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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7685#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 830 fasta sequence
[CCGCAAAATCAACTAAATATCTGCAGGAAGTGGAGTGGATGTTGCTTTCTTAGAATTACATCAAGATTAAGCGGATCCAACAAGGGGGGAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCCGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCGCAAGAAGCGCCGAAAGCAGTACACGCGTATCAATTTCTACCGCACGCCGCAAACGATGATTCGCATCAACTCGATCGACATTAAGCGAAAGCTGAGCGATTCGGCGAGTGCGGAAGCCGCTGGGGAGGAACGGTTTTTCTAGCTTAAAAGCTTTGAAAAGGGGCTCATATGCAGTTAATAAATAGATCACCAAACTATTACAAAAAA]
[+] EMBL BM630300 [CCGCAAAATCAACTAAATATCTGCAGGAAGTGGAGTGGATGTTGCTTTCTTAGAATTACATCAAGATTAAGCGGATCCAACAAGGGGGGAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCCGGT ]
[+] EMBL BX606031 [ AGTGGAGTGGATGTTGCTTTCTTAGAATTACATCAAGATTAAGCGGATCCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCCGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTC ]
[+] EMBL BX627437 [ CGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCCGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCGCAAGAAGCGCCGAAAGCAGTACACGCGTATCAATTTCTACCGCACGCCGCAAACGATGATTCGCATCAACTCGATCGACATTAAGCGAAAGCTGAGCGATTCGGCGAGTGCGGAAGCCGCTGGGGAGGAACGGTTTTTCTAGCTTAAAAGCTTTGAAAAGGGGCTCATATGCAGTTAATAAATAGATCACCA ]
[+] EMBL BX623842 [ CGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGTCAACTAGCCGGGTTGCTGAAACCCTCAACACTAAACACACTGATCGAACCCCTTAAAATTGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCCGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCAGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTGGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCGCAAGAAGCGCCGAAAGCAGTACACGCGTATCAATTTCTACCGCACGCCGCAAACGATGATTCGCATCAACTCGATCGACATTAAGCGAAAGCTGAGCGATTCGGCGAGTGCGGAAGCCGCTGGGGAGGAACGGTTTTTCTAGCTTGAAAGCTTTGCAAAGGGGCTCATATGCAGTTAATAAATAGATCACC ]
[+] EMBL BM601435 [ CGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCCGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGGCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCG ]
[-] EMBL AGA280974 [ GGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCGCAAGAAGCGCCGAAAGCAGTACACGCGTATCAATTTCTACCGCACGCCGCAAACGATGATTCGCATCAACTCGATCGACATTAAGCGAAAGCTGAGCGATTCGGCGAGTGCGGAAGCCGCTGGGGAGGAACGGTTTTTCTAGCTTAAAAGCTTTGAAAAGGGGCTCATATGCAGTTAATAAATAGATCACCAAACTATTACAAAAAA]
consensusID : consensus_7685#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTCGTGCTCCAAAAAACAATTTAAGAAAAGCCAATAAATTCAATTTGTTATTTCGTTTCCTCCCTAGGAAGTGGAGTGGATATTGCTTTCTTAGAACTACATCAAGATTAAGCGGATCCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGTCAACTAGCCGGGTTGCTGAAACCCTCAACACTAAACACACTGATCGAACCCCTTAAAATTGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCCGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCAGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTGGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCG]
