACTAGCAACAAAAGAAAAAGGGC 165
****************************** ******** *** ********** *****
consensus_7675#0 AGTTTTGTTCAATTGTTTAAAAAAGCGGTAAAAAACTGTTTATTTTTTTTAAAGAGTGTA 216
consensus_7675#1 AGTTTTGTTCAATTGTTTAAAAAAGCGGTGAAAAGGAGTT--TTTTTGTATAAAAGTGTG 223
***************************** **** *** ***** * ** *****
consensus_7675#0 ACAAGTGTGAAGTGACAGCATTGAAACAGGCATCGAAAGTGAGTTAAAAGCATCGATGCA 276
consensus_7675#1 ACAAGTGTGAAGTGACAGCATTGAAACCGGCATCGAAAGTGAGTTAAAAGCACCGATGCA 283
*************************** ************************ *******
consensus_7675#0 TCTTACATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCATTGCAGCAAAAGATA 336
consensus_7675#1 TCTTATATGGACGATTGTGTGAACAGTGTGTGCATTGGAAACGCTTTGCAGCAAAAGATA 343
***** ************************************** ***************
consensus_7675#0 CGGCAAAGACAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGT 396
consensus_7675#1 CGGCAAAGATAGTGAAACTGACCATCATTTTCAAACTCAACTCTAAAATCGAGAGCAAGT 403
********* **************************************************
consensus_7675#0 GTTTGTGTGTTTCCACTGACTACAACGGTGATTGTTCTTGGAA--GCGGGAAAGCAAACG 454
consensus_7675#1 GTTTGTGTGTTTCCACTGACTAAAACGGTGATTGTTCTTGGAACTGCGGGAAAGCAAACG 463
********************** ******************** ***************
consensus_7675#0 CAGCGTCACCTCAGGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAG 514
consensus_7675#1 CAGCGTCACC---GGTGGACTCAGCAGCGCTGGTTCTATTCGCTTGCGCCCCGAAGCTAG 520
********** ***********************************************
consensus_7675#0 AAAG-----CCTACTACACACTGCACGCACGTAAAACGCACCGGAAGGACACGCGGAGCA 569
consensus_7675#1 AAAAGCCTACTTACTACACACTGCACGCGCGTAAAACGCACCGGAAGGACACGCGGAGCA 580
*** * ***************** *******************************
consensus_7675#0 GTACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCG 629
consensus_7675#1 GAACAACTACTACTACAACAATGATTACCCATTGGACGCTGATCGTGCTGGTGGCGGTCG 640
* **********************************************************
consensus_7675#0 CCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAGAACCGGAAGCGCCGGCCGAGA 689
consensus_7675#1 CCGTTGCCGGGCCGTGCACGGTACTGGCCCGCCCGCTAG--------------------- 679
***************************************
consensus_7675#0 TCTACAACGAGCTGGCGGAGGAGTTTCAGCGGCTGCACAACCAGGAGATACGCTTCCTGC 749
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 AGTATCTGAGCGTGCAGGCGGAGCGGCAGCAGCGCGAAGAAGCCTACCTTCAGGCGCAGC 809
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 GCGAACAGCAGCAGCTTGCGCTAGACGTGCGCAGCAGCAGCAACACCAACGCGCTGCTAG 869
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 ACGATGCCGGCTCGCTGCTCGATGATTTACCGCAGGAGTACGGACGGGCCGAGGAGGCGG 929
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 CCAACAGTTCGGGGCGCAATCTGAACGGATACGGGCACGAGAGCGTCACCCAGAGCGAAC 989
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 CGGTGCAGAAGGAGATTCCGCACCAGAAGAGCAAAAATGATAAGAAAAATAATCACTATA 1049
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 TGTCCTTGTGTCACTTCAAGCTGTGCAACATGGGCCGTAAGCGCAATCAACGATATCCTC 1109
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 AATTCTGGAACTAAACGGTGAACGAGCGCTGACAAAACCAGAACGACACTTCTATGTACA 1169
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 ACGAAACAGCAAACTAAACACAAAAAAACACGCTTCCCCGGAAAAGACATTCCACGGGTG 1229
consensus_7675#1 ------------------------------------------------------------
consensus_7675#0 GCCAACCGGATCGGGGGACATTCCAATCCGCTCGATGATAGAGAAC 1275
consensus_7675#1 ----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||