[+] EMBL BM595144 [CCGCGGACGCGTGGGCGGACGCGTGGGTCGTGCTCCAAAAAACAATTTAAGAAAAGCCAATAAATTCAATTTGTTATTTCGTTTCCTCCCTAGGAAGTGGAGTGGATATTGCTTTCTTAGAACTACATCAAGATTAAGCGGATCCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGTCAACTAGCCGGGTTGCTGAAACCCTCAACACTAAACACACTGATCGAACCCCTTAAAATTGTACCACTTACCTCAAGGTGGAGTAACCCGTCCGCCGCATTTGCAAACCATCGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACCGTAAACAAGCAGCTAGAGACGGGATCCGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGCGGCAAGCAGTTCAAAATCACTTCAGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCGGAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCGCTGATCGGCCGTCCCCTGCTGACACCCGGTCTGGTCGATGTGCAGGCTACCATCATCGAGAAGACGCTCTCCCACACACGCACACACTTCCG]
consensusID : consensus_7685#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 538 fasta sequence
[CAGATCCCCCGAGTTAAAGTGGAGTGGATGTTGCTTTCTTAGATACATCAAGATTAAGCGGATCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCCGTCCGCCGGCATTTTGGCAAAACCCAATTCCGATTGGGAAGGCCAGCTCCCAAGGCCGCTGTTAAGGCTTCCCGGCTTCCGGCCGACACCAAAAAGCACCACTTGAAGGACCGTTAAAACNAAAGGCAAGGGNCTTTAAGACGAAAGCNACCCCGGGGGGAATTCCGGCGGAAAGAGCGGGGCCCGGAACCTGGTTCTGGCGGGTGGTGCAGCTTGTGCGGCAAGCCAGTTCCACAGACATCACTTCCCCGGTTGGGANTCACTTTTCACTTCCCGNGGTNC]
[+] EMBL AL695182 [CAGATCCCCCGAGTTAAAGTGGAGTGGATGTTGCTTTCTTAGATACATCAAGATTAAGCGGATCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGATCCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTTTCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCTTAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCCGTCCGCCGGCATTTTGGCAAAACCCAATTCCGATTGGGAAGGCCAGCTCCCAAGGCCGCTGTTAAGGCTTCCCGGCTTCCGGCCGACACCAAAAAGCACCACTTGAAGGACCGTTAAAACNAAAGGCAAGGGNCTTTAAGACGAAAGCNACCCCGGGGGGAATTCCGGCGGAAAGAGCGGGGCCCGGAACCTGGTTCTGGCGGGTGGTGCAGCTTGTGCGGCAAGCCAGTTCCACAGACATCACTTCCCCGGTTGGGANTCACTTTTCACTTCCCGNGGTNC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7685#0 ---------------------------------------------------------CCG 3
consensus_7685#1 CCGCGGACGCGTGGGCGGACGCGTGGGTCGTGCTCCAAAAAACAATTTAAGAAAAGCCAA 60
consensus_7685#2 ------------------------------------------------------------
consensus_7685#0 CAAAATCAACTAAATATCTG----------CAGGAAGTGGAGTGGATGTTGCTTTCTTAG 53
consensus_7685#1 TAAATTCAATTTGTTATTTCGTTTCCTCCCTAGGAAGTGGAGTGGATATTGCTTTCTTAG 120
consensus_7685#2 ----------CAGATCCCCCGA--------GTTAAAGTGGAGTGGATGTTGCTTTCTTAG 42
* ************* ************
consensus_7685#0 AATTACATCAAGATTAAGCGGATCCAACAAGGGGGGAGTAATACCGGGCCGAAAGCTGAT 113
consensus_7685#1 AACTACATCAAGATTAAGCGGATCCAACAAGGGTGCAGTAATACCGGGCCGAAAGCTGAT 180
consensus_7685#2 A--TACATCAAGATTAAGCGGATC-AACAAGGGTGCAGTAATACCGGGCCGAAAGCTGAT 99
* ********************* ******** * ************************
consensus_7685#0 CCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTT 173
consensus_7685#1 CCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTT 240
consensus_7685#2 CCGGAGTGTGCCGGAACCAAACAGACCGTAAAGAAGGGAACAAAACACTTCCGCAATGTT 159
************************************************************
consensus_7685#0 TCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCT 233
consensus_7685#1 TCTTCGTCAACTAGCCGGGTTGCTGAAACCCTCAACACTAAACACACTGATCGAACCCCT 300
consensus_7685#2 TCTTCGCCAACTAGCCGGGTTGTTGAAACCCTCAACCCTAAACACACTGATTGAACCCCT 219
****** *************** ************* ************** ********
consensus_7685#0 TAAAATCGTACCACTTACCTCAAGGTGGAGTAACCC-GTCCGCCG-CATTTGCAAACCAT 291
consensus_7685#1 TAAAATTGTACCACTTACCTCAAGGTGGAGTAACCC-GTCCGCCG-CATTTGCAAACCAT 358
consensus_7685#2 TAAAATCGTACCACTTACCTCAAGGTGGAGTAACCCCGTCCGCCGGCATTTTGGCAAAAC 279
****** ***************************** ******** ***** * *
consensus_7685#0 CGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACC 351
consensus_7685#1 CGATGGAGCAGCTCCAGCGCTGTAGCTCCGCTCGCCGACACCAAAAGCACACTTGAGACC 418
consensus_7685#2 CCA--ATTCCGATTGGGAAGGCCAGCTCCCAAGGCCGCTGTTAAGGCTTCCC----GGCT 333
* * * * * * ****** **** ** * * * *
consensus_7685#0 GTAAACAAGCAGCTAGAGACGGGATCGGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGC 411
consensus_7685#1 GTAAACAAGCAGCTAGAGACGGGATCCGAAGGGCGACTGTTTGCGGTGGTGCAGCTGTGC 478
consensus_7685#2 TCCGGCCGACACCAAAAAGCACCACTTGAAGG---ACCGTT---AAAACNAAAGGCAAGG 387
* ** * * * * * ***** ** *** ** *
consensus_7685#0 GGCAAGCAGTTCAAAATCACTTCCGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCG 471
consensus_7685#1 GGCAAGCAGTTCAAAATCACTTCAGGTGATATTATCGTCGTTGAAGGCTACTGGCCACCG 538
consensus_7685#2 GNCTTTAAGACGAAAGCNACCCCGGGGGGAATT-CCGGCGGAAAGAGC----GGGGCCCG 442
* * ** *** ** * ** * *** ** ** * ** ** ***
consensus_7685#0 GAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCG 531
consensus_7685#1 GAGGGTGGCGATCGTTTGCGGCTGGATAAGGTGCTGCTAGCGGGTAGCAAGGACTTTTCG 598
consensus_7685#2 GAACCTGG-------TTCTGGCGGGT---GGTGCAGCTTGT--GCGGCAAGCCAGTTCCA 490
** *** ** *** ** ***** *** * * ***** ** *
consensus_7685#0 CTGATCGGCCGTCCCCTGCTGACACCCGGTCTAGTCGATGTGCAGGCTACCATCATCGAG 591
consensus_7685#1 CTGATCGGCCGTCCCCTGCTGACACCCGGTCTGGTCGATGTGCAGGCTACCATCATCGAG 658
consensus_7685#2 CAGACATCACTTCCCCGGTTGGGANTCACTTT--TCACTTCCCGNGGTNC---------- 538
* ** * ***** * ** * * * * ** * * * * *
consensus_7685#0 AAGACGCTCTCCCACACACGCACACACTTCCGCAAGAAGCGCCGAAAGCAGTACACGCGT 651
consensus_7685#1 AAGACGCTCTCCCACACACGCACACACTTCCG---------------------------- 690
consensus_7685#2 ------------------------------------------------------------
consensus_7685#0 ATCAATTTCTACCGCACGCCGCAAACGATGATTCGCATCAACTCGATCGACATTAAGCGA 711
consensus_7685#1 ------------------------------------------------------------
consensus_7685#2 ------------------------------------------------------------
consensus_7685#0 AAGCTGAGCGATTCGGCGAGTGCGGAAGCCGCTGGGGAGGAACGGTTTTTCTAGCTTAAA 771
consensus_7685#1 ------------------------------------------------------------
consensus_7685#2 ------------------------------------------------------------
consensus_7685#0 AGCTTTGAAAAGGGGCTCATATGCAGTTAATAAATAGATCACCAAACTATTACAAAAAA 830
consensus_7685#1 -----------------------------------------------------------
consensus_7685#2 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||